Literature DB >> 29141913

Multiplexed Biomarker Panels Discriminate Zika and Dengue Virus Infection in Humans.

Guang Song1, Hee-Sool Rho1, Jianbo Pan2, Pedro Ramos3, Ki-Jun Yoon4,5, Freddy A Medina6, Emily M Lee7, Daniel Eichinger3, Guo-Li Ming4,5,8,9,10, Jorge L Muñoz-Jordan6, Hengli Tang7, Ignacio Pino3, Hongjun Song4,5,8,9,10, Jiang Qian2, Heng Zhu11.   

Abstract

Zika virus (ZIKV) and dengue virus (DENV) are closely related flaviviruses that cause widespread, acute febrile illnesses, notably microcephaly for fetuses of infected pregnant women. Detecting the viral cause of these illnesses is paramount to determine risks to patients, counsel pregnant women, and help fight outbreaks. A combined diagnostic algorithm for ZIKV and DENV requires Reverse transcription polymerase chain reaction (RT-PCR) and IgM antibody detection. RT-PCR differentiates between DENV and ZIKV infections during the acute phases of infection, but differentiation based on IgM antibodies is currently nearly impossible in endemic areas. We have developed a ZIKV/DENV protein array and tested it with serum samples collected from ZIKV- and DENV-infected patients and healthy subjects in Puerto Rico. Our analyses reveal a biomarker panel that are capable of discriminating ZIKV and DENV infections with high accuracy, including Capsid protein from African ZIKV strain MR766, and other 5 pair of proteins (NS1, NS2A, NS3, NS4B and NS5) from ZIKV and DENV respectively. Both sensitivity and specificity of the test for ZIKV from DENV are around 90%. We propose that the ZIKV/DENV protein array will be used in future studies to discriminate patients infected with ZIKV from DENV.
© 2018 by The American Society for Biochemistry and Molecular Biology, Inc.

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Year:  2017        PMID: 29141913      PMCID: PMC5795396          DOI: 10.1074/mcp.RA117.000310

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  18 in total

1.  GenePattern 2.0.

Authors:  Michael Reich; Ted Liefeld; Joshua Gould; Jim Lerner; Pablo Tamayo; Jill P Mesirov
Journal:  Nat Genet       Date:  2006-05       Impact factor: 38.330

2.  Diagnosis of Zika virus infection on a nanotechnology platform.

Authors:  Bo Zhang; Benjamin A Pinsky; Jeyarama S Ananta; Su Zhao; Shylaja Arulkumar; Hao Wan; Malaya K Sahoo; Janaki Abeynayake; Jesse J Waggoner; Clay Hopes; Meijie Tang; Hongjie Dai
Journal:  Nat Med       Date:  2017-03-06       Impact factor: 53.440

3.  Protein array identification of substrates of the Epstein-Barr virus protein kinase BGLF4.

Authors:  Jian Zhu; Gangling Liao; Liang Shan; Jun Zhang; Mei-Ru Chen; Gary S Hayward; S Diane Hayward; Prashant Desai; Heng Zhu
Journal:  J Virol       Date:  2009-02-25       Impact factor: 5.103

4.  Novel systemic lupus erythematosus autoantigens identified by human protein microarray technology.

Authors:  Wei Huang; Chaojun Hu; Haipan Zeng; Ping Li; Lei Guo; Xiaofeng Zeng; Guozhen Liu; Fengchun Zhang; Yongzhe Li; Lin Wu
Journal:  Biochem Biophys Res Commun       Date:  2012-01-09       Impact factor: 3.575

5.  Global analysis of protein activities using proteome chips.

Authors:  H Zhu; M Bilgin; R Bangham; D Hall; A Casamayor; P Bertone; N Lan; R Jansen; S Bidlingmaier; T Houfek; T Mitchell; P Miller; R A Dean; M Gerstein; M Snyder
Journal:  Science       Date:  2001-07-26       Impact factor: 47.728

Review 6.  Zika Virus: New Clinical Syndromes and Its Emergence in the Western Hemisphere.

Authors:  Helen M Lazear; Michael S Diamond
Journal:  J Virol       Date:  2016-04-29       Impact factor: 5.103

7.  Interim Guidance for Interpretation of Zika Virus Antibody Test Results.

Authors:  Ingrid B Rabe; J Erin Staples; Julie Villanueva; Kimberly B Hummel; Jeffrey A Johnson; Laura Rose; Susan Hills; Annemarie Wasley; Marc Fischer; Ann M Powers
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2016-06-03       Impact factor: 17.586

Review 8.  Rapid Detection Strategies for the Global Threat of Zika Virus: Current State, New Hypotheses, and Limitations.

Authors:  Shruti Shukla; Sung-Yong Hong; Soo Hyun Chung; Myunghee Kim
Journal:  Front Microbiol       Date:  2016-10-24       Impact factor: 5.640

9.  Analytical and clinical performance of the CDC real time RT-PCR assay for detection and typing of dengue virus.

Authors:  Gilberto A Santiago; Edgardo Vergne; Yashira Quiles; Joan Cosme; Jesus Vazquez; Juan F Medina; Freddy Medina; Candimar Colón; Harold Margolis; Jorge L Muñoz-Jordán
Journal:  PLoS Negl Trop Dis       Date:  2013-07-11

10.  A Rapid Zika Diagnostic Assay to Measure Neutralizing Antibodies in Patients.

Authors:  Chao Shan; Xuping Xie; Ping Ren; Michael J Loeffelholz; Yujiao Yang; Andrea Furuya; Alan P Dupuis; Laura D Kramer; Susan J Wong; Pei-Yong Shi
Journal:  EBioMedicine       Date:  2017-03-04       Impact factor: 11.205

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  7 in total

Review 1.  Developments and Applications of Functional Protein Microarrays.

Authors:  Guan-Da Syu; Jessica Dunn; Heng Zhu
Journal:  Mol Cell Proteomics       Date:  2020-04-17       Impact factor: 5.911

Review 2.  Recent Advances in Plasma-Engineered Polymers for Biomarker-Based Viral Detection and Highly Multiplexed Analysis.

Authors:  Seyyed Mojtaba Mousavi; Seyyed Alireza Hashemi; Masoomeh Yari Kalashgrani; Ahmad Gholami; Navid Omidifar; Aziz Babapoor; Neralla Vijayakameswara Rao; Wei-Hung Chiang
Journal:  Biosensors (Basel)       Date:  2022-04-28

3.  Automatic Spot Identification Method for High Throughput Surface Plasmon Resonance Imaging Analysis.

Authors:  Zhiyou Wang; Xiaoqing Huang; Zhiqiang Cheng
Journal:  Biosensors (Basel)       Date:  2018-09-13

Review 4.  Lights and Shadows of TORCH Infection Proteomics.

Authors:  Janaina Macedo-da-Silva; Claudio Romero Farias Marinho; Giuseppe Palmisano; Livia Rosa-Fernandes
Journal:  Genes (Basel)       Date:  2020-08-05       Impact factor: 4.096

5.  Adenoviral vector type 26 encoding Zika virus (ZIKV) M-Env antigen induces humoral and cellular immune responses and protects mice and nonhuman primates against ZIKV challenge.

Authors:  Freek Cox; Leslie van der Fits; Peter Abbink; Rafael A Larocca; Ella van Huizen; Eirikur Saeland; Janneke Verhagen; Rebecca Peterson; Jeroen Tolboom; Baerbel Kaufmann; Hanneke Schuitemaker; Dan H Barouch; Roland Zahn
Journal:  PLoS One       Date:  2018-08-24       Impact factor: 3.240

Review 6.  Utility of Proteomics in Emerging and Re-Emerging Infectious Diseases Caused by RNA Viruses.

Authors:  Maike Sperk; Robert van Domselaar; Jimmy Esneider Rodriguez; Flora Mikaeloff; Beatriz Sá Vinhas; Elisa Saccon; Anders Sönnerborg; Kamal Singh; Soham Gupta; Ákos Végvári; Ujjwal Neogi
Journal:  J Proteome Res       Date:  2020-10-23       Impact factor: 4.466

7.  An Integrated Systems Biology Approach Identifies the Proteasome as A Critical Host Machinery for ZIKV and DENV Replication.

Authors:  Guang Song; Emily M Lee; Jianbo Pan; Miao Xu; Hee-Sool Rho; Yichen Cheng; Nadia Whitt; Shu Yang; Jennifer Kouznetsova; Carleen Klumpp-Thomas; Samuel G Michael; Cedric Moore; Ki-Jun Yoon; Kimberly M Christian; Anton Simeonov; Wenwei Huang; Menghang Xia; Ruili Huang; Madhu Lal-Nag; Hengli Tang; Wei Zheng; Jiang Qian; Hongjun Song; Guo-Li Ming; Heng Zhu
Journal:  Genomics Proteomics Bioinformatics       Date:  2021-02-19       Impact factor: 7.691

  7 in total

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