| Literature DB >> 29268614 |
Yang Wei1, Antonio Tinoco2, Viktoria Steck2, Rudi Fasan2, Yong Zhang1.
Abstract
Catalytic carbene transfer to olefins is a useful approach to synthesize cyclopropanes, which are key structural motifs in many drugs and biologically active natural products. While catalytic methods for olefin cyclopropanation have largely relied on rare transition-metal-based catalysts, recent studies have demonstrated the promise and synthetic value of iron-based heme-containing proteins for promoting these reactions with excellent catalytic activity and selectivity. Despite this progress, the mechanism of iron-porphyrin and hemoprotein-catalyzed olefin cyclopropanation has remained largely unknown. Using a combination of quantum chemical calculations and experimental mechanistic analyses, the present study shows for the first time that the increasingly useful C═C functionalizations mediated by heme carbenes feature an FeII-based, nonradical, concerted nonsynchronous mechanism, with early transition state character. This mechanism differs from the FeIV-based, radical, stepwise mechanism of heme-dependent monooxygenases. Furthermore, the effects of the carbene substituent, metal coordinating axial ligand, and porphyrin substituent on the reactivity of the heme carbenes was systematically investigated, providing a basis for explaining experimental reactivity results and defining strategies for future catalyst development. Our results especially suggest the potential value of electron-deficient porphyrin ligands for increasing the electrophilicity and thus the reactivity of the heme carbene. Metal-free reactions were also studied to reveal temperature and carbene substituent effects on catalytic vs noncatalytic reactions. This study sheds new light into the mechanism of iron-porphyrin and hemoprotein-catalyzed cyclopropanation reactions and it is expected to facilitate future efforts toward sustainable carbene transfer catalysis using these systems.Entities:
Mesh:
Substances:
Year: 2018 PMID: 29268614 PMCID: PMC5875692 DOI: 10.1021/jacs.7b09171
Source DB: PubMed Journal: J Am Chem Soc ISSN: 0002-7863 Impact factor: 15.419
Scheme 1Target Cyclopropanation Reactions
(A) Concerted and stepwise pathway for FeII-porphyrin catalyzed cyclopropanation of styrene. Oval represents the porphyrin ligand. (B) Reactions 1-9 involving different reactants (R).
Figure 1(A) TS; (B) TS; (C) TS1; (D) TS1 in reaction 1. Atom color scheme: Fe, black; C, cyan; N, blue; O, red; H, gray.
Figure 2(1–9) Atomic charge changes from reactants to transition state (in black) and charge transfers (in blue) as indicated by arrows and numbers in parentheses in reactions 1–9.
Figure 3(1–9) Key geometric parameters at transition state (in black) and changes from reactants to transition state (in blue) in reactions 1–9. Atom color scheme: Fe, black; O, red; C, cyan; H, gray; F, purple; S, yellow.
Biocatalytic and Chemocatalytic Cyclopropanation Reactions with cis-β-Deutero-styrene
| Entry | Catalyst | Reaction
Conditions | Yield | Ratio | % isomeriz. |
|---|---|---|---|---|---|
| 1 | Mb(H64V,V68A) | 48% | 1:0 | 0% | |
| 2 | Mb | 3% | 1:0 | 0% | |
| 3 | Fe(ppIX) | 24% | 1:0.017 | 1.7% | |
| 4 | Fe(TPP) | 14% | 1:0 | 0% | |
| 5 | Co(TPP) | 5% | 1:0.66 | 39.7% |
Reaction conditions A: 200 mM 1, 400 mM EDA, 60 μM Mb variant (or hemin), 10 mM sodium dithionite in 50 mM potassium phosphate buffer (pH 7) containing 10% DMF, room temp., 16 h. Reaction conditions B: 0.475 mmol 1, 1.5 equiv EDA (slow addition), 5 mol % catalyst in CH2Cl2, 40 °C, 16 h.
Isolated yield for trans-configured product relative to Ph and CO2Et groups (racemic for all reactions except with Mb(H64V,V68A).
Based on peak integration in 2H NMR spectrum.
Cyclopropanation Reactions in the Presence or Absence of Free-Radical Spin Trapping Agent
| Entry | Catalyst | Reaction
Conditions | DMPO | Yield | % | % |
|---|---|---|---|---|---|---|
| 1 | Mb(H64V,V68A) | No | 86% | 99 | 99 | |
| 2 | Mb(H64V,V68A) | Yes | 82% | 99 | 98 | |
| 3 | Mb | No | 27% | 89 | 3 | |
| 4 | Mb | Yes | 35% | 90 | 1 | |
| 5 | Fe(ppIX) | No | 8% | 87 | 0 | |
| 6 | Fe(ppIX) | Yes | 13% | 87 | 0 | |
| 7 | Co(TPP) | No | 76% | 49 | 0 | |
| 8 | Co(TPP) | Yes | 8% | 29 | 0 |
Reaction conditions A: 10 mM styrene, 20 mM EDA, 20 μM Mb variant (or hemin), 10 mM sodium dithionite in 50 mM potassium phosphate buffer (pH 7) containing 10% DMF, room temp., 16 h. Reaction conditions B: 0.24 mmol styrene, 1.5 equiv EDA (slow addition), 5 mol % Co(TPP) in CH2Cl2, 40 °C, 16 h.
With or without 10 equiv DMPO relative to styrene.
GC yield.
Diastereomeric (de) and enantiomeric excess (ee) for trans-(1S,2S) cyclopropane product.
Key Energy, Charge, and Geometry Parametersa
| Reaction | Δ | Δ | Δ | Δ | Δ | ||
|---|---|---|---|---|---|---|---|
| 18.58 | –35.50 | 0.158 | –0.266 | 0.013 | 1.344 | 0.518 | |
| 12.47 | –39.18 | 0.227 | –0.148 | 0.019 | 1.350 | 0.110 | |
| 19.74 | –30.43 | 0.129 | –0.324 | 0.018 | 1.349 | 0.808 | |
| 16.25 | –17.46 | 0.118 | –0.245 | 0.008 | 1.339 | 0.622 | |
| 21.89 | –11.69 | 0.161 | –0.373 | 0.020 | 1.351 | 0.728 | |
| 9.24 | –56.65 | 0.169 | –0.142 | 0.014 | 1.345 | 0.108 | |
| 11.28 | –66.71 | 0.180 | –0.155 | 0.018 | 1.349 | 0.127 | |
| 7.49 | –36.14 | 0.208 | –0.122 | 0.015 | 1.346 | 0.088 | |
| 11.90 | –41.27 | 0.223 | –0.137 | 0.019 | 1.350 | 0.101 |
Results are for the most favorable trans products. Changes are those at transition state compared with reactants.
Reactivity Analysis of Bio- And Chemocatalytic Cyclopropanation Reactions Involving Different Diazo Reagentsa
| Entry | Catalyst | Temp | Product | Rate | TON |
|---|---|---|---|---|---|
| 1 | Mb(H64V,V68A) | r.t. | 528 | 7,840 | |
| 2 | Mb(H64V,V68A) | 50 °C | 1 | 55 | |
| 3 | – | 50 °C | 1 | (0.2) | |
| 4 | Fe(ppIX) | r.t. | 2 | 16 | |
| 5 | Fe(ppIX) | 50 °C | n.a. | n.a. | |
| 6 | Fe(TPP) | r.t. | 0.2 | 2 | |
| 7 | Fe(TPP) | r.t. | 5 × 10–4 | 0.02 |
Reaction conditions: 10 mM 5, 10 mM EDA (2) or EPDA (6), catalyst (0.01 mol % Mb(H64V,V68A); 2 mol % hemin; 10 mol % Fe(TPP)), 10 mM sodium dithionite in 50 mM potassium phosphate buffer (pH 7) for Mb variant and hemin, or CH2Cl2 for Fe(TPP), at the indicated temperature.
Initial rate over 1 min (EDA) and over 30 min (EDPA)
After 16 h; n.a. = not active.
Figure 4Plot of ΔQC1 vs ΔG‡.
Scheme 2Cyclopropanation Pathways with and without Metal
The reported data are calculated at room temperature in protein environment.
Energies for Rate Determining Steps in Pathways I–IV
| C(X)Y | From | Pathway | Δ | |
|---|---|---|---|---|
| X = H, Y = CO2Et | r.t. | Diazo | I | 13.59 |
| V | 34.50 | |||
| IPC | III | 10.46 | ||
| IV | 38.89 | |||
| 80 °C | Diazo | I | 15.78 | |
| V | 33.90 | |||
| IPC | III | 13.41 | ||
| IV | 36.22 | |||
| X = Ph, Y = CO2Et | r.t. | Diazo | I | 15.74 |
| V | 31.45 | |||
| IPC | III | 16.87 | ||
| IV | 32.02 | |||
| 60 °C | Diazo | I | 17.73 | |
| V | 31.30 | |||
| IPC | III | 18.58 | ||
| IV | 30.15 | |||
| X = Ph, Y = Ph | r.t. | Diazo | I | 18.28 |
| V | 30.67 | |||
| IPC | III | 18.20 | ||
| IV | 33.57 | |||
| 60 °C | Diazo | I | 20.20 | |
| V | 30.51 | |||
| IPC | III | 19.74 | ||
| IV | 31.80 |
Protein environment.
Benzene.
Unit: kcal/mol.