Literature DB >> 29199758

Reversible generation of coacervate droplets in an enzymatic network.

Karina K Nakashima1, Jochem F Baaij, Evan Spruijt.   

Abstract

Cells can control the assembly and disassembly of membraneless organelles by enzymatic processes, but similar control has not been achieved in vitro yet. Here we develop ATP-based coacervate droplets as artificial membraneless organelles that can be fully controlled by two cooperating enzymes. Droplets can be generated within a minute following the addition of phosphoenolpyruvate as a substrate, and they can be dissolved within tens of seconds by adding glucose as the second substrate. We show how the rates of droplet generation and dissolution can be tuned by varying the enzyme and substrate concentrations, and we support our findings with a kinetic model of the underlying enzymatic reaction network. As all steps of the coacervate droplet life cycle, including nucleation, coarsening, and dissolution, occur under the same reaction conditions, the cycle can be repeated multiple times. In addition, by carefully balancing the rates of both enzymatic reactions, our system can be programmed to either form or dissolve droplets at specified times, acting as a chemical timer.

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Year:  2018        PMID: 29199758     DOI: 10.1039/c7sm01897e

Source DB:  PubMed          Journal:  Soft Matter        ISSN: 1744-683X            Impact factor:   3.679


  26 in total

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2.  Liquid-liquid phase separation in artificial cells.

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3.  Chemical-mediated translocation in protocell-based microactuators.

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4.  Physical Principles and Extant Biology Reveal Roles for RNA-Containing Membraneless Compartments in Origins of Life Chemistry.

Authors:  Raghav R Poudyal; Fatma Pir Cakmak; Christine D Keating; Philip C Bevilacqua
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Review 5.  Biomolecular Phase Separation: From Molecular Driving Forces to Macroscopic Properties.

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Journal:  Chem       Date:  2020-10-21       Impact factor: 22.804

7.  Nonequilibrium Spatiotemporal Sensing within Acoustically Patterned Two-Dimensional Protocell Arrays.

Authors:  Liangfei Tian; Mei Li; Juntai Liu; Avinash J Patil; Bruce W Drinkwater; Stephen Mann
Journal:  ACS Cent Sci       Date:  2018-11-14       Impact factor: 18.728

8.  Heterogeneous Charged Complexes of Random Copolymers for the Segregation of Organic Molecules.

Authors:  Jeremy Wang; Curt Waltmann; Han Umana-Kossio; Monica Olvera de la Cruz; John M Torkelson
Journal:  ACS Cent Sci       Date:  2021-05-04       Impact factor: 14.553

9.  Template-directed RNA polymerization and enhanced ribozyme catalysis inside membraneless compartments formed by coacervates.

Authors:  Raghav R Poudyal; Rebecca M Guth-Metzler; Andrew J Veenis; Erica A Frankel; Christine D Keating; Philip C Bevilacqua
Journal:  Nat Commun       Date:  2019-01-30       Impact factor: 14.919

Review 10.  Connecting primitive phase separation to biotechnology, synthetic biology, and engineering.

Authors:  Tony Z Jia; Po-Hsiang Wang; Tatsuya Niwa; Irena Mamajanov
Journal:  J Biosci       Date:  2021       Impact factor: 1.826

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