| Literature DB >> 29392890 |
Dorien Schepers1, Giada Tortora2,3, Hiroko Morisaki4,5,6, Gretchen MacCarrick7, Mark Lindsay8, David Liang9, Sarju G Mehta10, Jennifer Hague10, Judith Verhagen11, Ingrid van de Laar11, Marja Wessels11, Yvonne Detisch12, Mieke van Haelst13,14, Annette Baas13, Klaske Lichtenbelt13, Kees Braun15, Denise van der Linde16, Jolien Roos-Hesselink16, George McGillivray17, Josephina Meester1, Isabelle Maystadt18, Paul Coucke19, Elie El-Khoury20, Sandhya Parkash21, Birgitte Diness22, Lotte Risom22, Ingrid Scurr23, Yvonne Hilhorst-Hofstee24, Takayuki Morisaki4,5, Julie Richer25, Julie Désir26, Marlies Kempers27, Andrea L Rideout28, Gabrielle Horne29, Chris Bennett30, Elisa Rahikkala31, Geert Vandeweyer1, Maaike Alaerts1, Aline Verstraeten1, Hal Dietz7, Lut Van Laer1, Bart Loeys1,27.
Abstract
The Loeys-Dietz syndrome (LDS) is a connective tissue disorder affecting the cardiovascular, skeletal, and ocular system. Most typically, LDS patients present with aortic aneurysms and arterial tortuosity, hypertelorism, and bifid/broad uvula or cleft palate. Initially, mutations in transforming growth factor-β (TGF-β) receptors (TGFBR1 and TGFBR2) were described to cause LDS, hereby leading to impaired TGF-β signaling. More recently, TGF-β ligands, TGFB2 and TGFB3, as well as intracellular downstream effectors of the TGF-β pathway, SMAD2 and SMAD3, were shown to be involved in LDS. This emphasizes the role of disturbed TGF-β signaling in LDS pathogenesis. Since most literature so far has focused on TGFBR1/2, we provide a comprehensive review on the known and some novel TGFB2/3 and SMAD2/3 mutations. For TGFB2 and SMAD3, the clinical manifestations, both of the patients previously described in the literature and our newly reported patients, are summarized in detail. This clearly indicates that LDS concerns a disorder with a broad phenotypical spectrum that is still emerging as more patients will be identified. All mutations described here are present in the corresponding Leiden Open Variant Database.Entities:
Keywords: Loeys-Dietz syndrome; SMAD2; SMAD3; TGFB2; TGFB3; aneurysm
Mesh:
Substances:
Year: 2018 PMID: 29392890 PMCID: PMC5947146 DOI: 10.1002/humu.23407
Source DB: PubMed Journal: Hum Mutat ISSN: 1059-7794 Impact factor: 4.878
Previously described and novel SMAD3 gene mutations
| Exon | c‐Notation | p‐Notation | Domain | Reference | Times reported | Effect |
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| 1 | c.2T > C | p.Met1Thr | MH1 | Haller et al. ( | 1 | Pathogenic |
| 1 | c.3G > A | p.Met1Ile | MH1 | Fitzgerald et al. ( | 1 | Pathogenic |
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| 2 | c.266G > A | p.Cys89Tyr | MH1 | Zhang et al. ( | 1 | Pathogenic |
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| 2 | c.281G > T | p.Trp94Leu | MH1 | Blinc et al. ( | 1 | VUS |
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| 2 | c.313delG | p.Ala105Profs*11 | MH1 | van de Laar et al. ( | 1 | Pathogenic |
| 2 | c.335C > T | p.Ala112Val | MH1 | (Regalado et al., | 1 | Likely pathogenic |
| 2 | c.370C > A | p.Pro124Thr | MH1 | (Garcia‐Bermudez et al., | 1 | VUS |
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| 3 | c.401_405dup | p.Pro136Phefs*52 | MH1 | (Berthet et al., | 1 | Pathogenic |
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| 4 | c.539_540insC | p.Pro180Thrfs*7 | Linker | (van de Laar et al., | 2 | Pathogenic |
| 4 | c.546delT | p.Gly183Alafs*3 | Linker | (Campens et al., | 1 | Pathogenic |
| 4 | c.584_585insTC | p.Gln195Hisfs*3 | Linker | (Campens et al., | 1 | Pathogenic |
| 5 | c.652delA | p.Asn218Thrfs*23 | Linker | (Regalado et al., | 1 | Pathogenic |
| 6 | c.668delC | p.Pro223Glnfs*18 | Linker | (Aubart et al., | 1 | Pathogenic |
| 6 | c.715G > A | p.Glu239Lys | MH2 | (Regalado et al., | 4 | Pathogeic |
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| 6 | c.733G > A | p.Gly245Arg | MH2 | (Aubart et al., | 1 | Likely pathogenic |
| 6 | c.741_742delAT | p.Thr247Profs*61 | MH2 | (van de Laar et al., | 1 | Pathogenic |
| 6 | c.742T > C | p.Phe248Leu | MH2 | (Aubart et al., | 1 | Likely pathogenic |
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| 6 | c.782C > T | p.Thr261Ile | MH2 | (van de Laar et al., | 1 | Pathogenic |
| 6 | c.788C > T | p.Pro263Leu | MH2 | (van de Laar et al., | 1 | VUS |
| 6 | c.797C > A | p.Ser266* | MH2 | (Haller et al., | 1 | Pathogenic |
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| 6 | c.836G > A | p.Arg279Lys | MH2 | (Regalado et al., | 2 | Likely pathogenic |
| 6 | c.859C > T | p.Arg287Trp | MH2 | (van de Laar et al., | 2 | Likely pathogenic |
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| 7 | c.862_871+1dupAGACACATCGG | p.Arg292Aspfs*53 | MH2 | (Aubart et al., | 1 | Pathogenic |
| 7 | c.887T > C | p.Leu296Pro | MH2 | (Campens et al., | 1 | Likely pathogenic |
| 7 | c.988A > G | p.Thr330Ala | MH2 | (Ye et al., | 1 | Likely pathogenic |
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| 7 | c.1009+2T > A | MH2 | (Nevidomskyte et al., | 1 | Pathogenic | |
| 8 | c.1045G > C | p.Ala349Pro | MH2 | (van de Laar et al., | 1 | Likely pathogenic |
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| 8 | c.1081G > T | p.Glu361* | MH2 | (van de Laar et al., | 1 | Pathogenic |
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| 9 | c.1155‐2A > G | MH2 | (Campens et al., | 1 | Pathogenic | |
| 9 | c.1170_1179del | p.Ser391Alafs*7 | MH2 | (Wischmeijer et al., | 1 | Pathogenic |
| 9 | c.1179_1180dupC | p.Cys394Leufs*4 | MH2 | (Aubart et al., | 1 | Pathogenic |
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| 9 | c.1208C > T | p.Pro403Leu | MH2 | (Martens et al., | 1 | Likely pathogenic |
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| 9 | c.1259G > A | p.Arg420His | MH2 | (Proost et al., | 1 | VUS |
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| 9 | c.1267A > G | p.Ser423Gly | MH2 | (Aubart et al., | 1 | Likely pathogenic |
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| Deletion from exon 2 onwards: Chr2.hg19: g.(67,408,242)_(67,603,013)del | (Hilhorst‐Hofstee et al., | 1 | Pathogenic | |||
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Mutations identified in this study are indicated in bold.
Previously described and novel TGFB2 gene mutations
| Exon | c‐Notation | p‐Notation | Domain | Reference | Times reported | Effect |
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| 1 | c.294_308delCTACGCCAAGGAGGT | p.Ala100_Tyr104del | LAP | (Lindsay et al., | 1 | Likely pathogenic |
| 1 | c.297 > A | p.Tyr99* | LAP | (Lindsay et al., | 1 | Pathogenic |
| 1 | c.304G > T | p.Glu102* | LAP | (Boileau et al., | 1 | Pathogenic |
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| 5 | c.687C > A | p.Cys229* | LAP | (Boileau et al., | 1 | Pathogenic |
| 5 | c.839‐1G > A | p.Gly280Aspfs*41 | LAP | (Ritelli et al., | 1 | Pathogenic |
| 6 | c.873_888dup | p.Asn297* | LAP | (Boileau et al., | 1 | Pathogenic |
| 6 | c.979C > T | p.Arg327Trp | RKKR motif | (Lindsay et al., | 3 | Pathogenic |
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| 7 | c.1021_1025delTACAA | p.Tyr341Cysfs*25 | Cytokine | (Boileau et al., | 1 | Pathogenic |
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| 7 | c.1097C > A | p.Pro366His | Cytokine | (Lindsay et al., | 1 | Likely pathogenic |
| 7 | c.1106_1110delACAAT | p.Tyr369Cysfs*26 | Cytokine | (Lindsay et al., | 1 | Pathogenic |
| 7 | c.1125delT | p.Gly376Glufs*17 | Cytokine | (Renard et al., | 1 | Pathogenic |
| 7 | c.1165dupA | p.Ser389Lysfs*8 | Cytokine | (Leutermann et al., | 1 | Pathogenic |
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| Entire gene Chr1.hg19: g.(215,588,712)_(222,145,072)del | (Lindsay et al., | 1 | Pathogenic | |||
| Entire gene Chr1.hg19:g.(216,672,181)_(220,202,575)del | (Lindsay et al., | 1 | Pathogenic | |||
| Entire gene Chr1.hg19: g.(214,271,966)_(219,506,825)del | (Fontana et al., | 1 | Pathogenic | |||
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Mutations identified in this study are indicated in bold.
Previously described and novel TGFB3 and SMAD2 gene mutations
| Gene | Exon | c‐notation | p‐notation | Domain | Reference | Times reported | Effect |
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| 4 | c.704delA | p.Asn235Metfs*11 | LAP | (Bertoli‐Avella et al., | 1 | Pathogenic |
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| 4 | c.754+2T > C | p.Glu216_Lys251del | LAP | (Bertoli‐Avella et al., | 1 | Pathogenic |
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| 5 | c.898C > G | p.Arg300Gly | RKKR motif | (Kuechler et al., | 1 | Likely pathogenic |
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| 6 | c.965T > C | p.Ile322Thr | Cytokine | (Bertoli‐Avella et al., | 1 | Likely pathogenic |
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| 6 | c.1095C > A | p.Tyr365* | Cytokine | (Bertoli‐Avella et al., | 1 | Pathogenic |
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| 7 | c.1157delT | p.Leu386Argfs*21 | Cytokine | (Bertoli‐Avella et al., | 1 | Pathogenic |
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| 7 | c.1226G > A | p.Cys409Tyr | Cytokine | (Rienhoff et al., | 1 | Pathogenic |
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| 10 | c.1163A > G | p.Gln388Arg | MH2 | (Micha et al., | 1 | Likely pathogenic |
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| 11 | c.1346T > C | p.Leu449Ser | MH2 | (Micha et al., | 1 | Likely pathogenic |
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| 11 | c.1369G > A | p.Gly457Arg | MH2 | (Micha et al., | 1 | Likely pathogenic |
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Mutations identified in this study are indicated in bold.
Figure 1Schematic representation of the SMAD2 and SMAD3 gene with their protein coding domains. Boxes represent exons 1–11 and 1–9, respectively. On the left side of the schematic are the previously reported mutations, whereas on the right side mutations identified in this study are described. For SMAD2, the first depicted exon is exon 2 because exon 1 is 5′UTR. Mutations are annotated at the protein level, with exception of splice site mutations (reference transcript: NM_005901.5 and NM_005902.3 for SMAD3)
Figure 2Schematic representation of the TGFB2 and TGFB3 gene with their protein coding domains. Boxes represent exons 1–8 and 1–7, respectively. On the left side of the schematic are the previously reported mutations, whereas on the right side mutations identified in this study are described. Mutations are annotated at the protein level (reference transcript: NM_001135599.2 for TGFB2 and NM_003239.3 for TGFB3)
Pathogenic variants in SMAD2, SMAD3, TGFB2, and TGFB3 present in ExAC
| Gene | Variant (p‐notation) | Times in ExAC |
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| p.Gln388Arg | 1/121108 |
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| p.Arg420His | 1/120914 |
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| p.Arg193Trp | 1/121376 |
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| p.Ile322Thr | 1/121368 |
| p.Asp327Tyr | 1/121378 |
Figure 3Frequencies of the different types of SMAD2, SMAD3, TGFB2, and TGFB3 mutations identified so far
Comparison of the clinical manifestations of patients with SMAD2, SMAD3, TGFB2, and TGFB3 mutations
| TGFB2 | TGFB3 | SMAD3 | SMAD2 | |
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| Hypertelorism | + | + | + | + |
| Bifid uvula/cleft palate | + | + | + | − |
| Exotropia | + | + | + | ? |
| Craniosynostosis | − | − | + | ? |
| Cervical spine instability | − | + | + | ? |
| Retrognathia | + | + | + | − |
| Scoliosis | + | + | + | + |
| Club foot | + | + | + | − |
| Osteo‐arthritis | + | + | + | + |
| Dural ectasia | + | ? | + | + |
| Pneumothorax | + | − | + | + |
| Hernia | + | + | + | + |
| Dissection at young age | + | ? | + | − |
| Arterial tortuosity | + | − | + | + |
+ indicates presence of the clinical feature, − indicates absence of the clinical features and a question mark illustrates presence of the clinical feature is unknown.