Literature DB >> 29196569

Stem cells take the stairs.

Caroline Vissers1, Guo-Li Ming1,2,3, Hongjun Song4,2,3,5.   

Abstract

Human embryonic stem cells progress through multiple stages in their path to neural differentiation, but the steps taken along the way are difficult to distinguish, limiting our understanding of this important process. Jing and colleagues (2) now report comprehensive analyses of transcriptome dynamics during this process that reveal five discrete stages, defined in part by highly connected transcription factor networks that link progressive stages. Surprisingly, the third stage, which appears to be critical for neural fate commitment, depends almost entirely on intracellular signaling.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

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Year:  2017        PMID: 29196569      PMCID: PMC5712602          DOI: 10.1074/jbc.H117.796383

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  Single-Cell RNA-Seq with Waterfall Reveals Molecular Cascades underlying Adult Neurogenesis.

Authors:  Jaehoon Shin; Daniel A Berg; Yunhua Zhu; Joseph Y Shin; Juan Song; Michael A Bonaguidi; Grigori Enikolopov; David W Nauen; Kimberly M Christian; Guo-li Ming; Hongjun Song
Journal:  Cell Stem Cell       Date:  2015-08-20       Impact factor: 24.633

Review 2.  Transition states and cell fate decisions in epigenetic landscapes.

Authors:  Naomi Moris; Cristina Pina; Alfonso Martinez Arias
Journal:  Nat Rev Genet       Date:  2016-09-12       Impact factor: 53.242

3.  A Single-Cell Roadmap of Lineage Bifurcation in Human ESC Models of Embryonic Brain Development.

Authors:  Zizhen Yao; John K Mich; Sherman Ku; Vilas Menon; Anne-Rachel Krostag; Refugio A Martinez; Leon Furchtgott; Heather Mulholland; Susan Bort; Margaret A Fuqua; Ben W Gregor; Rebecca D Hodge; Anu Jayabalu; Ryan C May; Samuel Melton; Angelique M Nelson; N Kiet Ngo; Nadiya V Shapovalova; Soraya I Shehata; Michael W Smith; Leah J Tait; Carol L Thompson; Elliot R Thomsen; Chaoyang Ye; Ian A Glass; Ajamete Kaykas; Shuyuan Yao; John W Phillips; Joshua S Grimley; Boaz P Levi; Yanling Wang; Sharad Ramanathan
Journal:  Cell Stem Cell       Date:  2016-10-27       Impact factor: 24.633

4.  In vitro differentiation of transplantable neural precursors from human embryonic stem cells.

Authors:  S C Zhang; M Wernig; I D Duncan; O Brüstle; J A Thomson
Journal:  Nat Biotechnol       Date:  2001-12       Impact factor: 54.908

Review 5.  Epigenetic mechanisms in neurogenesis.

Authors:  Bing Yao; Kimberly M Christian; Chuan He; Peng Jin; Guo-Li Ming; Hongjun Song
Journal:  Nat Rev Neurosci       Date:  2016-06-23       Impact factor: 34.870

6.  Brain-Region-Specific Organoids Using Mini-bioreactors for Modeling ZIKV Exposure.

Authors:  Xuyu Qian; Ha Nam Nguyen; Mingxi M Song; Christopher Hadiono; Sarah C Ogden; Christy Hammack; Bing Yao; Gregory R Hamersky; Fadi Jacob; Chun Zhong; Ki-Jun Yoon; William Jeang; Li Lin; Yujing Li; Jai Thakor; Daniel A Berg; Ce Zhang; Eunchai Kang; Michael Chickering; David Nauen; Cheng-Ying Ho; Zhexing Wen; Kimberly M Christian; Pei-Yong Shi; Brady J Maher; Hao Wu; Peng Jin; Hengli Tang; Hongjun Song; Guo-Li Ming
Journal:  Cell       Date:  2016-04-22       Impact factor: 41.582

7.  Transcriptome analysis reveals determinant stages controlling human embryonic stem cell commitment to neuronal cells.

Authors:  Yuanyuan Li; Ran Wang; Nan Qiao; Guangdun Peng; Ke Zhang; Ke Tang; Jing-Dong J Han; Naihe Jing
Journal:  J Biol Chem       Date:  2017-09-26       Impact factor: 5.157

8.  Temporal Control of Mammalian Cortical Neurogenesis by m6A Methylation.

Authors:  Ki-Jun Yoon; Francisca Rojas Ringeling; Caroline Vissers; Fadi Jacob; Michael Pokrass; Dennisse Jimenez-Cyrus; Yijing Su; Nam-Shik Kim; Yunhua Zhu; Lily Zheng; Sunghan Kim; Xinyuan Wang; Louis C Doré; Peng Jin; Sergi Regot; Xiaoxi Zhuang; Stefan Canzar; Chuan He; Guo-Li Ming; Hongjun Song
Journal:  Cell       Date:  2017-09-28       Impact factor: 41.582

9.  The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells.

Authors:  Cole Trapnell; Davide Cacchiarelli; Jonna Grimsby; Prapti Pokharel; Shuqiang Li; Michael Morse; Niall J Lennon; Kenneth J Livak; Tarjei S Mikkelsen; John L Rinn
Journal:  Nat Biotechnol       Date:  2014-03-23       Impact factor: 54.908

10.  Time-Course Gene Expression Profiling Reveals a Novel Role of Non-Canonical WNT Signaling During Neural Induction.

Authors:  Cindy Tzu-Ling Huang; Yunlong Tao; Jianfeng Lu; Jeffrey R Jones; Lucas Fowler; Jason P Weick; Su-Chun Zhang
Journal:  Sci Rep       Date:  2016-09-07       Impact factor: 4.379

  10 in total

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