Literature DB >> 33262863

Is microfluidics the "assembly line" for CRISPR-Cas9 gene-editing?

Fatemeh Ahmadi, Angela B V Quach, Steve C C Shih.   

Abstract

Acclaimed as one of the biggest scientific breakthroughs, the technology of CRISPR has brought significant improvement in the biotechnological spectrum-from editing genetic defects in diseases for gene therapy to modifying organisms for the production of biofuels. Since its inception, the CRISPR-Cas9 system has become easier and more versatile to use. Many variants have been found, giving the CRISPR toolkit a great range that includes the activation and repression of genes aside from the previously known knockout and knockin of genes. Here, in this Perspective, we describe efforts on automating the gene-editing workflow, with particular emphasis given on the use of microfluidic technology. We discuss how automation can address the limitations of gene-editing and how the marriage between microfluidics and gene-editing will expand the application space of CRISPR.
© 2020 Author(s).

Year:  2020        PMID: 33262863      PMCID: PMC7688342          DOI: 10.1063/5.0029846

Source DB:  PubMed          Journal:  Biomicrofluidics        ISSN: 1932-1058            Impact factor:   2.800


  97 in total

Review 1.  Single-Cell Analysis Using Droplet Microfluidics.

Authors:  Kinga Matuła; Francesca Rivello; Wilhelm T S Huck
Journal:  Adv Biosyst       Date:  2019-11-26

Review 2.  The next generation of CRISPR-Cas technologies and applications.

Authors:  Adrian Pickar-Oliver; Charles A Gersbach
Journal:  Nat Rev Mol Cell Biol       Date:  2019-08       Impact factor: 94.444

3.  A Versatile Microfluidic Device for Automating Synthetic Biology.

Authors:  Steve C C Shih; Garima Goyal; Peter W Kim; Nicolas Koutsoubelis; Jay D Keasling; Paul D Adams; Nathan J Hillson; Anup K Singh
Journal:  ACS Synth Biol       Date:  2015-06-15       Impact factor: 5.110

4.  An automated microfluidic gene-editing platform for deciphering cancer genes.

Authors:  Hugo Sinha; Angela B V Quach; Philippe Q N Vo; Steve C C Shih
Journal:  Lab Chip       Date:  2018-07-24       Impact factor: 6.799

5.  Breaking the code of DNA binding specificity of TAL-type III effectors.

Authors:  Jens Boch; Heidi Scholze; Sebastian Schornack; Angelika Landgraf; Simone Hahn; Sabine Kay; Thomas Lahaye; Anja Nickstadt; Ulla Bonas
Journal:  Science       Date:  2009-12-11       Impact factor: 47.728

6.  High-throughput single-cell activity-based screening and sequencing of antibodies using droplet microfluidics.

Authors:  Adam Woolfe; Guillaume Mottet; Marcel Reichen; Carlos Castrillon; Vera Menrath; Sami Ellouze; Adeline Poitou; Raphaël Doineau; Annabelle Gérard; Luis Briseno-Roa; Pablo Canales-Herrerias; Pascaline Mary; Gregory Rose; Charina Ortega; Matthieu Delincé; Sosthene Essono; Bin Jia; Bruno Iannascoli; Odile Richard-Le Goff; Roshan Kumar; Samantha N Stewart; Yannick Pousse; Bingqing Shen; Kevin Grosselin; Baptiste Saudemont; Antoine Sautel-Caillé; Alexei Godina; Scott McNamara; Klaus Eyer; Gaël A Millot; Jean Baudry; Patrick England; Clément Nizak; Allan Jensen; Andrew D Griffiths; Pierre Bruhns; Colin Brenan
Journal:  Nat Biotechnol       Date:  2020-03-30       Impact factor: 54.908

7.  Combining microfluidics, optogenetics and calcium imaging to study neuronal communication in vitro.

Authors:  Renaud Renault; Nirit Sukenik; Stéphanie Descroix; Laurent Malaquin; Jean-Louis Viovy; Jean-Michel Peyrin; Samuel Bottani; Pascal Monceau; Elisha Moses; Maéva Vignes
Journal:  PLoS One       Date:  2015-04-22       Impact factor: 3.240

8.  Building a global alliance of biofoundries.

Authors:  Nathan Hillson; Mark Caddick; Yizhi Cai; Jose A Carrasco; Matthew Wook Chang; Natalie C Curach; David J Bell; Rosalind Le Feuvre; Douglas C Friedman; Xiongfei Fu; Nicholas D Gold; Markus J Herrgård; Maciej B Holowko; James R Johnson; Richard A Johnson; Jay D Keasling; Richard I Kitney; Akihiko Kondo; Chenli Liu; Vincent J J Martin; Filippo Menolascina; Chiaki Ogino; Nicola J Patron; Marilene Pavan; Chueh Loo Poh; Isak S Pretorius; Susan J Rosser; Nigel S Scrutton; Marko Storch; Hille Tekotte; Evelyn Travnik; Claudia E Vickers; Wen Shan Yew; Yingjin Yuan; Huimin Zhao; Paul S Freemont
Journal:  Nat Commun       Date:  2019-05-09       Impact factor: 14.919

9.  Microfluidic Cell Deformability Assay for Rapid and Efficient Kinase Screening with the CRISPR-Cas9 System.

Authors:  Xin Han; Zongbin Liu; Li Zhao; Feng Wang; Yang Yu; Jianhua Yang; Rui Chen; Lidong Qin
Journal:  Angew Chem Int Ed Engl       Date:  2016-06-03       Impact factor: 15.336

Review 10.  Droplet Microfluidics-Enabled High-Throughput Screening for Protein Engineering.

Authors:  Lindong Weng; James E Spoonamore
Journal:  Micromachines (Basel)       Date:  2019-10-29       Impact factor: 2.891

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  2 in total

Review 1.  Powerful CRISPR-Based Biosensing Techniques and Their Integration With Microfluidic Platforms.

Authors:  Bing Chen; Ya Li; Feng Xu; Xiaonan Yang
Journal:  Front Bioeng Biotechnol       Date:  2022-02-23

2.  Microfluidic-Based Cationic Cholesterol Lipid siRNA Delivery Nanosystem: Highly Efficient In Vitro Gene Silencing and the Intracellular Behavior.

Authors:  Zhaoyuan Zhu; Li Zhang; Ruilong Sheng; Jian Chen
Journal:  Int J Mol Sci       Date:  2022-04-03       Impact factor: 5.923

  2 in total

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