Literature DB >> 29338267

Theory for the Liquid-Liquid Phase Separation in Aqueous Antibody Solutions.

Miha Kastelic1, Vojko Vlachy1.   

Abstract

This study presents the theory for liquid-liquid phase separation for systems of molecules modeling monoclonal antibodies. Individual molecule is depicted as an assembly of seven hard spheres, organized to mimic the Y-shaped antibody. We consider the antibody-antibody interactions either through Fab, Fab' (two Fab fragments may be different), or Fc domain. Interaction between these three domains of the molecule (hereafter denoted as A, B, and C, respectively) is modeled by a short-range square-well attraction. To obtain numerical results for the model under study, we adapt Wertheim's thermodynamic perturbation theory. We use this model to calculate the liquid-liquid phase separation curve and the second virial coefficient B2. Various interaction scenarios are examined to see how the strength of the site-site interactions and their range shape the coexistence curve. In the asymmetric case, where an attraction between two sites is favored and the interaction energies for the other sites kept constant, critical temperature first increases and than strongly decreases. Some more microscopic information, for example, the probability for the particular two sites to be connected, has been calculated. Analysis of the experimental liquid-liquid phase diagrams, obtained from literature, is presented. In addition, we calculate the second virial coefficient under conditions leading to the liquid-liquid phase separation and present this quantity on the graph B2 versus protein concentration.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 29338267      PMCID: PMC5980754          DOI: 10.1021/acs.jpcb.7b11458

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  38 in total

1.  Correlation between the osmotic second virial coefficient and the solubility of proteins.

Authors:  S Ruppert; S I Sandler; A M Lenhoff
Journal:  Biotechnol Prog       Date:  2001 Jan-Feb

2.  Construction, MD simulation, and hydrodynamic validation of an all-atom model of a monoclonal IgG antibody.

Authors:  J Paul Brandt; Thomas W Patapoff; Sergio R Aragon
Journal:  Biophys J       Date:  2010-08-04       Impact factor: 4.033

3.  Binary-liquid phase separation of lens protein solutions.

Authors:  M L Broide; C R Berland; J Pande; O O Ogun; G B Benedek
Journal:  Proc Natl Acad Sci U S A       Date:  1991-07-01       Impact factor: 11.205

4.  Phase transitions in human IgG solutions.

Authors:  Ying Wang; Aleksey Lomakin; Ramil F Latypov; Jacob P Laubach; Teru Hideshima; Paul G Richardson; Nikhil C Munshi; Kenneth C Anderson; George B Benedek
Journal:  J Chem Phys       Date:  2013-09-28       Impact factor: 3.488

5.  Behavior of monoclonal antibodies: relation between the second virial coefficient (B (2)) at low concentrations and aggregation propensity and viscosity at high concentrations.

Authors:  Shuntaro Saito; Jun Hasegawa; Naoki Kobayashi; Naoyuki Kishi; Susumu Uchiyama; Kiichi Fukui
Journal:  Pharm Res       Date:  2011-08-19       Impact factor: 4.200

6.  The phase behavior study of human antibody solution using multi-scale modeling.

Authors:  Gang Sun; Ying Wang; Aleksey Lomakin; George B Benedek; H Eugene Stanley; Limei Xu; Sergey V Buldyrev
Journal:  J Chem Phys       Date:  2016-11-21       Impact factor: 3.488

7.  Principles of assembly reveal a periodic table of protein complexes.

Authors:  Sebastian E Ahnert; Joseph A Marsh; Helena Hernández; Carol V Robinson; Sarah A Teichmann
Journal:  Science       Date:  2015-12-11       Impact factor: 47.728

8.  Quantitative evaluation of colloidal stability of antibody solutions using PEG-induced liquid-liquid phase separation.

Authors:  Ying Wang; Ramil F Latypov; Aleksey Lomakin; Julie A Meyer; Bruce A Kerwin; Suresh Vunnum; George B Benedek
Journal:  Mol Pharm       Date:  2014-04-15       Impact factor: 4.939

9.  Specific ion and buffer effects on protein-protein interactions of a monoclonal antibody.

Authors:  D Roberts; R Keeling; M Tracka; C F van der Walle; S Uddin; J Warwicker; R Curtis
Journal:  Mol Pharm       Date:  2014-12-02       Impact factor: 4.939

10.  Crystallization and preliminary X-ray diffraction analysis of the Fab fragment of WO2, an antibody specific for the Abeta peptides associated with Alzheimer's disease.

Authors:  Kwok S Wun; Luke A Miles; Gabriela A N Crespi; Kaye Wycherley; David B Ascher; Kevin J Barnham; Roberto Cappai; Konrad Beyreuther; Colin L Masters; Michael W Parker; William J McKinstry
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-04-30
View more
  7 in total

1.  Modeling the depletion effect caused by an addition of polymer to monoclonal antibody solutions.

Authors:  Yu V Kalyuzhnyi; V Vlachy
Journal:  J Phys Condens Matter       Date:  2018-11-12       Impact factor: 2.333

2.  Cluster Formation and Entanglement in the Rheology of Antibody Solutions.

Authors:  Nelson Ramallo; Subhash Paudel; Jeremy Schmit
Journal:  J Phys Chem B       Date:  2019-04-25       Impact factor: 2.991

3.  Evaluating the Effects of Hinge Flexibility on the Solution Structure of Antibodies at Concentrated Conditions.

Authors:  Marco A Blanco; Harold W Hatch; Joseph E Curtis; Vincent K Shen
Journal:  J Pharm Sci       Date:  2018-12-26       Impact factor: 3.534

Review 4.  The Protein Folding Problem: The Role of Theory.

Authors:  Roy Nassar; Gregory L Dignon; Rostam M Razban; Ken A Dill
Journal:  J Mol Biol       Date:  2021-07-03       Impact factor: 6.151

5.  Effect of Buffer on Protein Stability in Aqueous Solutions: A Simple Protein Aggregation Model.

Authors:  Sandi Brudar; Barbara Hribar-Lee
Journal:  J Phys Chem B       Date:  2021-03-03       Impact factor: 2.991

6.  Molecular Flexibility of Antibodies Preserved Even in the Dense Phase after Macroscopic Phase Separation.

Authors:  Anita Girelli; Christian Beck; Famke Bäuerle; Olga Matsarskaia; Ralph Maier; Fajun Zhang; Baohu Wu; Christian Lang; Orsolya Czakkel; Tilo Seydel; Frank Schreiber; Felix Roosen-Runge
Journal:  Mol Pharm       Date:  2021-10-12       Impact factor: 4.939

Review 7.  Computational models for studying physical instabilities in high concentration biotherapeutic formulations.

Authors:  Marco A Blanco
Journal:  MAbs       Date:  2022 Jan-Dec       Impact factor: 5.857

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.