Literature DB >> 30500998

Exploring the Fundamental Structures of Life: Non-Targeted, Chemical Analysis of Single Cells and Subcellular Structures.

Elizabeth K Neumann1, Thanh D Do2, Troy J Comi1, Jonathan V Sweedler1.   

Abstract

Cells are a basic functional and structural unit of living organisms. Both unicellular communities and multicellular species produce an astonishing chemical diversity, enabling a wide range of divergent functions, yet each cell shares numerous aspects that are common to all living organisms. While there are many approaches for studying this chemical diversity, only a few are non-targeted and capable of analyzing hundreds of different chemicals at cellular resolution. Here, we review the non-targeted approaches used to perform comprehensive chemical analyses, provide chemical imaging information, or obtain high-throughput single-cell profiling data. Single-cell measurement capabilities are rapidly increasing in terms of throughput, limits of detection, and completeness of the chemical analyses; these improvements enable their application to understand ever more complex physiological phenomena, such as learning, memory, and behavior.
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  analytical methods; bioanalysis; imaging; mass spectrometry; single-cell analysis

Mesh:

Year:  2019        PMID: 30500998      PMCID: PMC6542728          DOI: 10.1002/anie.201811951

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  150 in total

Review 1.  Single-cell MALDI: a new tool for direct peptide profiling.

Authors:  L Li; R W Garden; J V Sweedler
Journal:  Trends Biotechnol       Date:  2000-04       Impact factor: 19.536

2.  Methane-consuming archaea revealed by directly coupled isotopic and phylogenetic analysis.

Authors:  V J Orphan; C H House; K U Hinrichs; K D McKeegan; E F DeLong
Journal:  Science       Date:  2001-07-20       Impact factor: 47.728

3.  Imaging with mass spectrometry.

Authors:  M L Pacholski; N Winograd
Journal:  Chem Rev       Date:  1999-10-13       Impact factor: 60.622

4.  Spatial control of cellular measurements with the laser micropipet.

Authors:  H Li; C E Sims; H Y Wu; N L Allbritton
Journal:  Anal Chem       Date:  2001-10-01       Impact factor: 6.986

5.  Determination of tobacco alkaloids in single plant cells by capillary electrophoresis.

Authors:  H Lochmann; A Bazzanella; S Kropsch; K Bächmann
Journal:  J Chromatogr A       Date:  2001-05-11       Impact factor: 4.759

6.  Peptide profiling of cells with multiple gene products: combining immunochemistry and MALDI mass spectrometry with on-plate microextraction.

Authors:  L Li; E V Romanova; S S Rubakhin; V Alexeeva; K R Weiss; F S Vilim; J V Sweedler
Journal:  Anal Chem       Date:  2000-08-15       Impact factor: 6.986

7.  In situ sequencing of peptides from biological tissues and single cells using MALDI-PSD/CID analysis.

Authors:  L Li; R W Garden; E V Romanova; J V Sweedler
Journal:  Anal Chem       Date:  1999-12-15       Impact factor: 6.986

8.  Small cardioactive peptide gene: structure, expression and mass spectrometric analysis reveals a complex pattern of co-transmitters in a snail feeding neuron.

Authors:  S J Perry; A C Dobbins; M G Schofield; M R Piper; P R Benjamin
Journal:  Eur J Neurosci       Date:  1999-02       Impact factor: 3.386

9.  Dynamic secondary ion mass spectrometry analysis of boron from boron neutron capture therapy drugs in co-cultures: single-cell imaging of two different cell types within the same ion microscopy field of imaging.

Authors:  D R Lorey; G H Morrison; S Chandra
Journal:  Anal Chem       Date:  2001-08-15       Impact factor: 6.986

10.  Insulin prohormone processing, distribution, and relation to metabolism in Aplysia californica.

Authors:  P D Floyd; L Li; S S Rubakhin; J V Sweedler; C C Horn; I Kupfermann; V Y Alexeeva; T A Ellis; N C Dembrow; K R Weiss; F S Vilim
Journal:  J Neurosci       Date:  1999-09-15       Impact factor: 6.167

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  12 in total

1.  Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry.

Authors:  Elizabeth K Neumann; Joseph F Ellis; Amelia E Triplett; Stanislav S Rubakhin; Jonathan V Sweedler
Journal:  Anal Chem       Date:  2019-06-07       Impact factor: 6.986

Review 2.  Mass Spectrometry Approaches Empowering Neuropeptide Discovery and Therapeutics.

Authors:  Krishna D B Anapindi; Elena V Romanova; James W Checco; Jonathan V Sweedler
Journal:  Pharmacol Rev       Date:  2022-07       Impact factor: 18.923

3.  Preserving Single Cells in Space and Time for Analytical Assays.

Authors:  Luke A Gallion; Matthew M Anttila; David H Abraham; Angela Proctor; Nancy L Allbritton
Journal:  Trends Analyt Chem       Date:  2019-11-07       Impact factor: 12.296

4.  Single-Cell Classification Using Mass Spectrometry through Interpretable Machine Learning.

Authors:  Yuxuan Richard Xie; Daniel C Castro; Sara E Bell; Stanislav S Rubakhin; Jonathan V Sweedler
Journal:  Anal Chem       Date:  2020-06-25       Impact factor: 6.986

5.  Single-cell lipidomics with high structural specificity by mass spectrometry.

Authors:  Zishuai Li; Simin Cheng; Qiaohong Lin; Wenbo Cao; Jing Yang; Minmin Zhang; Aijun Shen; Wenpeng Zhang; Yu Xia; Xiaoxiao Ma; Zheng Ouyang
Journal:  Nat Commun       Date:  2021-05-17       Impact factor: 14.919

Review 6.  Multimodal Imaging Mass Spectrometry: Next Generation Molecular Mapping in Biology and Medicine.

Authors:  Elizabeth K Neumann; Katerina V Djambazova; Richard M Caprioli; Jeffrey M Spraggins
Journal:  J Am Soc Mass Spectrom       Date:  2020-09-04       Impact factor: 3.262

7.  Protocol for multimodal analysis of human kidney tissue by imaging mass spectrometry and CODEX multiplexed immunofluorescence.

Authors:  Elizabeth K Neumann; Nathan Heath Patterson; Jamie L Allen; Lukasz G Migas; Haichun Yang; Maya Brewer; David M Anderson; Jennifer Harvey; Danielle B Gutierrez; Raymond C Harris; Mark P deCaestecker; Agnes B Fogo; Raf Van de Plas; Richard M Caprioli; Jeffrey M Spraggins
Journal:  STAR Protoc       Date:  2021-08-13

8.  Phospholipid Profiles for Phenotypic Characterization of Adipose-Derived Multipotent Mesenchymal Stromal Cells.

Authors:  Janina Burk; Michaela Melzer; Alina Hagen; Katrin Susanne Lips; Katja Trinkaus; Ariane Nimptsch; Jenny Leopold
Journal:  Front Cell Dev Biol       Date:  2021-12-01

9.  Single-cell identification by microfluidic-based in situ extracting and online mass spectrometric analysis of phospholipids expression.

Authors:  Qiushi Huang; Sifeng Mao; Mashooq Khan; Weiwei Li; Qiang Zhang; Jin-Ming Lin
Journal:  Chem Sci       Date:  2019-11-11       Impact factor: 9.825

10.  Laser cleavable probes for in situ multiplexed glycan detection by single cell mass spectrometry.

Authors:  Jing Han; Xi Huang; Huihui Liu; Jiyun Wang; Caiqiao Xiong; Zongxiu Nie
Journal:  Chem Sci       Date:  2019-10-17       Impact factor: 9.825

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