| Literature DB >> 29321896 |
Maciej Wódkiewicz1, Katarzyna J Chwedorzewska2, Piotr T Bednarek3, Anna Znój2, Piotr Androsiuk4, Halina Galera1.
Abstract
We studied an invasion of Poa annua on King George Island (Maritime Antarctic). The remoteness of this location, its geographic isolation, and its limited human traffic provided an opportunity to trace the history of an invasion of the species. Poa annua was recorded for the first time at H. Arctowski Polish Antarctic Station in the austral summer of 1985/6. In 2008/9, the species was observed in a new locality at the Ecology Glacier Forefield (1.5 km from "Arctowski"). We used AFLP to analyze the genetic differences among three populations of P. annua: the two mentioned above (Station and Forefield) and the putative origin of the introduction, Warsaw (Poland). There was 38% genetic variance among the populations. Pairwise ФPT was 0.498 between the Forefield and Warsaw populations and 0.283 between Warsaw and Station. There were 15 unique bands in the Warsaw population (frequency from 6% to 100%) and one in the Station/Forefield populations (which appears in all analyzed individuals from both populations). The Δ(K) parameter indicated two groups of samples: Warsaw/Station and Forefield. As indicated by Fu's Fs statistics and an analysis of mismatch distribution, the Forefield population underwent a bottleneck and/or founder effect. The Forefield population was likely introduced by secondary dispersal from the Station population.Entities:
Keywords: alien species; amplified fragment length polymorphism; biological invasion; demographic processes
Year: 2017 PMID: 29321896 PMCID: PMC5756844 DOI: 10.1002/ece3.3675
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
Figure 1Location of Poa annua in the vicinity of Polish Antarctic Station Arctowski, ● Station, ▲ Forefield populations
Number of bands generated with the selected primer pairs for each analyzed population
| Primer pair code | Detected bands | Polymorphic bands | ||||
|---|---|---|---|---|---|---|
| Warsaw | Station | Forefield | Warsaw | Station | Forefield | |
| CpXpG‐AGC/M‐CCA | 32 | 29 | 25 | 11 | 7 | 1 |
| CpXpG‐GGC/M‐CAA | 27 | 28 | 25 | 14 | 8 | 4 |
| CpXpG‐AGA/M‐CCC | 28 | 28 | 27 | 9 | 7 | 6 |
| CpXpG‐AGG/M‐CAG | 59 | 55 | 49 | 33 | 23 | 12 |
| CpXpG‐TGC/M‐CGG | 18 | 14 | 14 | 7 | 0 | 0 |
| CpXpG‐ACC/M‐CCA | 78 | 69 | 62 | 43 | 27 | 19 |
| CpG‐GGT/M‐CCG | 13 | 13 | 13 | 0 | 0 | 0 |
| CpG‐AGG/M‐CAT | 16 | 16 | 16 | 4 | 2 | 2 |
| Total | 270 | 252 | 238 | 121 | 74 | 44 |
Figure 2Unweighted pair‐group method with arithmetical averages dendrogram based on all amplified fragment length polymorphism products for all analyzed Poa annua populations
Amplified fragment length polymorphism marker characteristics shared among individuals from analyzed populations
| Population | Warsaw | Station | Forefield |
|---|---|---|---|
| No. of bands | 271 | 252 | 238 |
| No. of bands frequency ≥5% | 256 (94%) | 248 (98%) | 237 (99.6%) |
| No. of unique bands | 15 | 1 | |
Intrapopulation genetic variability of the nonredundant AFLP's for the Warsaw, Station, and Forefield populations
| Population |
|
|
|
|
| P% |
|---|---|---|---|---|---|---|
| Warsaw | 96 | 1.386 ± 0.032 | 1.185 ± 0.019 | 0.172 ± 0.015 | 0.112 ± 0.010 | 41 |
| Station | 96 | 1.177 ± 0.034 | 1.149 ± 0.018 | 0.131 ± 0.014 | 0.087 ± 0.010 | 27 |
| Forefield | 30 | 1.011 ± 0.033 | 1.111 ± 0.017 | 0.088 ± 0.013 | 0.061 ± 0.009 | 15 |
N, number of samples; N a, number of different alleles; N e, number of effective alleles; I, Shannon's Information Index; H e, expected heterozygosity; P%, percentage of polymorphic alleles (5% criterion).
Partitioning of diversity found in Poa annua from all analyzed populations using AMOVA ΦPT 0.376, p < .001 (9,999 permutations)
| Source of variability | Sum of squares | Variance components | Percentage of variability |
|---|---|---|---|
| Among populations | 1110.8 | 8.04 | 38 |
| Within populations | 2925.5 | 13.36 | 62 |
| Total | 4036.3 | 21.4 |
Nei's Genetic distance (GD), pairwise ФPT, pairwise F ST between analyzed populations
| Population | Warsaw | Station | ||||
|---|---|---|---|---|---|---|
| Nei's GD | ФPT |
| Nei's GD | ФPT |
| |
|
| 0.053 | 0.283 | 0.283 | – | – | – |
|
| 0.136 | 0.498 | 0.498 | 0.094 | 0.466 | 0.498 |
Figure 3Estimated genetic structure for K = 2
Tajima's D test and Fu's F S neutrality tests of characteristic for analyzed populations
| Test | Description | Population | Statistics | |||
|---|---|---|---|---|---|---|
| Warsaw | Station | Forefield | Mean |
| ||
| Tajima's | S | 114 | 74 | 42 | 76.667 | 36.074 |
| Π | 31.596 | 25.614 | 14.347 | 23.852 | 8.758 | |
| Tajima's | 1.406 | 2.539 | 1.305 | 1.750 | 0.685 | |
| Tajima's | .890 | 1.000 | .950 | .946 | .055 | |
| Fu's | Θ–π | 31.596 | 25.614 | 14.347 | 23.852 | 8.758 |
| Expected no. of alleles | 44.482 | 40.297 | 16.534 | 33.771 | 16.073 | |
|
| −23.958 | −23.958 | −19.470 | −22.473 | 2.601 | |
|
| .000 | .000 | .000 | .000 | .000 | |
Mismatch analysis
| Model | Statistics | Warsaw | Station | Forefield | Mean |
|
|---|---|---|---|---|---|---|
| Demographic expansion | SSD | .0006 | .0027 | .0010 | .0014 | .0011 |
| Model (SSD) | .3270 | .0230 | .9110 | .4203 | .4513 | |
| Raggedness index | .0013 | .0023 | .0049 | .0028 | .0018 | |
| Raggedness | .6100 | .1050 | .8380 | .5173 | .3750 | |
| Spatial expansion | SSD | .0006 | .0027 | .0010 | .0014 | .0011 |
| Model (SSD) | .3050 | .1000 | .8860 | .4003 | .4457 | |
| Raggedness index | .0013 | .0023 | .0049 | .0028 | .0018 | |
| Raggedness | .6000 | .1180 | .8610 | .5263 | .3770 |
Arrangements of statistics for mismatch distribution and demographic/spatial expansion for all analyzed populations.
Testing bottleneck versus mutation drift equilibrium hypotheses for all analyzed populations
| Population | Mutation model | SING Test | Standardized test | Wilcoxon test |
|---|---|---|---|---|
| Warsaw | IAM | Hee = 45.4 | T2: 5.614 | One tail of heterozygosity deficiency 1.0000 |
| Hd = 45 |
| One tail of heterozygosity excess 0.0000 | ||
| He = 68 | Two tail of homozygosity deficiency and excess 0.0000 | |||
| Station | Hee = 29.87 | T2: 8.134 | One tail of heterozygosity deficiency 1.0000 | |
| Hd = 14 |
| One tail of heterozygosity excess 0.0000 | ||
| He = 60 | Two tail of homozygosity deficiency and excess 0.0000 | |||
| Forefield | Hee = 17.48 | T2: 3.696 | One tail of heterozygosity deficiency 0.99986 | |
| Hd = 11 |
| One tail of heterozygosity excess 0.00031 | ||
| He = 30 | Two tail of homozygosity deficiency and excess 0.00361 |
Hee, Expected heterozygosity excess; Hd, Heterozygosity deficiency; He, Heterozygosity excess.