Literature DB >> 29170786

Recent advances in the use of microfluidic technologies for single cell analysis.

Travis W Murphy1, Qiang Zhang, Lynette B Naler, Sai Ma, Chang Lu.   

Abstract

The inherent heterogeneity in cell populations has become of great interest and importance as analytical techniques have improved over the past decades. With the advent of personalized medicine, understanding the impact of this heterogeneity has become an important challenge for the research community. Many different microfluidic approaches with varying levels of throughput and resolution exist to study single cell activity. In this review, we take a broad view of the recent microfluidic developments in single cell analysis based on microwell, microchamber, and droplet platforms. We cover physical, chemical, and molecular biology approaches for cellular and molecular analysis including newly emerging genome-wide analysis.

Entities:  

Year:  2017        PMID: 29170786      PMCID: PMC5839671          DOI: 10.1039/c7an01346a

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  273 in total

1.  Microfluidic devices for the high-throughput chemical analysis of cells.

Authors:  Maxine A McClain; Christopher T Culbertson; Stephen C Jacobson; Nancy L Allbritton; Christopher E Sims; J Michael Ramsey
Journal:  Anal Chem       Date:  2003-11-01       Impact factor: 6.986

2.  Microfluidic sorting of mammalian cells by optical force switching.

Authors:  Mark M Wang; Eugene Tu; Daniel E Raymond; Joon Mo Yang; Haichuan Zhang; Norbert Hagen; Bob Dees; Elinore M Mercer; Anita H Forster; Ilona Kariv; Philippe J Marchand; William F Butler
Journal:  Nat Biotechnol       Date:  2004-12-19       Impact factor: 54.908

3.  Combined dielectrophoresis-Raman setup for the classification of pathogens recovered from the urinary tract.

Authors:  Ulrich-Christian Schröder; Anuradha Ramoji; Uwe Glaser; Svea Sachse; Christian Leiterer; Andrea Csaki; Uwe Hübner; Wolfgang Fritzsche; Wolfgang Pfister; Michael Bauer; Jürgen Popp; Ute Neugebauer
Journal:  Anal Chem       Date:  2013-11-06       Impact factor: 6.986

4.  Single cell impedance cytometry for identification and counting of CD4 T-cells in human blood using impedance labels.

Authors:  David Holmes; Hywel Morgan
Journal:  Anal Chem       Date:  2010-02-15       Impact factor: 6.986

5.  Highly efficient and gentle trapping of single cells in large microfluidic arrays for time-lapse experiments.

Authors:  F Yesilkoy; R Ueno; B X E Desbiolles; M Grisi; Y Sakai; B J Kim; J Brugger
Journal:  Biomicrofluidics       Date:  2016-02-19       Impact factor: 2.800

6.  In situ SERS probing of nano-silver coated individual yeast cells.

Authors:  Adam F Chrimes; Khashayar Khoshmanesh; Shi-Yang Tang; Bayden R Wood; Paul R Stoddart; Sean S E Collins; Arnan Mitchell; Kourosh Kalantar-zadeh
Journal:  Biosens Bioelectron       Date:  2013-06-07       Impact factor: 10.618

7.  Study of Phospholipids in Single Cells Using an Integrated Microfluidic Device Combined with Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry.

Authors:  Weiyi Xie; Dan Gao; Feng Jin; Yuyang Jiang; Hongxia Liu
Journal:  Anal Chem       Date:  2015-07-02       Impact factor: 6.986

8.  Raman-activated cell sorting based on dielectrophoretic single-cell trap and release.

Authors:  Peiran Zhang; Lihui Ren; Xu Zhang; Yufei Shan; Yun Wang; Yuetong Ji; Huabing Yin; Wei E Huang; Jian Xu; Bo Ma
Journal:  Anal Chem       Date:  2015-02-04       Impact factor: 6.986

9.  A microfluidic platform for systems pathology: multiparameter single-cell signaling measurements of clinical brain tumor specimens.

Authors:  Jing Sun; Michael D Masterman-Smith; Nicholas A Graham; Jing Jiao; Jack Mottahedeh; Dan R Laks; Minori Ohashi; Jason DeJesus; Ken-ichiro Kamei; Ki-Bum Lee; Hao Wang; Zeta T F Yu; Yi-Tsung Lu; Shuang Hou; Keyu Li; Max Liu; Nangang Zhang; Shutao Wang; Brigitte Angenieux; Eduard Panosyan; Eric R Samuels; Jun Park; Dirk Williams; Vera Konkankit; David Nathanson; R Michael van Dam; Michael E Phelps; Hong Wu; Linda M Liau; Paul S Mischel; Jorge A Lazareff; Harley I Kornblum; William H Yong; Thomas G Graeber; Hsian-Rong Tseng
Journal:  Cancer Res       Date:  2010-07-14       Impact factor: 12.701

10.  Digital microfluidic immunocytochemistry in single cells.

Authors:  Alphonsus H C Ng; M Dean Chamberlain; Haozhong Situ; Victor Lee; Aaron R Wheeler
Journal:  Nat Commun       Date:  2015-06-24       Impact factor: 14.919

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  24 in total

Review 1.  Exploring the Fundamental Structures of Life: Non-Targeted, Chemical Analysis of Single Cells and Subcellular Structures.

Authors:  Elizabeth K Neumann; Thanh D Do; Troy J Comi; Jonathan V Sweedler
Journal:  Angew Chem Int Ed Engl       Date:  2019-04-11       Impact factor: 15.336

Review 2.  Biophysics and the Genomic Sciences.

Authors:  David C Schwartz
Journal:  Biophys J       Date:  2019-07-30       Impact factor: 4.033

3.  Is microfluidics the "assembly line" for CRISPR-Cas9 gene-editing?

Authors:  Fatemeh Ahmadi; Angela B V Quach; Steve C C Shih
Journal:  Biomicrofluidics       Date:  2020-11-24       Impact factor: 2.800

4.  A simple microdevice for single cell capture, array, release, and fast staining using oscillatory method.

Authors:  Dantong Cheng; Yang Yu; Chao Han; Mengjia Cao; Guang Yang; Jingquan Liu; Xiang Chen; Zhihai Peng
Journal:  Biomicrofluidics       Date:  2018-05-16       Impact factor: 2.800

5.  Microfluidic Low-Input Fluidized-Bed Enabled ChIP-seq Device for Automated and Parallel Analysis of Histone Modifications.

Authors:  Travis W Murphy; Yuan-Pang Hsieh; Sai Ma; Yan Zhu; Chang Lu
Journal:  Anal Chem       Date:  2018-06-08       Impact factor: 6.986

Review 6.  Spatially Resolved Analytical Chemistry in Intact, Living Tissues.

Authors:  Maura C Belanger; Parastoo Anbaei; Austin F Dunn; Andrew W L Kinman; Rebecca R Pompano
Journal:  Anal Chem       Date:  2020-11-17       Impact factor: 6.986

7.  Population-based analysis of cell-penetrating peptide uptake using a microfluidic droplet trapping array.

Authors:  Nora Safa; Manibarathi Vaithiyanathan; Shayan Sombolestani; Seleipiri Charles; Adam T Melvin
Journal:  Anal Bioanal Chem       Date:  2019-03-11       Impact factor: 4.142

8.  Enhanced sample filling and discretization in thermoplastic 2D microwell arrays using asymmetric contact angles.

Authors:  S Padmanabhan; J Y Han; I Nanayankkara; K Tran; P Ho; N Mesfin; I White; D L DeVoe
Journal:  Biomicrofluidics       Date:  2020-02-18       Impact factor: 2.800

Review 9.  Microfluidic epigenomic mapping technologies for precision medicine.

Authors:  Chengyu Deng; Lynette B Naler; Chang Lu
Journal:  Lab Chip       Date:  2019-07-24       Impact factor: 6.799

10.  Microfluidic Platform for Next-Generation Sequencing Library Preparation with Low-Input Samples.

Authors:  Travis W Murphy; Yuan-Pang Hsieh; Bohan Zhu; Lynette B Naler; Chang Lu
Journal:  Anal Chem       Date:  2020-01-14       Impact factor: 6.986

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