| Literature DB >> 29374224 |
Mayank Kumar Sharma1, Jatin Machhi1, Prashant Murumkar1, Mange Ram Yadav2.
Abstract
Developing peripherally active cannabinoid 1 (Entities:
Mesh:
Substances:
Year: 2018 PMID: 29374224 PMCID: PMC5785958 DOI: 10.1038/s41598-018-20078-w
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Chemical structures of some known centrally and peripherally acting CB1 receptor antagonists (1–4).
Figure 2(a) Virtual screening flowchart and chemical structure of hit V11 (5), (b) Pharmacophore model (AHRR) aligned to hit V11 (5), (c) Binding mode of hit V11 (5) in the active site of CB1 receptor (red dotted line represents hydrogen bond).
Fitness score, predicted activity and G-score of the synthesized compounds.
| Comp | Fitness Score (Pharmacophore) | Predicted Activity ( | G-score (Docking) |
|---|---|---|---|
|
| 1.55 | 7.55 | −10.58 |
|
| 1.48 | 7.59 | −10.05 |
|
| 1.63 | 7.66 | −10.04 |
|
| 1.76 | 7.04 | −10.21 |
|
| 1.53 | 7.99 | −10.37 |
|
| 1.77 | 7.52 | −9.46 |
|
| 1.60 | 8.00 | −10.33 |
|
| 1.72 | 6.99 | −10.35 |
|
| 1.67 | 7.16 | −10.79 |
|
| 1.69 | 7.31 | −9.48 |
|
| 1.67 | 7.47 | −9.10 |
|
| 1.14 | 7.51 | −9.99 |
|
| 1.45 | 7.60 | −11.74 |
|
| 1.46 | 7.75 | −9.80 |
|
| 1.44 | 7.17 | −10.70 |
|
| 0.95 | 7.10 | −9.49 |
|
| 1.64 | 7.55 | −12.59 |
|
| 1.15 | 8.20 | −10.17 |
|
| 1.76 | 8.15 | −10.34 |
|
| 1.64 | 7.12 | −10.24 |
|
| 1.63 | 8.15 | −11.20 |
|
| 1.55 | 7.79 | −8.70 |
|
| 1.42 | 7.11 | −9.22 |
|
| 1.63 | 7.29 | −9.57 |
|
| 2.53 | 7.90 | −9.01 |
Calculated physicochemical and pharmacokinetic properties of the synthesized compounds.
| Comp | Mol. Wt | No. of HBD | No. of HBA | log P | PSA | No. of rotatable bonds | % Absorp-tion (human) | BBB perme-ability (logBB) | Metabolizedby | Total clearance log(ml/min/kg) |
|---|---|---|---|---|---|---|---|---|---|---|
|
| 459.46 | 2 | 7 | 3.77 | 100.37 | 5 | 89.93 | −1.30 | CYP3A4 | 0.158 |
|
| 425.91 | 2 | 7 | 3.59 | 99.42 | 5 | 88.59 | −1.02 | CYP3A4 | 0.079 |
|
| 421.49 | 2 | 8 | 3.20 | 107.71 | 6 | 86.29 | −0.97 | CYP3A4 | 0.313 |
|
| 391.46 | 2 | 7 | 2.95 | 97.59 | 5 | 86.93 | −0.84 | CYP3A4 | 0.138 |
|
| 506.51 | 2 | 8 | 5.33 | 106.26 | 6 | 78.15 | −1.54 | CYP3A4 | 0.195 |
|
| 472.96 | 2 | 8 | 4.83 | 106.27 | 6 | 100.00 | −1.26 | CYP3A4 | 0.117 |
|
| 468.54 | 2 | 8 | 4.42 | 114.55 | 7 | 100.00 | −1.31 | CYP3A4 | 0.351 |
|
| 438.51 | 2 | 8 | 4.42 | 104.43 | 6 | 100.00 | −1.08 | CYP3A4 | 0.176 |
|
| 486.48 | 0 | 7 | 4.68 | 76.81 | 3 | 100.00 | −1.57 | CYP3A4 | 0.150 |
|
| 452.93 | 0 | 8 | 4.17 | 76.82 | 3 | 100.00 | −0.89 | CYP3A4 | 0.067 |
|
| 448.51 | 0 | 8 | 3.72 | 85.10 | 4 | 100.00 | −1.32 | CYP3A4 | 0.302 |
|
| 418.48 | 0 | 7 | 3.66 | 76.83 | 3 | 100.00 | −1.10 | CYP3A4 | 0.133 |
|
| 500.51 | 2 | 8 | 3.73 | 96.27 | 4 | 71.62 | −1.72 | CYP3A4 | 0.032 |
|
| 466.96 | 2 | 8 | 3.25 | 96.28 | 4 | 81.62 | −1.44 | CYP3A4 | 0.046 |
|
| 462.54 | 2 | 9 | 2.85 | 104.57 | 5 | 79.30 | −1.09 | CYP3A4 | 0.174 |
|
| 432.51 | 2 | 8 | 2.77 | 96.29 | 4 | 78.80 | −0.87 | CYP3A4 | 0.009 |
|
| 459.50 | 2 | 6 | 5.04 | 75.23 | 7 | 91.35 | −0.95 | CYP3A4 | 0.151 |
|
| 425.93 | 2 | 6 | 4.33 | 75.33 | 7 | 100.00 | −0.68 | CYP3A4 | 0.094 |
|
| 421.53 | 2 | 7 | 4.17 | 81.92 | 8 | 100.00 | −0.74 | CYP3A4 | 0.319 |
|
| 391.50 | 2 | 6 | 4.07 | 75.22 | 7 | 100.00 | −0.52 | CYP3A4 | 0.153 |
|
| 506.56 | 2 | 7 | 6.31 | 81.73 | 8 | 89.36 | −1.25 | CYP3A4 | 0.160 |
|
| 473.00 | 2 | 7 | 5.82 | 81.73 | 8 | 100.00 | −0.98 | CYP3A4 | 0.103 |
|
| 468.58 | 2 | 8 | 5.47 | 87.55 | 9 | 100.00 | −1.04 | CYP3A4 | 0.328 |
|
| 438.56 | 2 | 7 | 5.34 | 80.52 | 8 | 95.59 | −0.81 | CYP3A4 | 0.162 |
|
| 463.79 | 1 | 5 | 6.11 | 53.32 | 2 | 100.00 | 0.23 | CYP3A4 | 0.156 |
Figure 3Synthetic pathway for compounds (5, 22–36). Reagents and conditions: (a) NaOC2H5, EtOH, rt; (b) triethylamine, DCM, reflux; (c) K2CO3, DMF, rt.
Figure 4Synthetic pathway for compounds (42–49). Reagents and conditions: (a) NaH, DMSO, THF, 0 °C; (b) K2CO3, DMF, rt.
Permeability (Pe) results of the test compounds from the PAMPA-BBB assay with their predicted penetration in CNS. (Data expressed as mean ± SEM of three independent experiments. CNS- indicates low passive CNS permeation).
| Compound | Prediction | |
|---|---|---|
|
| 2.78 ± 0.14 | CNS- |
|
| 2.28 ± 0.11 | CNS- |
|
| 3.08 ± 0.16 | CNS- |
|
| 2.72 ± 0.19 | CNS- |
|
| 3.66 ± 0.67 | CNS- |
|
| 2.80 ± 0.58 | CNS- |
|
| 3.22 ± 0.63 | CNS- |
|
| 1.05 ± 0.22 | CNS- |
|
| 2.09 ± 0.82 | CNS- |
|
| 2.60 ± 0.18 | CNS- |
|
| 3.47 ± 0.66 | CNS- |
|
| 3.58 ± 0.73 | CNS- |
|
| 2.84 ± 0.28 | CNS- |
|
| 3.28 ± 0.38 | CNS- |
Figure 5Hypophagic response of the test compounds in twenty four hour fasted rats. Among the tested compounds, 23, 25, 27 and 34 (10 mg/kg, p.o.) showed significant hypophagic activity alone (A) and also suppressed the hyperphagic effect of WIN-55212-2 (2 mg/kg, i.p.) (B) revealing their CB1 receptor antagonist potential. Data expressed as mean ± SEM (n = 6). **p < 0.01, *p < 0.05 vs. vehicle-treated control group (A). #p < 0.01 vs. vehicle-treated control group. ***p < 0.001 vs. WIN-55212-2-treated group (B). One-way ANOVA, Bonferroni post hoc test.
Figure 6Mapping of (a) the highest fitness score compound (26) and (b) the lowest fitness score compound (32) on the best pharmacophoric model (AHRR).
Figure 7Binding interactions of (a) active compound (25), and (b) less active compound (47) in the active site of CB1 receptor (red dotted line represents hydrogen bond).