Literature DB >> 34088870

Mapping of m6A and Its Regulatory Targets in Prostate Cancer Reveals a METTL3-Low Induction of Therapy Resistance.

Kellie A Cotter1, John Gallon2, Nadine Uebersax1, Philip Rubin1, Kate D Meyer3,4, Salvatore Piscuoglio2,5,6, Samie R Jaffrey7, Mark A Rubin8,9,10.   

Abstract

Recent evidence has highlighted the role of N 6-methyladenosine (m6A) in the regulation of mRNA expression, stability, and translation, supporting a potential role for posttranscriptional regulation mediated by m6A in cancer. Here, we explore prostate cancer as an exemplar and demonstrate that low levels of N 6-adenosine-methyltransferase (METTL3) is associated with advanced metastatic disease. To investigate this relationship, we generated the first prostate m6A maps, and further examined how METTL3 regulates expression at the level of transcription, translation, and protein. Significantly, transcripts encoding extracellular matrix proteins are consistently upregulated with METTL3 knockdown. We also examined the relationship between METTL3 and androgen signaling and discovered the upregulation of a hepatocyte nuclear factor-driven gene signature that is associated with therapy resistance in prostate cancer. Significantly, METTL3 knockdown rendered the cells resistant to androgen receptor antagonists via an androgen receptor-independent mechanism driven by the upregulation of nuclear receptor NR5A2/LRH-1. IMPLICATIONS: These findings implicate changes in m6A as a mechanism for therapy resistance in metastatic prostate cancer. ©2021 The Authors; Published by the American Association for Cancer Research.

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Year:  2021        PMID: 34088870      PMCID: PMC8349875          DOI: 10.1158/1541-7786.MCR-21-0014

Source DB:  PubMed          Journal:  Mol Cancer Res        ISSN: 1541-7786            Impact factor:   6.333


  69 in total

1.  Absolute quantification of proteins by LCMSE: a virtue of parallel MS acquisition.

Authors:  Jeffrey C Silva; Marc V Gorenstein; Guo-Zhong Li; Johannes P C Vissers; Scott J Geromanos
Journal:  Mol Cell Proteomics       Date:  2005-10-11       Impact factor: 5.911

2.  Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.

Authors:  Kate D Meyer; Yogesh Saletore; Paul Zumbo; Olivier Elemento; Christopher E Mason; Samie R Jaffrey
Journal:  Cell       Date:  2012-05-17       Impact factor: 41.582

3.  Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer.

Authors:  Christopher E Barbieri; Sylvan C Baca; Michael S Lawrence; Francesca Demichelis; Mirjam Blattner; Jean-Philippe Theurillat; Thomas A White; Petar Stojanov; Eliezer Van Allen; Nicolas Stransky; Elizabeth Nickerson; Sung-Suk Chae; Gunther Boysen; Daniel Auclair; Robert C Onofrio; Kyung Park; Naoki Kitabayashi; Theresa Y MacDonald; Karen Sheikh; Terry Vuong; Candace Guiducci; Kristian Cibulskis; Andrey Sivachenko; Scott L Carter; Gordon Saksena; Douglas Voet; Wasay M Hussain; Alex H Ramos; Wendy Winckler; Michelle C Redman; Kristin Ardlie; Ashutosh K Tewari; Juan Miguel Mosquera; Niels Rupp; Peter J Wild; Holger Moch; Colm Morrissey; Peter S Nelson; Philip W Kantoff; Stacey B Gabriel; Todd R Golub; Matthew Meyerson; Eric S Lander; Gad Getz; Mark A Rubin; Levi A Garraway
Journal:  Nat Genet       Date:  2012-05-20       Impact factor: 38.330

4.  N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells.

Authors:  Yang Wang; Yue Li; Julia I Toth; Matthew D Petroski; Zhaolei Zhang; Jing Crystal Zhao
Journal:  Nat Cell Biol       Date:  2014-01-07       Impact factor: 28.824

5.  Silencing LRH-1 in colon cancer cell lines impairs proliferation and alters gene expression programs.

Authors:  James R Bayrer; Sridevi Mukkamala; Elena P Sablin; Paul Webb; Robert J Fletterick
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-09       Impact factor: 11.205

6.  LRH-1 governs vital transcriptional programs in endocrine-sensitive and -resistant breast cancer cells.

Authors:  Stéphanie Bianco; Mylène Brunelle; Maïka Jangal; Luca Magnani; Nicolas Gévry
Journal:  Cancer Res       Date:  2014-02-11       Impact factor: 12.701

7.  Aberrant Activation of a Gastrointestinal Transcriptional Circuit in Prostate Cancer Mediates Castration Resistance.

Authors:  Shipra Shukla; Joanna Cyrta; Devan A Murphy; Edward G Walczak; Leili Ran; Praveen Agrawal; Yuanyuan Xie; Yuedan Chen; Shangqian Wang; Yu Zhan; Dan Li; Elissa W P Wong; Andrea Sboner; Himisha Beltran; Juan Miguel Mosquera; Jessica Sher; Zhen Cao; John Wongvipat; Richard P Koche; Anuradha Gopalan; Deyou Zheng; Mark A Rubin; Howard I Scher; Ping Chi; Yu Chen
Journal:  Cancer Cell       Date:  2017-11-16       Impact factor: 31.743

8.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

9.  Analysis of 100,000 human cancer genomes reveals the landscape of tumor mutational burden.

Authors:  Zachary R Chalmers; Caitlin F Connelly; David Fabrizio; Laurie Gay; Siraj M Ali; Riley Ennis; Alexa Schrock; Brittany Campbell; Adam Shlien; Juliann Chmielecki; Franklin Huang; Yuting He; James Sun; Uri Tabori; Mark Kennedy; Daniel S Lieber; Steven Roels; Jared White; Geoffrey A Otto; Jeffrey S Ross; Levi Garraway; Vincent A Miller; Phillip J Stephens; Garrett M Frampton
Journal:  Genome Med       Date:  2017-04-19       Impact factor: 11.117

10.  Riborex: fast and flexible identification of differential translation from Ribo-seq data.

Authors:  Wenzheng Li; Weili Wang; Philip J Uren; Luiz O F Penalva; Andrew D Smith
Journal:  Bioinformatics       Date:  2017-06-01       Impact factor: 6.937

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  5 in total

1.  A m6Avalue predictive of prostate cancer stemness, tumor immune landscape and immunotherapy response.

Authors:  Cheng Zou; Qinju He; Yuqing Feng; Mengjie Chen; Dingxiao Zhang
Journal:  NAR Cancer       Date:  2022-03-25

2.  Small-Molecule Ebselen Binds to YTHDF Proteins Interfering with the Recognition of N 6-Methyladenosine-Modified RNAs.

Authors:  Mariachiara Micaelli; Andrea Dalle Vedove; Linda Cerofolini; Jacopo Vigna; Denise Sighel; Sara Zaccara; Isabelle Bonomo; Georgios Poulentzas; Emanuele Filiberto Rosatti; Giulia Cazzanelli; Laura Alunno; Romina Belli; Daniele Peroni; Erik Dassi; Shino Murakami; Samie R Jaffrey; Marco Fragai; Ines Mancini; Graziano Lolli; Alessandro Quattrone; Alessandro Provenzani
Journal:  ACS Pharmacol Transl Sci       Date:  2022-09-14

3.  ELAVL1 promotes prostate cancer progression by interacting with other m6A regulators.

Authors:  Zhonglin Cai; Huan Xu; Gang Bai; Hanjing Hu; Di Wang; Hongjun Li; Zhong Wang
Journal:  Front Oncol       Date:  2022-08-01       Impact factor: 5.738

Review 4.  Role of m6A writers, erasers and readers in cancer.

Authors:  Zhen Fang; Wentong Mei; Chang Qu; Jiongdi Lu; Liang Shang; Feng Cao; Fei Li
Journal:  Exp Hematol Oncol       Date:  2022-08-09

5.  Construction of a risk prediction model using m6A RNA methylation regulators in prostate cancer: comprehensive bioinformatic analysis and histological validation.

Authors:  Yongjun Quan; Xiaodong Zhang; Hao Ping
Journal:  Cancer Cell Int       Date:  2022-01-19       Impact factor: 5.722

  5 in total

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