Literature DB >> 29359808

Plant genetic resources for food and agriculture: opportunities and challenges emerging from the science and information technology revolution.

Michael Halewood1, Tinashe Chiurugwi2, Ruaraidh Sackville Hamilton3, Brad Kurtz4, Emily Marden5, Eric Welch6, Frank Michiels7, Javad Mozafari8, Muhamad Sabran9, Nicola Patron10, Paul Kersey11, Ruth Bastow12, Shawn Dorius13, Sonia Dias14, Susan McCouch15, Wayne Powell16.   

Abstract

Contents Summary 1407 I. Introduction 1408 II. Technological advances and their utility for gene banks and breeding, and longer-term contributions to SDGs 1408 III. The challenges that must be overcome to realise emerging R&D opportunities 1410 IV. Renewed governance structures for PGR (and related big data) 1413 V. Access and benefit sharing and big data 1416 VI. Conclusion 1417 Acknowledgements 1417 ORCID 1417 References 1417
SUMMARY: Over the last decade, there has been an ongoing revolution in the exploration, manipulation and synthesis of biological systems, through the development of new technologies that generate, analyse and exploit big data. Users of Plant Genetic Resources (PGR) can potentially leverage these capacities to significantly increase the efficiency and effectiveness of their efforts to conserve, discover and utilise novel qualities in PGR, and help achieve the Sustainable Development Goals (SDGs). This review advances the discussion on these emerging opportunities and discusses how taking advantage of them will require data integration and synthesis across disciplinary, organisational and international boundaries, and the formation of multi-disciplinary, international partnerships. We explore some of the institutional and policy challenges that these efforts will face, particularly how these new technologies may influence the structure and role of research for sustainable development, ownership of resources, and access and benefit sharing. We discuss potential responses to political and institutional challenges, ranging from options for enhanced structure and governance of research discovery platforms to internationally brokered benefit-sharing agreements, and identify a set of broad principles that could guide the global community as it seeks or considers solutions.
© 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

Keywords:  Sustainable Development Goals (SDGs); access and benefit sharing; big data; data integration; farmer's rights; global governance; plant genetic resources for food and agriculture (PGRFA); synthetic biology

Mesh:

Year:  2018        PMID: 29359808     DOI: 10.1111/nph.14993

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  17 in total

1.  Genomics-informed prebreeding unlocks the diversity in genebanks for wheat improvement.

Authors:  Albert W Schulthess; Sandip M Kale; Fang Liu; Yusheng Zhao; Norman Philipp; Maximilian Rembe; Yong Jiang; Ulrike Beukert; Albrecht Serfling; Axel Himmelbach; Jörg Fuchs; Markus Oppermann; Stephan Weise; Philipp H G Boeven; Johannes Schacht; C Friedrich H Longin; Sonja Kollers; Nina Pfeiffer; Viktor Korzun; Matthias Lange; Uwe Scholz; Nils Stein; Martin Mascher; Jochen C Reif
Journal:  Nat Genet       Date:  2022-10-04       Impact factor: 41.307

Review 2.  The INCREASE project: Intelligent Collections of food-legume genetic resources for European agrofood systems.

Authors:  Elisa Bellucci; Orlando Mario Aguilar; Saleh Alseekh; Kirstin Bett; Creola Brezeanu; Douglas Cook; Lucía De la Rosa; Massimo Delledonne; Denise F Dostatny; Juan J Ferreira; Valérie Geffroy; Sofia Ghitarrini; Magdalena Kroc; Shiv Kumar Agrawal; Giuseppina Logozzo; Mario Marino; Tristan Mary-Huard; Phil McClean; Vladimir Meglič; Tamara Messer; Frédéric Muel; Laura Nanni; Kerstin Neumann; Filippo Servalli; Silvia Străjeru; Rajeev K Varshney; Marta W Vasconcelos; Massimo Zaccardelli; Aleksei Zavarzin; Elena Bitocchi; Emanuele Frontoni; Alisdair R Fernie; Tania Gioia; Andreas Graner; Luis Guasch; Lena Prochnow; Markus Oppermann; Karolina Susek; Maud Tenaillon; Roberto Papa
Journal:  Plant J       Date:  2021-09-23       Impact factor: 7.091

Review 3.  Genebank Phenomics: A Strategic Approach to Enhance Value and Utilization of Crop Germplasm.

Authors:  Giao N Nguyen; Sally L Norton
Journal:  Plants (Basel)       Date:  2020-06-29

4.  Using Genomic Sequence Information to Increase Conservation and Sustainable Use of Crop Diversity and Benefit-Sharing.

Authors:  Michael Halewood; Isabel Lopez Noriega; Dave Ellis; Carolina Roa; Mathieu Rouard; Ruaraidh Sackville Hamilton
Journal:  Biopreserv Biobank       Date:  2018-10       Impact factor: 2.300

Review 5.  Can genomics deliver climate-change ready crops?

Authors:  Rajeev K Varshney; Vikas K Singh; Arvind Kumar; Wayne Powell; Mark E Sorrells
Journal:  Curr Opin Plant Biol       Date:  2018-04-21       Impact factor: 7.834

6.  Dealing with multi-source and multi-scale information in plant phenomics: the ontology-driven Phenotyping Hybrid Information System.

Authors:  Pascal Neveu; Anne Tireau; Nadine Hilgert; Vincent Nègre; Jonathan Mineau-Cesari; Nicolas Brichet; Romain Chapuis; Isabelle Sanchez; Cyril Pommier; Brigitte Charnomordic; François Tardieu; Llorenç Cabrera-Bosquet
Journal:  New Phytol       Date:  2018-08-28       Impact factor: 10.151

7.  BrAPI-an application programming interface for plant breeding applications.

Authors:  Peter Selby; Rafael Abbeloos; Jan Erik Backlund; Martin Basterrechea Salido; Guillaume Bauchet; Omar E Benites-Alfaro; Clay Birkett; Viana C Calaminos; Pierre Carceller; Guillaume Cornut; Bruno Vasques Costa; Jeremy D Edwards; Richard Finkers; Star Yanxin Gao; Mehmood Ghaffar; Philip Glaser; Valentin Guignon; Puthick Hok; Andrzej Kilian; Patrick König; Jack Elendil B Lagare; Matthias Lange; Marie-Angélique Laporte; Pierre Larmande; David S LeBauer; David A Lyon; David S Marshall; Dave Matthews; Iain Milne; Naymesh Mistry; Nicolas Morales; Lukas A Mueller; Pascal Neveu; Evangelia Papoutsoglou; Brian Pearce; Ivan Perez-Masias; Cyril Pommier; Ricardo H Ramírez-González; Abhishek Rathore; Angel Manica Raquel; Sebastian Raubach; Trevor Rife; Kelly Robbins; Mathieu Rouard; Chaitanya Sarma; Uwe Scholz; Guilhem Sempéré; Paul D Shaw; Reinhard Simon; Nahuel Soldevilla; Gordon Stephen; Qi Sun; Clarysabel Tovar; Grzegorz Uszynski; Maikel Verouden
Journal:  Bioinformatics       Date:  2019-10-15       Impact factor: 6.937

8.  The future of plant biotechnology in a globalized and environmentally endangered world.

Authors:  Marc Van Montagu
Journal:  Genet Mol Biol       Date:  2019-12-20       Impact factor: 1.771

9.  Perspectives on Applications of Hierarchical Gene-To-Phenotype (G2P) Maps to Capture Non-stationary Effects of Alleles in Genomic Prediction.

Authors:  Owen M Powell; Kai P Voss-Fels; David R Jordan; Graeme Hammer; Mark Cooper
Journal:  Front Plant Sci       Date:  2021-06-04       Impact factor: 5.753

10.  The Spanish Core Collection of Common Beans (Phaseolus vulgaris L.): An Important Source of Variability for Breeding Chemical Composition.

Authors:  Ana Rivera; Marçal Plans; Josep Sabaté; Francesc Casañas; Joan Casals; Aurora Rull; Joan Simó
Journal:  Front Plant Sci       Date:  2018-11-13       Impact factor: 5.753

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