Literature DB >> 29161433

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework.

Aziz Khan1, Oriol Fornes2, Arnaud Stigliani3, Marius Gheorghe1, Jaime A Castro-Mondragon1, Robin van der Lee2, Adrien Bessy3, Jeanne Chèneby4,5, Shubhada R Kulkarni6,7,8, Ge Tan9,10, Damir Baranasic9,10, David J Arenillas2, Albin Sandelin11, Klaas Vandepoele6,7,8, Boris Lenhard9,10,12, Benoît Ballester4,5, Wyeth W Wasserman2, François Parcy3, Anthony Mathelier1,13.   

Abstract

Year:  2018        PMID： 29161433      PMCID： PMC5753202          DOI： 10.1093/nar/gkx1188

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


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  142 in total

1.  Dietary Adaptation of Microbiota in Drosophila Requires NF-κB-Dependent Control of the Translational Regulator 4E-BP.

Authors:  Crissie Vandehoef; Maral Molaei; Jason Karpac
Journal:  Cell Rep       Date:  2020-06-09       Impact factor: 9.423

2.  Mitoxantrone triggers immunogenic prostate cancer cell death via p53-dependent PERK expression.

Authors:  Changlin Li; Hui Sun; Wei Wei; Qiuzi Liu; Yinglei Wang; Ying Zhang; Fuming Lian; Fangchao Liu; Chenchen Li; Kaicheng Ying; Hang Huo; Zhi Qi; Benyi Li
Journal:  Cell Oncol (Dordr)       Date:  2020-07-24       Impact factor: 6.730

Review 3.  Towards a comprehensive catalogue of validated and target-linked human enhancers.

Authors:  Molly Gasperini; Jacob M Tome; Jay Shendure
Journal:  Nat Rev Genet       Date:  2020-01-27       Impact factor: 53.242

Review 4.  Mechanisms of NRF2 activation to mediate fetal hemoglobin induction and protection against oxidative stress in sickle cell disease.

Authors:  Xingguo Zhu; Aluya R Oseghale; Lopez H Nicole; Biaoru Li; Betty S Pace
Journal:  Exp Biol Med (Maywood)       Date:  2019-01-23

5.  DLX6-AS1/miR-204-5p/OCT1 positive feedback loop promotes tumor progression and epithelial-mesenchymal transition in gastric cancer.

Authors:  Yu Liang; Chun-Dong Zhang; Cheng Zhang; Dong-Qiu Dai
Journal:  Gastric Cancer       Date:  2019-08-28       Impact factor: 7.370

6.  Biocontrol strain Aspergillus flavus WRRL 1519 has differences in chromosomal organization and an increased number of transposon-like elements compared to other strains.

Authors:  Kayla K Pennerman; Johanny Gonzalez; Lydia R Chenoweth; Joan W Bennett; Guohua Yin; Sui Sheng T Hua
Journal:  Mol Genet Genomics       Date:  2018-08-11       Impact factor: 3.291

7.  The transcription factor REST up-regulates tyrosine hydroxylase and antiapoptotic genes and protects dopaminergic neurons against manganese toxicity.

Authors:  Edward Pajarillo; Asha Rizor; Deok-Soo Son; Michael Aschner; Eunsook Lee
Journal:  J Biol Chem       Date:  2020-01-30       Impact factor: 5.157

8.  Transcription Factor Motifs Associated with Anterior Insula Gene Expression Underlying Mood Disorder Phenotypes.

Authors:  Dhivya Arasappan; Simon B Eickhoff; Charles B Nemeroff; Hans A Hofmann; Mbemba Jabbi
Journal:  Mol Neurobiol       Date:  2021-01-07       Impact factor: 5.590

9.  Mitochondrial Reprogramming Underlies Resistance to BCL-2 Inhibition in Lymphoid Malignancies.

Authors:  Romain Guièze; Vivian M Liu; Daniel Rosebrock; Alexis A Jourdain; María Hernández-Sánchez; Aina Martinez Zurita; Jing Sun; Elisa Ten Hacken; Kaitlyn Baranowski; Philip A Thompson; Jin-Mi Heo; Zachary Cartun; Ozan Aygün; J Bryan Iorgulescu; Wandi Zhang; Giulia Notarangelo; Dimitri Livitz; Shuqiang Li; Matthew S Davids; Anat Biran; Stacey M Fernandes; Jennifer R Brown; Ana Lako; Zoe B Ciantra; Matthew A Lawlor; Derin B Keskin; Namrata D Udeshi; William G Wierda; Kenneth J Livak; Anthony G Letai; Donna Neuberg; J Wade Harper; Steven A Carr; Federica Piccioni; Christopher J Ott; Ignaty Leshchiner; Cory M Johannessen; John Doench; Vamsi K Mootha; Gad Getz; Catherine J Wu
Journal:  Cancer Cell       Date:  2019-09-19       Impact factor: 31.743

10.  IRF5 regulates unique subset of genes in dendritic cells during West Nile virus infection.

Authors:  Kwan T Chow; Connor Driscoll; Yueh-Ming Loo; Megan Knoll; Michael Gale
Journal:  J Leukoc Biol       Date:  2018-11-20       Impact factor: 4.962
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