| Literature DB >> 29350418 |
Haruna Nakamura1, Takao Fujisawa1, Shigeru Suga1, Kiyosu Taniguchi1, Mizuho Nagao1, Masahiro Ito2, Hitoshi Ochiai3, Masami Konagaya4, Nozomu Hanaoka4, Tsuguto Fujimoto4.
Abstract
Human adenoviruses (HAdVs) cause severe inflammatory respiratory infections, but previous epidemiological studies lacked analysis of the characteristics of the inflammation. Consecutive patients <13 years old with acute febrile illness during a 2-year period were tested. HAdV strains were isolated from nasopharyngeal swabs, and molecular identification was performed by hexon, fiber, and species-specific PCR methods. Blood inflammatory markers, including the white blood cell (WBC) count, CRP, and 29 cytokines, were measured. A total of 187 patients were enrolled, and HAdV types were identified from 175 patients (93.5%). Species C (types 2, 1, 5, and 6, in order of frequency) was most common at 37.1%, followed by B (type 3) at 30.9% and E (type 4) at 26.9%. Species C was detected predominantly in 1-year-old, whereas B and E were in older ages. Species C and B had seasonal circulation patterns, but E was found in only one season during the 2-year study period. The WBC count was highest in patients with species C. Eleven of the 29 tested serum cytokines were detected. Seven kinds, including G-CSF, IL-6, and TNF-α, were elevated in species C infections, whereas IL-10 was lowest in species C. Species differences in inflammatory responses, especially regarding serum cytokines were described in common pediatric HAdV infections. Species C causes the strongest inflammatory responses in young children.Entities:
Keywords: adenovirus; cytokine/chemokine; epidemiology; inflammation; seasonal incidence
Mesh:
Substances:
Year: 2018 PMID: 29350418 PMCID: PMC5887893 DOI: 10.1002/jmv.25032
Source DB: PubMed Journal: J Med Virol ISSN: 0146-6615 Impact factor: 2.327
Primers for hexon PCR
| Primer name | Sequence (5′ → 3′) | Target | Amplicon size (bp) |
|---|---|---|---|
| Adhex‐GT3F Adhex‐GT2R | CSGGNCAGGAYGCYTCGGRGTA CACCCATGTTRCCWGTNCTGTT | HAdV hexon | 1029 (1st PCR) |
| Adhex‐GT2F Adhex‐GT1R | AAYAARTTTAGRAAYCCCAC TTRTCYCTRAADSCAATGTARTT | HAdV hexon | 905 (2nd PCR) |
primers for fiber PCR
| Primer name | Sequence (5‘ → 3‘) | Target | Amplicon size (bp) |
|---|---|---|---|
| AdCF | TGCTTGCGCTHAAAATGGGCA | HAdV C fiber | a |
| Ad1R | CGAGTATAAGACGCCTATTTACA | HAdV‐1 fiber | 630 |
| Ad2R | CGCTAAGAGCGCCGCTAGTA | HAdV‐2 fiber | 204 |
| Ad5R | ATGCAAAGGAGCCCCGTAC | HAdV‐5 fiber | 455 |
| Ad6R | CTTGCAGTCTTTATCTGAAGCA | HAdV‐6 fiber | 929 |
| AdnB1 | TACCCYTATGAAGATGAAAGC | HAdV B fiber | a |
| Adn3t | TGTTTTTAAATAAGGTGTTAACG | HAdV‐3 fiber | 517 |
| Adn7t | GCCATTATTTGACAGTTGGCAGT | HAdV‐7 fiber | 404 |
| Adn4F | ACCAGTAGTACAGAAACAGGAG | HAdV‐4 fiber | a |
| Adn4t | CTTGAGCACTGCTTACTGTGCC | HAdV‐4 fiber | 295 |
| Ad57F1 | ATCCGCGCCCCTTAAAGTTGT | HAdV‐57 fiber | 808 |
Forward primer reference 19, 20
Primers for species PCR
| Primer name | Sequence (5‘→3‘) | Target | Amplicon size (bp) |
|---|---|---|---|
| AdA1 AdA2 | GCTGAAGAAMCWGAAGAAAATGA CRTTTGGTCTAGGGTAAGCAC | HAdV A fiber | 1444‐1537 |
| AdB1 AdB2 | TSTACCCYTATGAAGATGAAAGC GGATAAGCTGTAGTRCTKGGCAT | HAdV B fiber | 670‐772 |
| AdC1 AdC2 | TATTCAGCATCACCTCCTTTCC AAGCTATGTGGTGGTGGGGC | HAdV C fiber | 1988‐2000 |
| AdD1 AdD2 | GATGTCAAATTCCTGGTCCAC TACCCGTGCTGGTGTAAAAATC | HAdV D fiber | 1205‐1221 |
| AdE1 AdE2 | TCCCTACGATGCAGACAACG AGTGCCATCTATGCTATCTCC | HAdV E fiber | 967 |
| AdF1 AdF2 | ACTTAATGCTGACACGGGCAC TAATGTTTGTGTTACTCCGCTC | HAdV F fiber | 541‐586 |
Figure 1Frequency of species and types of isolated HAdVs. Of 177 virus isolates, HAdV species and types were identified for 175 samples. Identified types are listed in the right column and the pie chart indicates proportion of the types and species
Figure 2Temporal and age distribution of the isolated HAdVs during the 2‐year study period. Sample collection in this study started in October 2013 and ended in September 2015. Number of isolates identified in each month for species (B), species (C), and species (E) are shown in (2A), (2B), and (2C), respectively. Data for the first year (from October 2013 to September 2014) are depicted as solid columns and the second year (from October 2014 to September 2015) as open columns. Number of isolates by age for species (B), species (C) and species E are depicted in (2D), (2E) and (2F), respectively
Body temperature, white blood cell count and CRP of patients infected with each species
| Species B | Species C | Species E |
| |
|---|---|---|---|---|
| Body temperature (°C) | 39.2 ± 0.5 (38.0‐40.2) | 39.2 ± 0.6 (37.8‐40.4) | 39.4 ± 0.6 (38.2‐40.8) | 0.2782 |
| WBC (/µL) | 9975 ± 3163 (4200‐16500) | 14219 ± 4707** (7900‐28300) | 10024 ± 2884 (4400‐18000) | <0.0001 |
| CRP (mg/dL) | 2.9 ± 2.3 (0.2‐10.3) | 3.7 ± 3.3 (0.2‐12.4) | 4.3 ± 2.9 (0.7‐12.1) | 0.134 |
Mean ± SD (range), *ANOVA, **Tukey's multiple comparisons test P < 0.0001
Number (percentage) of patients with detected serum cytokines (>3 pg/mL)
| Infected HAdV species | Species | Total | ||
|---|---|---|---|---|
| Cytokine | B | C | E | |
|
|
|
|
| |
| EGF | 27 (50) | 39 (60) | 27 (57.4) | 93 (56) |
| Eotaxin | 45 (83.3) | 54 (83.1) | 35 (74.5) | 134 (80.7) |
| G‐CSF | 46 (85.2) | 53 (81.5) | 39 (83) | 138 (83.1) |
| GM‐CSF | 13 (24.1) | 28 (43.1) | 10 (21.3) | 51 (30.7) |
| IFN‐α2 | 9 (16.7) | 18 (27.7) | 3 (6.4) | 30 (18.1) |
| IFN‐γ | 47 (87) | 54 (83.1) | 34 (72.3) | 135 (81.3) |
| IL‐10 | 45 (83.3) | 51 (78.5) | 34 (72.3) | 130 (78.3) |
| IL‐12p40 | 15 (27.8) | 33 (50.8) | 6 (12.8) | 54 (32.5) |
| IL‐12p70 | 6 (11.1) | 10 (15.4) | 5 (10.6) | 21 (12.7) |
| IL‐13 | 4 (7.4) | 9 (13.8) | 6 (12.8) | 19 (11.4) |
| IL‐15 | 5 (9.3) | 10 (15.4) | 6 (12.8) | 21 (12.7) |
| IL‐17 | 11 (20.4) | 14 (21.5) | 9 (19.1) | 34 (20.5) |
| IL‐1ra | 46 (85.2) | 54 (83.1) | 38 (80.9) | 138 (83.1) |
| IL‐1α | 13 (24.1) | 21 (32.3) | 9 (19.1) | 43 (25.9) |
| IL‐1β | 1 (1.9) | 5 (7.7) | 3 (6.4) | 9 (5.4) |
| IL‐2 | 1 (1.9) | 5 (7.7) | 2 (4.3) | 8 (4.8) |
| IL‐3 | 0 (0) | 2 (3.1) | 0 (0) | 2 (1.2) |
| IL‐4 | 10 (18.5) | 14 (21.5) | 10 (21.3) | 34 (20.5) |
| IL‐5 | 1 (1.9) | 2 (3.1) | 0 (0) | 3 (1.8) |
| IL‐6 | 42 (77.8) | 53 (81.5) | 39 (83) | 134 (80.7) |
| IL‐7 | 13 (24.1) | 27 (41.5) | 7 (14.9) | 47 (28.3) |
| IL‐8 | 45 (83.3) | 54 (83.1) | 35 (74.5) | 134 (80.7) |
| IP‐10 | 47 (87) | 54 (83.1) | 40 (85.1) | 141 (84.9) |
| MCP‐1 | 47 (87) | 52 (80) | 36 (76.6) | 135 (81.3) |
| MIP‐1α | 9 (16.7) | 21 (32.3) | 2 (4.3) | 32 (19.3) |
| MIP‐1β | 44 (81.5) | 52 (80) | 33 (70.2) | 129 (77.7) |
| TNF‐α | 45 (83.3) | 52 (80) | 38 (80.9) | 135 (81.3) |
| TNF‐β | 5 (9.3) | 9 (13.8) | 5 (10.6) | 19 (11.4) |
| VEGF | 17 (31.5) | 34 (52.3) | 12 (25.5) | 63 (38) |
N, number of patients tested for serum cytokines.
Cytokine was detected in more than 70% of patients.
Figure 3Serum cytokine/chemokine levels by HAdV species. Of 11 cytokines detected in more than 70% of the samples, 7 cytokines (A‐G), were significantly elevated and IL‐10 (H) was significantly lower in patients with species C than those with the other species. Dunn's multiple comparisons test; *P < 0.05, **P < 0.01, ***P < 0.005, ****P < 0.0001