Literature DB >> 29279385

High-resolution structure of podovirus tail adaptor suggests repositioning of an octad motif that mediates the sequential tail assembly.

Lingfei Liang1, Haiyan Zhao1, Bowen An1, Liang Tang2.   

Abstract

The sophisticated tail structures of DNA bacteriophages play essential roles in life cycles. Podoviruses P22 and Sf6 have short tails consisting of multiple proteins, among which is a tail adaptor protein that connects the portal protein to the other tail proteins. Assembly of the tail has been shown to occur in a sequential manner to ensure proper molecular interactions, but the underlying mechanism remains to be understood. Here, we report the high-resolution structure of the tail adaptor protein gp7 from phage Sf6. The structure exhibits distinct distribution of opposite charges on two sides of the molecule. A gp7 dodecameric ring model shows an entirely negatively charged surface, suggesting that the assembly of the dodecamer occurs through head-to-tail interactions of the bipolar monomers. The N-terminal helix-loop structure undergoes rearrangement compared with that of the P22 homolog complexed with the portal, which is achieved by repositioning of two consecutive repeats of a conserved octad sequence motif. We propose that the conformation of the N-terminal helix-loop observed in the Sf6-gp7 and P22 portal:gp4 complex represents the pre- and postassembly state, respectively. Such motif repositioning may serve as a conformational switch that creates the docking site for the tail nozzle only after the assembly of adaptor protein to the portal. In addition, the C-terminal portion of gp7 shows conformational flexibility, indicating an induced fit on binding to the portal. These results provide insight into the mechanistic role of the adaptor protein in mediating the sequential assembly of the phage tail.

Entities:  

Keywords:  bacteriophage; octad motif repositioning; sequential assembly; tail; virus assembly

Mesh:

Substances:

Year:  2017        PMID: 29279385      PMCID: PMC5777027          DOI: 10.1073/pnas.1706846115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

1.  Resolution and Probabilistic Models of Components in CryoEM Maps of Mature P22 Bacteriophage.

Authors:  Grigore Pintilie; Dong-Hua Chen; Cameron A Haase-Pettingell; Jonathan A King; Wah Chiu
Journal:  Biophys J       Date:  2015-12-30       Impact factor: 4.033

2.  Structure of bacteriophage SPP1 head-to-tail connection reveals mechanism for viral DNA gating.

Authors:  Sophie Lhuillier; Matthieu Gallopin; Bernard Gilquin; Sandrine Brasilès; Nathalie Lancelot; Guillaume Letellier; Mathilde Gilles; Guillaume Dethan; Elena V Orlova; Joël Couprie; Paulo Tavares; Sophie Zinn-Justin
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-11       Impact factor: 11.205

3.  Structural evolution of the P22-like phages: comparison of Sf6 and P22 procapsid and virion architectures.

Authors:  Kristin N Parent; Eddie B Gilcrease; Sherwood R Casjens; Timothy S Baker
Journal:  Virology       Date:  2012-03-03       Impact factor: 3.616

4.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

5.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  The bacteriophage t7 virion undergoes extensive structural remodeling during infection.

Authors:  Bo Hu; William Margolin; Ian J Molineux; Jun Liu
Journal:  Science       Date:  2013-01-10       Impact factor: 47.728

7.  Bacteriophage T4 morphogenesis as a model for assembly of subcellular structure.

Authors:  W B Wood
Journal:  Q Rev Biol       Date:  1980-12       Impact factor: 4.875

8.  How good are my data and what is the resolution?

Authors:  Philip R Evans; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-06-13

9.  Three-dimensional structure of a viral genome-delivery portal vertex.

Authors:  Adam S Olia; Peter E Prevelige; John E Johnson; Gino Cingolani
Journal:  Nat Struct Mol Biol       Date:  2011-04-17       Impact factor: 15.369

10.  Three-dimensional structure of the bacteriophage P22 tail machine.

Authors:  Liang Tang; William R Marion; Gino Cingolani; Peter E Prevelige; John E Johnson
Journal:  EMBO J       Date:  2005-06-02       Impact factor: 11.598

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  3 in total

Review 1.  Portal Protein: The Orchestrator of Capsid Assembly for the dsDNA Tailed Bacteriophages and Herpesviruses.

Authors:  Corynne L Dedeo; Gino Cingolani; Carolyn M Teschke
Journal:  Annu Rev Virol       Date:  2019-07-23       Impact factor: 10.431

2.  Isolation and Complete Sequence of One Novel Marine Bacteriophage PHS21 Infecting Pseudoalteromonas marina.

Authors:  Yan Li; Huifang Li; Yong Jiang; Hongbing Shao; Hui He; Min Wang
Journal:  Curr Microbiol       Date:  2022-06-07       Impact factor: 2.188

Review 3.  Ecology, Structure, and Evolution of Shigella Phages.

Authors:  Sundharraman Subramanian; Kristin N Parent; Sarah M Doore
Journal:  Annu Rev Virol       Date:  2020-05-11       Impact factor: 10.431

  3 in total

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