Literature DB >> 15750061

Multiplex PCR assay for rapid identification of oculopathogenic adenoviruses by amplification of the fiber and hexon genes.

Urmila Banik1, Arun Kumar Adhikary, Eiko Suzuki, Toshiki Inada, Nobuhiko Okabe.   

Abstract

Eye infections caused by adenovirus (Ad) often result in nosocomial infections and community epidemics with significant rates of morbidity. No antiviral agent effective against Ad is yet available for clinical use. Therefore, early diagnosis is still the mainstay for patient management and the prevention of epidemics. A multiplex PCR assay based on amplification of a combination of the fiber and hexon genes which can identify the six important oculopathogenic serotypes of Ads (Ad serotype 3[Ad3], Ad4, Ad7, Ad8, Ad19, and Ad37) in a single-tube amplification reaction was developed. Ad serotypes could be distinguished by the different amplicon sizes. The assay correctly identified prototype strains as well as isolates in clinical specimens. In comparison with a previously described PCR-restriction fragment polymorphism method, our assay gave unequivocal results for clinical specimens. Our multiplex PCR has the potential to serve as a rapid and cost-effective tool for the typing of important ocular Ads.

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Year:  2005        PMID: 15750061      PMCID: PMC1081273          DOI: 10.1128/JCM.43.3.1064-1068.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  23 in total

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Authors:  P Pring-Akerblom; T Adrian; T Köstler
Journal:  Res Virol       Date:  1997 May-Jun

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Journal:  J Virol Methods       Date:  1987-06       Impact factor: 2.014

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Journal:  Am J Epidemiol       Date:  1983-04       Impact factor: 4.897

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Journal:  J Clin Microbiol       Date:  1996-09       Impact factor: 5.948

5.  Rapid diagnosis of adenoviral conjunctivitis on conjunctival swabs by 10-minute immunochromatography.

Authors:  E Uchio; K Aoki; W Saitoh; N Itoh; S Ohno
Journal:  Ophthalmology       Date:  1997-08       Impact factor: 12.079

6.  Use of polymerase chain amplification reaction for the detection of adenoviruses in ocular swab specimens.

Authors:  P R Kinchington; S E Turse; R P Kowalski; Y J Gordon
Journal:  Invest Ophthalmol Vis Sci       Date:  1994-11       Impact factor: 4.799

7.  Analysis of 15 adenovirus hexon proteins reveals the location and structure of seven hypervariable regions containing serotype-specific residues.

Authors:  L Crawford-Miksza; D P Schnurr
Journal:  J Virol       Date:  1996-03       Impact factor: 5.103

8.  Type- and group-specific polymerase chain reaction for adenovirus detection.

Authors:  P Pring-Akerblom; T Adrian
Journal:  Res Virol       Date:  1994 Jan-Feb

9.  Sequence characterization of the adenovirus 31 fibre and comparison with serotypes of subgenera A to F.

Authors:  P Pring-Akerblom; T Adrian
Journal:  Res Virol       Date:  1995 Sep-Oct

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Authors:  S Yamadera; K Yamashita; M Akatsuka; N Kato; M Hashido; S Inouye; S Yamazaki
Journal:  Jpn J Med Sci Biol       Date:  1995-08
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  5 in total

1.  Rapid detection of oculopathogenic adenovirus in conjunctivitis.

Authors:  Maysaa El-Sayed Zaki; Ghada A Abd-El Fatah
Journal:  Curr Microbiol       Date:  2007-11-06       Impact factor: 2.188

2.  Worldwide increased prevalence of human adenovirus type 3 (HAdV-3) respiratory infections is well correlated with heterogeneous hypervariable regions (HVRs) of hexon.

Authors:  Ezazul Haque; Urmila Banik; Tahmina Monowar; Leela Anthony; Arun Kumar Adhikary
Journal:  PLoS One       Date:  2018-03-28       Impact factor: 3.240

3.  Species differences in circulation and inflammatory responses in children with common respiratory adenovirus infections.

Authors:  Haruna Nakamura; Takao Fujisawa; Shigeru Suga; Kiyosu Taniguchi; Mizuho Nagao; Masahiro Ito; Hitoshi Ochiai; Masami Konagaya; Nozomu Hanaoka; Tsuguto Fujimoto
Journal:  J Med Virol       Date:  2018-02-07       Impact factor: 2.327

4.  Infectious human adenoviruses are shed in urine even after disappearance of urethral symptoms.

Authors:  Nozomu Hanaoka; Shin Ito; Masami Konagaya; Naomi Nojiri; Mitsuru Yasuda; Tsuguto Fujimoto; Takashi Deguchi
Journal:  PLoS One       Date:  2019-03-06       Impact factor: 3.240

5.  Detection of a broad range of human adenoviruses in respiratory tract samples using a sensitive multiplex real-time PCR assay.

Authors:  Sallene Wong; Kanti Pabbaraju; Xiaoli L Pang; Bonita E Lee; Julie D Fox
Journal:  J Med Virol       Date:  2008-05       Impact factor: 2.327

  5 in total

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