Literature DB >> 29333480

GPU-based Branchless Distance-Driven Projection and Backprojection.

Rui Liu1, Lin Fu2, Bruno De Man2, Hengyong Yu3.   

Abstract

Projection and backprojection operations are essential in a variety of image reconstruction and physical correction algorithms in CT. The distance-driven (DD) projection and backprojection are widely used for their highly sequential memory access pattern and low arithmetic cost. However, a typical DD implementation has an inner loop that adjusts the calculation depending on the relative position between voxel and detector cell boundaries. The irregularity of the branch behavior makes it inefficient to be implemented on massively parallel computing devices such as graphics processing units (GPUs). Such irregular branch behaviors can be eliminated by factorizing the DD operation as three branchless steps: integration, linear interpolation, and differentiation, all of which are highly amenable to massive vectorization. In this paper, we implement and evaluate a highly parallel branchless DD algorithm for 3D cone beam CT. The algorithm utilizes the texture memory and hardware interpolation on GPUs to achieve fast computational speed. The developed branchless DD algorithm achieved 137-fold speedup for forward projection and 188-fold speedup for backprojection relative to a single-thread CPU implementation. Compared with a state-of-the-art 32-thread CPU implementation, the proposed branchless DD achieved 8-fold acceleration for forward projection and 10-fold acceleration for backprojection. GPU based branchless DD method was evaluated by iterative reconstruction algorithms with both simulation and real datasets. It obtained visually identical images as the CPU reference algorithm.

Entities:  

Keywords:  GPU; backprojection; branchless distance-driven; computed tomography; projection; reconstruction

Year:  2017        PMID: 29333480      PMCID: PMC5761753          DOI: 10.1109/TCI.2017.2675705

Source DB:  PubMed          Journal:  IEEE Trans Comput Imaging


  22 in total

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Journal:  IEEE Trans Med Imaging       Date:  2000-12       Impact factor: 10.048

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Authors:  Hengyong Yu; Ge Wang
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Authors:  Fang Xu; Klaus Mueller
Journal:  Phys Med Biol       Date:  2007-05-17       Impact factor: 3.609

5.  Hyperfast parallel-beam and cone-beam backprojection using the cell general purpose hardware.

Authors:  Marc Kachelriess; Michael Knaup; Olivier Bockenbach
Journal:  Med Phys       Date:  2007-04       Impact factor: 4.071

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Journal:  IEEE Trans Med Imaging       Date:  1994       Impact factor: 10.048

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Authors:  Jean-Baptiste Thibault; Ken D Sauer; Charles A Bouman; Jiang Hsieh
Journal:  Med Phys       Date:  2007-11       Impact factor: 4.071

8.  Technical note: RabbitCT--an open platform for benchmarking 3D cone-beam reconstruction algorithms.

Authors:  C Rohkohl; B Keck; H G Hofmann; J Hornegger
Journal:  Med Phys       Date:  2009-09       Impact factor: 4.071

9.  3D forward and back-projection for X-ray CT using separable footprints.

Authors:  Yong Long; Jeffrey A Fessler; James M Balter
Journal:  IEEE Trans Med Imaging       Date:  2010-06-07       Impact factor: 10.048

10.  An X-ray computed tomography imaging agent based on long-circulating bismuth sulphide nanoparticles.

Authors:  Oded Rabin; J Manuel Perez; Jan Grimm; Gregory Wojtkiewicz; Ralph Weissleder
Journal:  Nat Mater       Date:  2006-01-29       Impact factor: 43.841

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  3 in total

1.  Evaluation of GPU-Based CT Reconstruction for Morbidly Obese Patients.

Authors:  Rui Liu; Mannudeep K Kalra; Jiang Hsieh; Hengyong Yu
Journal:  JSM Biomed Imaging Data Pap       Date:  2017-01-09

2.  Iterative spectral CT reconstruction based on low rank and average-image-incorporated BM3D.

Authors:  Morteza Salehjahromi; Yanbo Zhang; Hengyong Yu
Journal:  Phys Med Biol       Date:  2018-08-06       Impact factor: 3.609

3.  Sparse-view, short-scan, dedicated cone-beam breast computed tomography: image quality assessment.

Authors:  Hsin Wu Tseng; Andrew Karellas; Srinivasan Vedantham
Journal:  Biomed Phys Eng Express       Date:  2020-09-28
  3 in total

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