Literature DB >> 34270043

Phosphorylation Site Motifs in Plant Protein Kinases and Their Substrates.

Lin Xi1, Zhaoxia Zhang2, Sandra Herold2, Sarah Kassem2, Xu Na Wu3, Waltraud X Schulze2.   

Abstract

Protein phosphorylation is an important cellular regulatory mechanism affecting the activity, localization, conformation, and interaction of proteins. Protein phosphorylation is catalyzed by kinases, and thus kinases are the enzymes regulating cellular signaling cascades. In the model plant Arabidopsis, 940 genes encode for kinases. The substrate proteins of kinases are phosphorylated at defined sites, which consist of common patterns around the phosphorylation site, known as phosphorylation motifs. The discovery of kinase specificity with a preference of phosphorylation of certain motifs and application of such motifs in deducing signaling cascades helped to reveal underlying regulation mechanisms, and facilitated the prediction of kinase-target pairs. In this mini-review, we took advantage of retrieved data as examples to present the functions of kinase families along with their commonly found phosphorylation motifs from their substrates.
© 2021. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Biological function; Kinase families; Phosphorylation; Phosphorylation motifs

Mesh:

Substances:

Year:  2021        PMID: 34270043     DOI: 10.1007/978-1-0716-1625-3_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  60 in total

1.  The Scope, Functions, and Dynamics of Posttranslational Protein Modifications.

Authors:  A Harvey Millar; Joshua L Heazlewood; Carmela Giglione; Michael J Holdsworth; Andreas Bachmair; Waltraud X Schulze
Journal:  Annu Rev Plant Biol       Date:  2019-02-20       Impact factor: 26.379

Review 2.  Receptor-Like Cytoplasmic Kinases: Central Players in Plant Receptor Kinase-Mediated Signaling.

Authors:  Xiangxiu Liang; Jian-Min Zhou
Journal:  Annu Rev Plant Biol       Date:  2018-04-29       Impact factor: 26.379

Review 3.  Aurora Kinases Throughout Plant Development.

Authors:  Annika K Weimer; Dmitri Demidov; Inna Lermontova; Tom Beeckman; Daniël Van Damme
Journal:  Trends Plant Sci       Date:  2015-11-23       Impact factor: 18.313

4.  Mass-spectrometry-based draft of the Arabidopsis proteome.

Authors:  Julia Mergner; Martin Frejno; Markus List; Michael Papacek; Xia Chen; Ajeet Chaudhary; Patroklos Samaras; Sandra Richter; Hiromasa Shikata; Maxim Messerer; Daniel Lang; Stefan Altmann; Philipp Cyprys; Daniel P Zolg; Toby Mathieson; Marcus Bantscheff; Rashmi R Hazarika; Tobias Schmidt; Corinna Dawid; Andreas Dunkel; Thomas Hofmann; Stefanie Sprunck; Pascal Falter-Braun; Frank Johannes; Klaus F X Mayer; Gerd Jürgens; Mathias Wilhelm; Jan Baumbach; Erwin Grill; Kay Schneitz; Claus Schwechheimer; Bernhard Kuster
Journal:  Nature       Date:  2020-03-11       Impact factor: 49.962

5.  The Arabidopsis Kinome: phylogeny and evolutionary insights into functional diversification.

Authors:  Monika Zulawski; Gunnar Schulze; Rostyslav Braginets; Stefanie Hartmann; Waltraud X Schulze
Journal:  BMC Genomics       Date:  2014-07-01       Impact factor: 3.969

6.  Abundant protein phosphorylation potentially regulates Arabidopsis anther development.

Authors:  Juanying Ye; Zaibao Zhang; Chenjiang You; Xumin Zhang; Jianan Lu; Hong Ma
Journal:  J Exp Bot       Date:  2016-08-16       Impact factor: 6.992

7.  The functional landscape of the human phosphoproteome.

Authors:  David Ochoa; Andrew F Jarnuczak; Cristina Viéitez; Maja Gehre; Margaret Soucheray; André Mateus; Askar A Kleefeldt; Anthony Hill; Luz Garcia-Alonso; Frank Stein; Nevan J Krogan; Mikhail M Savitski; Danielle L Swaney; Juan A Vizcaíno; Kyung-Min Noh; Pedro Beltrao
Journal:  Nat Biotechnol       Date:  2019-12-09       Impact factor: 54.908

8.  PhosPhAt goes kinases--searchable protein kinase target information in the plant phosphorylation site database PhosPhAt.

Authors:  Monika Zulawski; Rostyslav Braginets; Waltraud X Schulze
Journal:  Nucleic Acids Res       Date:  2012-11-20       Impact factor: 16.971

9.  Several wall-associated kinases participate positively and negatively in basal defense against rice blast fungus.

Authors:  Amandine Delteil; Enrico Gobbato; Bastien Cayrol; Joan Estevan; Corinne Michel-Romiti; Anne Dievart; Thomas Kroj; J-B Morel
Journal:  BMC Plant Biol       Date:  2016-01-16       Impact factor: 4.215

10.  Classification and Interactions of LRR Receptors and Co-receptors Within the Arabidopsis Plasma Membrane - An Overview.

Authors:  Lin Xi; Xu Na Wu; Max Gilbert; Waltraud X Schulze
Journal:  Front Plant Sci       Date:  2019-04-16       Impact factor: 5.753

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  1 in total

Review 1.  Phosphorylation of plant virus proteins: Analysis methods and biological functions.

Authors:  Xinjian Zhuang; Xiao Guo; Tianxiao Gu; Xiaowei Xu; Lang Qin; Kai Xu; Zhen He; Kun Zhang
Journal:  Front Microbiol       Date:  2022-07-26       Impact factor: 6.064

  1 in total

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