Literature DB >> 29208704

Increased Phosphorylation of Ser-Gln Sites on SUPPRESSOR OF GAMMA RESPONSE1 Strengthens the DNA Damage Response in Arabidopsis thaliana.

Kaoru Okamoto Yoshiyama1, Kaori Kaminoyama1, Tomoaki Sakamoto1, Seisuke Kimura2.   

Abstract

The Arabidopsis thaliana transcription factor SUPPRESSOR OF GAMMA RESPONSE1 (SOG1) regulates hundreds of genes in response to DNA damage, and this results in the activation of cell cycle arrest, DNA repair, endoreduplication, and programmed cell death. However, it is not clear how this single transcription factor regulates each of these pathways. We previously reported that phosphorylation of five Ser-Gln (SQ) motifs in the C-terminal region of SOG1 are required to activate downstream pathways. In this study, we introduced Ser-to-Ala (AQ) substitutions in these five SQ motifs to progressively eliminate them and then we examined the effects on DNA damage responses. We found that all SQs are required for the full activation of SOG1 and that the expression level of most downstream genes changed incrementally depending on the number of phosphorylated SQ sites. Genes involved in DNA repair and cell cycle progression underwent stepwise activation and inhibition respectively as the number of phosphorylated SQ sites increased. Also, inhibition of DNA synthesis, programmed cell death, and cell differentiation were incrementally induced as the number of phosphorylated SQ sites increased. These results show that the extent of SQ phosphorylation in SOG1 regulates gene expression levels and determines the strength of DNA damage responses.
© 2017 American Society of Plant Biologists. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2017        PMID: 29208704      PMCID: PMC5757268          DOI: 10.1105/tpc.17.00267

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  36 in total

Review 1.  Regulation of transcription factor function by phosphorylation.

Authors:  A J Whitmarsh; R J Davis
Journal:  Cell Mol Life Sci       Date:  2000-08       Impact factor: 9.261

2.  Two Arabidopsis cyclin A3s possess G1 cyclin-like features.

Authors:  Ikuo Takahashi; Shoko Kojima; Norihiro Sakaguchi; Chikage Umeda-Hara; Masaaki Umeda
Journal:  Plant Cell Rep       Date:  2010-02-04       Impact factor: 4.570

3.  A shared DNA-damage-response pathway for induction of stem-cell death by UVB and by gamma irradiation.

Authors:  T Furukawa; M J Curtis; C M Tominey; Y H Duong; B W L Wilcox; D Aggoune; J B Hays; A B Britt
Journal:  DNA Repair (Amst)       Date:  2010-07-15

4.  Aluminum-Dependent Terminal Differentiation of the Arabidopsis Root Tip Is Mediated through an ATR-, ALT2-, and SOG1-Regulated Transcriptional Response.

Authors:  Caroline A Sjogren; Stephen C Bolaris; Paul B Larsen
Journal:  Plant Cell       Date:  2015-08-28       Impact factor: 11.277

Review 5.  Repair and tolerance of oxidative DNA damage in plants.

Authors:  Teresa Roldán-Arjona; Rafael R Ariza
Journal:  Mutat Res       Date:  2008-07-29       Impact factor: 2.433

6.  Development of series of gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation.

Authors:  Tsuyoshi Nakagawa; Takayuki Kurose; Takeshi Hino; Katsunori Tanaka; Makoto Kawamukai; Yasuo Niwa; Kiminori Toyooka; Ken Matsuoka; Tetsuro Jinbo; Tetsuya Kimura
Journal:  J Biosci Bioeng       Date:  2007-07       Impact factor: 2.894

7.  AtATM is essential for meiosis and the somatic response to DNA damage in plants.

Authors:  Valérie Garcia; Hugues Bruchet; Delphine Camescasse; Fabienne Granier; David Bouchez; Alain Tissier
Journal:  Plant Cell       Date:  2003-01       Impact factor: 11.277

8.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

9.  Molecular Evolution and Functional Diversification of Replication Protein A1 in Plants.

Authors:  Behailu B Aklilu; Kevin M Culligan
Journal:  Front Plant Sci       Date:  2016-01-29       Impact factor: 5.753

10.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.

Authors:  Mark D Robinson; Davis J McCarthy; Gordon K Smyth
Journal:  Bioinformatics       Date:  2009-11-11       Impact factor: 6.937

View more
  11 in total

1.  Ser-Gln sites of SOG1 are rapidly hyperphosphorylated in response to DNA double-strand breaks.

Authors:  K O Yoshiyama; S Kimura
Journal:  Plant Signal Behav       Date:  2018-06-25

2.  The Arabidopsis ATR-SOG1 signaling module regulates pleiotropic developmental adjustments in response to 3'-blocked DNA repair intermediates.

Authors:  Jinchao Li; Wenjie Liang; Yi Liu; Zhitong Ren; Dong Ci; Jinjie Chang; Weiqiang Qian
Journal:  Plant Cell       Date:  2022-02-03       Impact factor: 11.277

3.  SOG1, a plant-specific master regulator of DNA damage responses, originated from nonvascular land plants.

Authors:  Ayako N Sakamoto; Tomoaki Sakamoto; Yuichiro Yokota; Mika Teranishi; Kaoru O Yoshiyama; Seisuke Kimura
Journal:  Plant Direct       Date:  2021-12-27

4.  Rice and Arabidopsis homologs of yeast CHROMOSOME TRANSMISSION FIDELITY PROTEIN 4 commonly interact with Polycomb complexes but exert divergent regulatory functions.

Authors:  Pingxian Zhang; Chunmei Zhu; Yuke Geng; Yifan Wang; Ying Yang; Qing Liu; Weijun Guo; Sadaruddin Chachar; Adeel Riaz; Shuangyong Yan; Liwen Yang; Keke Yi; Changyin Wu; Xiaofeng Gu
Journal:  Plant Cell       Date:  2021-07-02       Impact factor: 11.277

5.  SOG1 activator and MYB3R repressors regulate a complex DNA damage network in Arabidopsis.

Authors:  Clara Bourbousse; Neeraja Vegesna; Julie A Law
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-12       Impact factor: 11.205

6.  A regulatory module controlling stress-induced cell cycle arrest in Arabidopsis.

Authors:  Naoki Takahashi; Nobuo Ogita; Tomonobu Takahashi; Shoji Taniguchi; Maho Tanaka; Motoaki Seki; Masaaki Umeda
Journal:  Elife       Date:  2019-04-09       Impact factor: 8.140

7.  Phosphoproteomic analysis reveals plant DNA damage signalling pathways with a functional role for histone H2AX phosphorylation in plant growth under genotoxic stress.

Authors:  Wanda M Waterworth; Michael Wilson; Dapeng Wang; Thomas Nuhse; Stacey Warward; Julian Selley; Christopher E West
Journal:  Plant J       Date:  2019-09-10       Impact factor: 6.417

Review 8.  Intrinsic Disorder in Plant Transcription Factor Systems: Functional Implications.

Authors:  Edoardo Salladini; Maria L M Jørgensen; Frederik F Theisen; Karen Skriver
Journal:  Int J Mol Sci       Date:  2020-12-21       Impact factor: 5.923

9.  XAP5 CIRCADIAN TIMEKEEPER Affects Both DNA Damage Responses and Immune Signaling in Arabidopsis.

Authors:  Roderick W Kumimoto; Cory T Ellison; Tania Y Toruño; Aurélie Bak; Hongtao Zhang; Clare L Casteel; Gitta Coaker; Stacey L Harmer
Journal:  Front Plant Sci       Date:  2021-10-01       Impact factor: 5.753

Review 10.  Phosphorylation Site Motifs in Plant Protein Kinases and Their Substrates.

Authors:  Lin Xi; Zhaoxia Zhang; Sandra Herold; Sarah Kassem; Xu Na Wu; Waltraud X Schulze
Journal:  Methods Mol Biol       Date:  2021
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.