Andrew J Clulow1, Albin Parrow2, Adrian Hawley3, Jamal Khan1, Anna C Pham1, Per Larsson2, Christel A S Bergström2, Ben J Boyd1. 1. Drug Delivery, Disposition and Dynamics, Monash Institute of Pharmaceutical Sciences , 381 Royal Parade, Parkville, VIC 3052, Australia. 2. Department of Pharmacy, Uppsala Biomedical Centre, Uppsala University , P.O. Box 580, SE-751 23 Uppsala, Sweden. 3. Australian Synchrotron, ANSTO , 800 Blackburn Road, Clayton, VIC 3168, Australia.
Abstract
The absorption of hydrophobic drugs and nutrients from the intestine is principally determined by the amount that can be dissolved by the endogenous fluids present in the gut. Human intestinal fluids (HIFs) comprise a complex mixture of bile salts, phospholipids, steroids and glycerides that vary in composition in the fed and fasted state and between subjects. A number of simulated intestinal fluid (SIF) compositions have been developed to mimic fasted and fed state intestinal conditions and allow the in vitro determination of drug solubility as a proxy for the maximum dissolved concentration it is possible to reach. In particular these solvents are used during the development of lipophilic and poorly water-soluble drugs but questions remain around the differences that may arise from the source and methods of preparation of these fluids. In this work, a range of SIFs were studied using small-angle X-ray scattering (SAXS), cryogenic-transmission electron microscopy (cryo-TEM) and molecular dynamics (MD) simulations in order to analyze their structures. In-house prepared SIFs based on sodium taurodeoxycholate (NaTDC) and 1,2-dioleoyl-sn-glycero-3-phosphatidylcholine (DOPC) formed oblate ellipsoidal micelles irrespective of lipid concentration and preparation conditions. In contrast, commercially available SIFs based on sodium taurocholate and lecithin formed prolate ellipsoidal micelles in the fed state and vesicles in the fasted state. These structural variations are the likely reason for the dramatic differences sometimes observed in the solubility enhancements for hydrophobic drugs, nutrients and digestion products when using different SIFs. However, the structural homogeneity of the NaTDC/DOPC micelles makes them ideal candidates for standardizing SIF formulations as the structures of the solubilizing nanoaggregates therein are not sensitive to the preparation method.
The absorption of hydrophobic drugs and nutrients from the intestine is principally determined by the amount that can be dissolved by the endogenous fluids present in the gut. Human intestinal fluids (HIFs) comprise a complex mixture of bile salts, phospholipids, steroids and glycerides that vary in composition in the fed and fasted state and between subjects. A number of simulated intestinal fluid (SIF) compositions have been developed to mimic fasted and fed state intestinal conditions and allow the in vitro determination of drug solubility as a proxy for the maximum dissolved concentration it is possible to reach. In particular these solvents are used during the development of lipophilic and poorly water-soluble drugs but questions remain around the differences that may arise from the source and methods of preparation of these fluids. In this work, a range of SIFs were studied using small-angle X-ray scattering (SAXS), cryogenic-transmission electron microscopy (cryo-TEM) and molecular dynamics (MD) simulations in order to analyze their structures. In-house prepared SIFs based on sodium taurodeoxycholate (NaTDC) and 1,2-dioleoyl-sn-glycero-3-phosphatidylcholine (DOPC) formed oblate ellipsoidal micelles irrespective of lipid concentration and preparation conditions. In contrast, commercially available SIFs based on sodium taurocholate and lecithin formed prolate ellipsoidal micelles in the fed state and vesicles in the fasted state. These structural variations are the likely reason for the dramatic differences sometimes observed in the solubility enhancements for hydrophobic drugs, nutrients and digestion products when using different SIFs. However, the structural homogeneity of the NaTDC/DOPC micelles makes them ideal candidates for standardizing SIF formulations as the structures of the solubilizing nanoaggregates therein are not sensitive to the preparation method.
For permeable drugs
and nutrients, acceptable bioavailability relies
on reaching sufficient dissolved concentrations in the gastrointestinal
tract (GIT) to support absorption from the intestine. For hydrophobic
molecules dissolution is often the rate limiting step in this absorption
process due to their poor aqueous solubility.[1] However, human intestinal fluids (HIFs) have greater capacity than
water to solubilize hydrophobic molecules due to the presence of endogenous
surfactants. While the major component of HIFs is water, they also
include a variety of bile salts, phospholipids, and cholesterol making
them complex colloidal solutions. These solutions substantially increase
the dissolved concentration of hydrophobic drugs and nutrients in
the intestinal tract, and the structure of the resulting colloids
is therefore crucial to optimizing absorption and thereby bioavailability
of these bioactives.[2]Bile acids
are produced in the liver, stored in the gall bladder,
and released into the intestine with the bile. The majority of bile
acids present in HIFs are conjugated with either glycine or taurine,
which results in ionizedsalt forms at intestinal pH. Bile salts are
amphiphilic molecules in which the steroidal backbone comprises the
hydrophobic portion of the molecule. The polar portion is composed
of an ionizable carboxyl group (unconjugated or glycine-conjugated)
or a sulfonyl group (taurine-conjugated) and one or several hydroxyl
groups bound to the steroid rings depending on the type of bile acid.[3] The fused hydrophobic ring structure affords
the bile salts a more planar and rigid structure than classic amphiphiles,
which usually consist of a hydrophilic headgroup and a flexible hydrophobic
tail.[2] Bile salts form colloidal structures
that are only composed of the bile salts themselves, mixed aggregates
with phospholipids such as those present in the bile released into
the intestine and they may also incorporate themselves into bilayer
structures such as vesicles.[4,5] These lipidic nanoaggregates
can increase the solubility of hydrophobic compounds and thereby increase
the dissolved concentration of drugs and nutrients, which drives absorption
from the small intestine in particular. The individual critical micelle
concentrations (CMCs) of bile salts differ by type (conjugated, unconjugated,
mono/di/trihydroxy bile salt) and have been reported to be in the
range from 2.2 mM up to 20 mM depending on the bile salt studied.[6−8] Many bile salts are at or above their individual CMC under physiological
conditions and it has been reported that at high concentrations primary
bile salt micelles associate into larger secondary micelles via hydrogen
bonding.[3,9] However, the CMC may be different with many
bile salts present in the same mixture and thus in vivo their aggregates often comprise several different bile salts.In addition to bile salts and phospholipids, HIFs include cholesterol,
glycerides and free fatty acids.[10] The
concentrations of both bile salts and lipids increase after meal consumption,
often referred to as the fed state. There is also a greater variety
of lipids present in the fed state, partly due to lipids consumed
and as a result of their enzymatic degradation. As such, the overall
intra- and interindividual variability in fed state HIF composition
is greater than in the fasted state.[11] Because
of the complex content of HIFs, intestinal solubility of hydrophobic
drugs and nutrients can be quite different to their corresponding
aqueous solubility and this is especially true for highly lipophilic
compounds.[12] Many promising drug candidates
are highly lipophilic, and this has driven the use of simulated intestinal
fluids (SIFs) as a means to produce more physiologically relevant
preclinical dissolution studies. At the present time, a number of
different media are used as fasted and fed state simulated intestinal
fluids (FaSSIF and FeSSIF, respectively, available with various compositions)
to mimic the fluid of the human small intestine and media mimicking
fasted (human) colonic fluid have also been designed.[13,14] These media are highly simplified versions of small and large intestinal
fluids and typically consist of only one bile salt [commonly sodium
taurocholate (NaTC)] representing all bile salts and lecithin representing
all phospholipids. Biorelevant FaSSIF and FeSSIF media use the same NaTC/lecithin mixture at either low or high concentrations
to reflect the fasted and fed states, respectively, in the middle
to end of the duodenum after bile influx. More recently, the development
of FeSSIF V2 led to the addition of glyceryl monooleate
and sodium oleate to better reflect the complexity of the fed state
intestinal fluid after partial lipid digestion and transit down the
intestine to the mid to late jejunum.[15]Analysis of simple
bile
salt solutions, more sophisticated simulated intestinal media and
aspirated intestinal fluids by scattering and microscopic techniques
have revealed the formation of micelles with various shapes and sizes.[16−32] Small spherical or ellipsoidal micelles with low aggregation numbers
are formed from bile salts alone, whereas larger structures including
rods, discs, vesicles, and worms have been observed or proposed when
bile salts are mixed with phospholipids, cholesterol, and triglyceride
digestion products. The absolute concentration of bile salts and the
relative concentrations of other lipid components have been shown
to be key determinants of these structures. Furthermore, the presence
of larger structures has been found to be greater in the aspirated
HIF samples than in simulated media.[31] While
a number of experimental techniques have been used to characterize
the colloidal structures present in these different fluids, computational
methods have also been applied to better understand these structures.
Molecular dynamics (MD) simulations have been performed for pure bile
salts systems as well as bile salt/phospholipid mixtures.[33,34] In these studies smaller bile salt micelles and larger mixed micelles
of different form factors have been observed. In both the physical
measurements and the MD simulations, the ratio of bile salts to phospholipids
and the ionic strength have been observed to impact the form factor,
the aggregation number and type of the micelles.[33] However, the computational power to simulate physiologically
relevant concentrations is demanding due to the high water content
in the systems. This limitation makes it challenging to simulate larger
structures such as vesicles and large micelles due to the size of
the simulation box required to capture such structures. This increases
the simulation time exponentially and to make MD simulations feasible
the resolution must be decreased. Models in which a number of atoms
are represented by one particle rather than all explicit atoms are
typically used to address these issues, exemplified by using coarse
grained (CG) methods[35] and dissipative
particle dynamics (DPD)[36] rather than all
atom methods when simulating larger structures.It is clear
that the nanostructures formed in simulated intestinal
fluids influence the solubility of hydrophobic drugs and nutrients,
the extent to which is dependent on the lipid composition and the
resulting colloidal structures formed. Any differences between the
structures present in the solubilizing nanoaggregates within SIFs
therefore need to be well-defined to enable meaningful comparisons
to be drawn. Hence, in this study, seven different types of FaSSIF
and FeSSIF that are commonly used for drug solubilization studies
during the early drug development stage were characterized using small
angle X-ray scattering (SAXS), cryogenic transmission electron microscopy
(cryo-TEM) and dynamic light scattering (DLS) measurements. Commercially
available NaTC/lecithin-based media [FaSSIF and FeSSIF (original version) and FeSSIF V2 (version
2) from biorelevant.com] were compared with in-house prepared simple
sodium taurodeoxycholate (referred to as NaTDC in this work but has
also been called NaTDOC) micelles (BSMs) and NaTDC/1,2-dioleoyl-sn-glycero-3-phosphatidylcholine (DOPC) mixed micelles (MMs). The influence of lipid composition, lipid concentration,
buffer salts, and solution preparation on micelle structure were analyzed.
As a complementary approach, CG MD simulations were performed to simulate
and visualize the shape and size of these lipidic nanoaggregates.
Experimental
Methods
Composition and Preparation of Media
Media were prepared
with the compositions listed in Table .
Table 1
Bile Salt, Phospholipid/Lipid Compositions,
and Buffer Strength of the Media Studieda
For the Fasted and Fed MM systems the impact of the counterion
and the ionic
strength was explored by changing the buffer species or the concentration
of the counterion used.
For the Fasted and Fed MM systems the impact of the counterion
and the ionic
strength was explored by changing the buffer species or the concentration
of the counterion used.The FaSSIF, FeSSIF, and FeSSIF
V2 buffers and their associated SIFs were prepared according
to the manufacturer’s specifications.[37] Premeasured quantities of either FaSSIF/FeSSIF/FaSSGF powder (2
mg per mL of buffer for FaSSIF and 11 mg per mL of buffer
for FeSSIF solutions) or FeSSIF-V2 powder (10 mg per
mL of buffer for FeSSIF V2 solutions) were dissolved
to prepare the corresponding SIFs. Typically, 100 mL of buffer was
prepared at a time and 10–25 mL of solution was prepared for
each experiment. Separate solutions were prepared for SAXS measurements
and cryo-TEM measurements as these were performed at different times.According to the manufacturer’s material safety data sheets,
the FaSSIF/FeSSIF/FaSSGF and FeSSIF-V2 powders contain soy lecithin
(CAS number 8000-43-5). According to the product information for this
CAS number supplied by Sigma Aldrich, typical batches of soybeanphosphatidylcholine
(soy lecithin) have acyl chain contents of 64% linoleic (C18:2), 13%
palmitic (C16:0), 10% oleic (C18:1), 6% linolenic (C18:3), and 4%
stearic (C18:0) with other acyl chains being minor contributors (average
molecular weight = 776 g mol–1). In comparison,
DOPC is a highly purified phosphatidylcholine containing all oleic
(C18:1) acyl chains and has a molecular weight of 786.1 g mol–1.The first CMCs of sodium taurocholate and
sodium taurodeoxycholate
have been reported to be 3.1–4.0 and 0.8–1.0 mM, respectively,
at 20–30 °C within the counterion concentration range
used in the buffer solutions (150–300 mM).[4] Furthermore, it was also reported that the specific CMC
of sodium taurocholate decreases from 3.1–3.3 to 0.1–0.2
mM as the molar ratio with lecithin is increased from 1:0 to 0.6:1.0
(total molar CMC for NaTC/lecithin = 0.3–0.5 at this molar
ratio) in the same counterion concentration range at 20 °C. It
was therefore assumed that in all solutions the bile salt and bile
salt/phospholipid mixtures were above their respective CMCs.The in-house mixed micelle (MM) solutions were prepared
by three different methods to investigate to what extent their preparation
impacted the resulting solubilizing aggregates formed. First, MM solutions (either fed or fasted) were obtained by dissolving
the required amount of DOPC in a small amount of chloroform, which
was subsequently removed in vacuo to form a thin
phospholipid film. Sodium taurodeoxycholate was added (NaTDC:DOPC
ratio = 1:4, total lipid concentration = 6.25 mM in fasted state and
25 mM in the fed state) and the two lipids were then dissolved together
in the required volume of buffer solution under ultrasonication in
an ultrasonic bath. The bile salt micelle (BSM) solutions
were prepared by dissolving NaTDC alone in the required volume of
buffer under ultrasonication in an ultrasonic bath. Typically, 50
mL of solution was prepared for each experiment. Second, a freeze-dried Fasted MM sample was prepared by dissolving a Fasted
MM sample in 50 mM tris buffer, which was subsequently freeze-dried
and thereafter reconstituted in the same volume of Milli-Q water at
the time of the SAXS measurements. Third, a diluted Fasted MM sample was prepared by diluting a Fed MM solution with
50 mM Tris buffer such that the resulting solution had the same lipid
concentration as the other Fasted MM solutions.The buffer solutions listed in Table were prepared in Milli-Q water. FaSSIF, FeSSIF and FeSSIF V2 buffers were made
as recommended by the manufacturer and their compositions were: FaSSIF buffer–sodium chloride (105.9 mM), monobasic
sodium phosphate (28.4 mM), sodium hydroxide (8.7 mM) and pH adjusted
to 6.5; FeSSIF buffer–sodium chloride (203.2 mM),
acetic acid (144.1 mM), sodium hydroxide (101.0 mM) and pH adjusted
to 5.0; FeSSIF V2 buffer–sodium chloride (125.5
mM), maleic acid (55.0 mM), sodium hydroxide (81.7 mM) and pH adjusted
to 5.8. The remaining buffers (all with pH adjusted to pH 6.5) had
the following compositions: 50 mM Tris buffer–sodium
chloride (150 mM), trisma maleate (50 mM), sodium azide (6 mM); 2 mM Tris buffer–sodium chloride (150 mM), trisma maleate
(2 mM), sodium azide (6 mM); 50 mM PBS buffer–sodium
chloride (150 mM), monobasic sodium phosphate (20 mM), dibasic sodium
phosphate (30 mM), sodium azide (6 mM). All pH adjustments were performed
by adding small amounts of 0.2–2.0 M sodium hydroxide or hydrochloric
acid solutions to 95–98% of the final buffer volume before
diluting to the final volume with Milli-Q water.
Small Angle
X-ray Scattering (SAXS) Measurements
SAXS
measurements were performed at the Small and Wide Angle X-ray Scattering
(SAXS/WAXS) beamline of the Australian Synchrotron.[38] The autoloader sample environment developed at the Australian
Synchrotron was used for all measurements at the ambient temperature
of the SAXS/WAXS experimental hutch, which is typically around 300
K. Samples were centrifuged at 3000 rpm for 5 min before 100 μL
aliquots were loaded into 96-well plates covered with a silicone mat
to prevent evaporation. The samples were drawn one at a time into
a quartz capillary held stationary in the beam and up to 13 scattering
measurements were performed as the solution was drawn into and then
ejected from the capillary back into the sample well. The capillary
was then washed with water and 2% Helmanex detergent solution. The
capillary was filled with water and the background scattering from
the water-filled capillary was recorded to monitor capillary contamination
due to beam damage prior to the next sample being measured. This was
observed to be negligible for the SIFs measured under flow. Scattering
low Q values [Q = (4π/λ)sin(θ),
where λ is the X-ray wavelength and 2θ is the scattering
angle] were recorded at a sample–detector distance of 7159
mm with a photon energy of 12 keV (λ = 1.033 Å) and scattering
at higher Q values was recorded with a sample–detector
distance of either 1426 mm or 967 mm with photon energies of 12 and
11 keV (λ = 1.033 and 1.127 Å), respectively. 2D scattering
patterns were radially integrated into 1D scattering functions I(Q) using the in-house developed software
package ScatterBrain. The scattering function was
plotted on an absolute scale with units of cm–1 using
the scattering from water as standard. The low- and high-Q data were stitched together using the IRENA data analysis suite
(Version 2.61)[39] in the IgorPro 7 environment
and the data were analyzed using the SASView fitting software[40] (Version 4.0.1). The fitting parameters used
in the models are given in the Supporting Information and a full description of the models used is given in the SASView
documentation, which is free to download. A scattering length density
(SLD) of 9.47 × 10–6 Å–2 was used for the aqueous buffers in all models. To reduce the number
of free parameters in the models the source intensity [scale parameter representing I(Q = 0)]
was determined by Guinier fitting in the region QR ≤ 1.3 (plots not shown, fitting
results given in Table S2 in the Supporting Information) and used as the scale parameter in the corresponding
shape models. The uncertainties in the SAXS intensities were accounted
for in all models.
Dynamic Light Scattering (DLS) Measurements
DLS measurements
were performed on a Malvern Zetasizer Nano-ZS to determine the hydrodynamic
diameters and particle size distributions of the samples measured
using SAXS. Backscattered light from a 632.8 nm laser (4 mW output)
was measured at an angle of 173° at 298 K. The refractive indices
of the lipid aggregates and the aqueous dispersant were taken to be
1.46 and 1.33, respectively, with a dispersant viscosity of 0.8872
cP. The average and standard deviation of the micelle hydrodynamic
diameters are reported from the intensity and volume size distributions
determined by the inbuilt analysis software. Three independent sets
of 10–13 measurements were performed on each sample and the
peak particle sizes (d ± standard deviation)
determined from the intensity and volume distribution functions by
the instrument software are given in Table . Representative volume distributions from
one measurement on each sample is given in the Supporting Information, Figure S1.
Table 2
Particle
Size Analysis by DLS and
SAXS
medium
DLS sizea (volume dist. d, Å)
DLS sizea (intensity dist. d, Å)
Guinier Rgb (Å)
SAXS size (ellipsoid dc, Å)
SAXS size (sphere dd, Å)
Fasted BSM
37 ± 7
49 ± 9
18.8 ± 0.4
48.1 ± 0.3
48.5 ± 1.0
Fed BSM
40 ± 7
52 ± 9
19.1 ± 0.1
49.5 ± 0.1
49.3 ± 0.3
Fasted MM (50 mM tris)
47 ± 8
54 ± 9
26.0 ± 0.5
60.2 ± 0.9
67.1 ± 1.3
Fasted MM (2 mM Tris)
51 ± 7
58 ± 7
28.0 ± 0.5
62.8 ± 0.5
72.3 ± 1.3
Fasted MM (50 mM PBS)
48 ± 7
54 ± 7
27.3 ± 0.6
61.2 ± 0.7
70.5 ± 1.5
Fasted MM (freeze-dried)
48 ± 8
66 ± 14
26.2 ± 0.5
59.8 ± 0.7
67.6 ± 1.3
Fasted MM (diluted)
47 ± 9
59 ± 10
27.0 ± 0.5
61.8 ± 0.7
69.7 ± 1.3
Fed MM (50 mM Tris)
45 ± 8
60 ± 11
23.4 ± 0.1
59.1 ± 0.2
60.4 ± 0.3
Fed MM (2 mM Tris)
45 ± 6
51 ± 6
22.3 ± 0.1
58.6 ± 0.2
57.6 ± 0.3
Fed MM (50 mM PBS)
44 ± 8
56 ± 10
22.0 ± 0.1
57.7 ± 0.2
56.8 ± 0.3
FaSSIF (fresh)
414 ± 61
480 ± 66
e
351.4 ± 24.9
e
FaSSIF (2 d)
411 ± 61
477 ± 66
e
369.8 ± 26.5
e
FaSSIF (4 d)
424 ± 63
492 ± 67
f
f
f
FeSSIF (fresh)
48 ± 10
67 ± 14
26.4 ± 0.2
54.5 ± 2.4
68.2 ± 0.5
FeSSIF (2 d)
48 ± 9
66 ± 13
26.0 ± 0.1
54.3 ± 2.4
67.1 ± 0.3
FeSSIF (4 d)
50 ± 9
64 ± 11
f
f
f
FeSSIF V2 (fresh)
259 ± 53
357 ± 72
35.4 ± 0.5
65.4 ± 2.9
91.4 ± 1.3
FeSSIF V2 (2 d)
442 ± 82
564 ± 101
35.5 ± 0.5
65.4 ± 2.9
91.7 ± 1.3
FeSSIF V2 (4 d)
566 ± 106
713 ± 126
f
f
f
Average of three measurements on
each sample; individual values given in Table S1 (Supporting Information).
Determined using SASView software
for the Q-range in which QR ≤ 1.3. Fitting parameters given in
Table S2 (Supporting Information).
Quadratic mean diameters were determined
using the ellipsoid semiaxes from the core–shell ellipsoid
fitting parameters (supplied in the Supporting Information) using the equation where R is the modeled core radius, T is the modeled shell
thickness and Eq. and Ax. denote
equatorial and axial semiaxes,
respectively. Note that for the FaSSIF samples the equatorial
and axial dimensions are equal, and for the FaSSIF, FeSSIF, and FeSSIF V2 samples the uncertainty
in average d reflects the uncertainties in the fitting
parameters (see Supporting Information)
and the associated polydispersity of 15–20% in the core radii
used in the modeling. Uncertainties were propagated using the chain
rule.
Determined from the
modeled Guinier R using .
Guinier R was not determined as there was insufficient SAXS
data in the Q-range in which QR ≤ 1.3.
SAXS profile of sample was not recorded.
Average of three measurements on
each sample; individual values given in Table S1 (Supporting Information).Determined using SASView software
for the Q-range in which QR ≤ 1.3. Fitting parameters given in
Table S2 (Supporting Information).Quadratic mean diameters were determined
using the ellipsoid semiaxes from the core–shell ellipsoid
fitting parameters (supplied in the Supporting Information) using the equation where R is the modeled core radius, T is the modeled shell
thickness and Eq. and Ax. denote
equatorial and axial semiaxes,
respectively. Note that for the FaSSIF samples the equatorial
and axial dimensions are equal, and for the FaSSIF, FeSSIF, and FeSSIF V2 samples the uncertainty
in average d reflects the uncertainties in the fitting
parameters (see Supporting Information)
and the associated polydispersity of 15–20% in the core radii
used in the modeling. Uncertainties were propagated using the chain
rule.Determined from the
modeled Guinier R using .Guinier R was not determined as there was insufficient SAXS
data in the Q-range in which QR ≤ 1.3.SAXS profile of sample was not recorded.
Cryogenic Transmission Electron Microscopy
(cryo-TEM) Measurements
A laboratory-built humidity-controlled
vitrification system was
used to prepare the samples for cryo-TEM measurements. Humidity was
kept close to 80% for all experiments and the ambient temperature
was 295 K. Aliquots (3 μL) of each sample were pipetted onto
a 300-mesh copper grid coated with lacey Formvar over a perforated
carbon support (ProSciTech, Thurwingowa, Australia GSCu300FL-50C)
that were glow discharged in nitrogen to render them hydrophilic.
After ∼10 s adsorption time the grid was blotted manually with
Whatman 541 filter paper for ∼2 s. Blotting time was optimized
for each sample. The grid was then plunged into liquid ethane cooled
by liquid nitrogen. Frozen grids were stored in liquid nitrogen until
the cryo-TEM measurements were performed. The samples were examined
using a Gatan 626 cryoholder (Gatan, Pleasanton, CA) and Tecnai 12
Transmission Electron Microscope (FEI, Eindhoven, The Netherlands)
at an operating voltage of 120 kV. At all times, low dose procedures
were followed using an electron dose of 8–10 electrons Å–2. Images were recorded using a Megaview III CCD camera
and AnalySIS camera control software (Olympus). Consistent images
were observed in at least three independent grid squares.
Molecular Dynamics
(MD) simulations
Coarse grained
MD simulations were performed on the Fasted BSM, Fed BSM, Fasted MM, Fed MM, FaSSIF, and FeSSIF mixtures. To be able to achieve
reasonable simulation times while keeping a high water content for
each solution, FeSSIF V2 was excluded from the simulations
due to the more complex nature of this mixture. Each system was constructed
according to the concentrations of lipids in Table and solvated with polarizable Martini water.
Parameterizations of taurodeoxycholate and taurocholate were based
on the Martini cholesterol topology: exchanging one SC3 and one SC1
particle for two SP1 particles (taurocholate); one SC3 particle for
one SP1 particle (taurodeoxycholate) and also adding a Qa particle
with a −1.0 charge to represent the taurine group. These topologies
were subjected to basic validation (distribution of intramolecular
angles and dihedrals as well as density) against previously published
all-atom data.[41] Phospholipids used the
Martini force fields available on the Martini Web site for 1,2-dioleoyl-sn-glycero-3-phosphatidylcholine (DOPC) in the MM systems and 1,2-dilinoleoyl-sn-glycero-3-phosphatidylcholine
(DLiPC) to represent lecithin in the FaSSIF and FeSSIF mixtures. A cubic box with side lengths of 40 nm was
used for all systems with periodic boundary conditions applied. The
molecules were initially randomly distributed in the simulation box
by the software Packmol.[42] Gromacs 5.1.2
or Gromacs 2016 software was used for all simulations.[43] All simulations were performed with the v-rescale
thermostat[44] set to 310 K and the Berendsen
isotropic barostat set to 1 bar. Electrostatics and van der Waals
interactions were in accordance with the recommendations for Gromacs
version 5 together with polarizable water.Prior to production
runs each system was equilibrated. Initial energy minimization used
the steepest descent algorithm for a minimum of 10 000 steps,
followed by 5 short (30 000 steps) equilibration runs while
increasing the time step from 1 to 5 fs and a longer equilibration
run for 500 000 steps with a 20 fs time step. Additional equilibration
steps at 20 fs were applied if equilibration was not reached. Production
runs were performed for 2 μs with a 20 fs time step. Micelles
were detected with an in-house python script using single-linkage,
which assigned a molecule to a cluster when its distance to any element
of the cluster was less than 5 nm. Micelle sizes were determined by
gmx mindist as the maximum distance within each cluster. Shape factors
were calculated for each cluster from the radius of gyration tensor
for that cluster as the ratio of the largest and the smallest eigenvalue
after diagonalization. Visualization and rendering of molecules were
performed with VMD.[45]
Results and Discussion
Structural
Analysis of the Sodium Taurodeoxycholate Bile Salt
Micelle (BSM) and NaTDC/DOPC Mixed Micelle (MM) Solutions
Initially the structures of NaTDCBSMs and NaTDC/DOPCMMs were compared. The X-ray scattering
profiles for the BSMs are shown in Figure a. Spherical models did not provide good
fits to these scattering profiles but ellipsoidal fits did. The Fasted BSM profile could be fitted well as a collection of
oblate biaxial ellipsoids without requiring polydispersity in the
fitting model. The Fed BSM profile was better fitted
as an oblate triaxial ellipsoid but the decrease in the χ2 value for this fitting model (used as a measure of goodness
of fit) was small (a factor of 1.5) upon addition of the third semiaxis
and so the biaxial model shown in Figure a) was used.
Figure 1
(a) Scattering profiles
of fed and fasted bile salt (NaTDC) micelles
(BSM). Individual colored points represent the recorded
data and the solid black lines indicate fit curves to biaxial ellipsoid
models. The CMC of NaTDC has been reported to be 0.8–1.0 mM
in the temperature and salt concentration ranges used in the experiments.[4] (b) Scattering profiles of fed and fasted bile
salt micelles (BSM) and NaTDC/DOPC mixed micelles (MM) normalized by dividing by the molar concentration of lipids.
Individual colored points represent the recorded data and the dashed
black lines indicate the BSM curves divided by 10.
(a) Scattering profiles
of fed and fasted bile salt (NaTDC) micelles
(BSM). Individual colored points represent the recorded
data and the solid black lines indicate fit curves to biaxial ellipsoid
models. The CMC of NaTDC has been reported to be 0.8–1.0 mM
in the temperature and salt concentration ranges used in the experiments.[4] (b) Scattering profiles of fed and fasted bile
salt micelles (BSM) and NaTDC/DOPC mixed micelles (MM) normalized by dividing by the molar concentration of lipids.
Individual colored points represent the recorded data and the dashed
black lines indicate the BSM curves divided by 10.The semiaxes of the Fasted
BSMs were found to be 13.7
± 0.5 (axial) and 27.8 ± 0.3 Å (equatorial) and those
of the Fed BSMs were 15.3 ± 0.1 (axial) and 27.8
± 0.1 Å (equatorial). Table summarizes the particle size analyses performed using
DLS and SAXS, comparing the particle diameters determined by DLS with
those estimated for spheres and ellipsoids from the SAXS data analysis.
The Fasted and Fed BSM particle diameters
determined from the SAXS analysis were in good agreement with those
determined from the DLS intensity distributions. Guinier analysis
gave radii of gyration on the order of 19 Å for the BSMs and it is noteworthy that the radii of the BSMs in
H2O are smaller than those of 62 ± 10 Å determined
by Guinier analysis of a small angle neutron scattering profile of
5 mM NaTDC (analogous to Fasted BSM) in D2O.[21] Strong intermicellar interactions
were also observed in the earlier neutron scattering study at NaTDC
concentrations >10 mM but they were not observed in this work.
This
suggests that NaTDC has different micellar aggregation properties
in D2O and H2O, likely caused by changes in
hydrogen bonding with the solvent upon deuteration. As such, it was
found that the size of the NaTDCbile salt micelles did not change
significantly within the concentration range studied. The scattering
length densities (SLDs) of the micelles were modeled to be 9.91–9.94
× 10–6 Å–2, indicating
that the packing density of the taurodeoxycholate molecules in the
micelles was also similar at both concentrations.The scattering
profiles of the BSM solutions are compared
with those of the corresponding MM solutions (containing
0.25 mol equiv of DOPC) in Figure b (these scattering profiles have been normalized to
the total lipid concentration in the solution for comparison). The MM profiles are substantially different to those of the BSMs, showing a pronounced side maximum around Q = 0.19 Å–1 before a tail off to background
at higher Q than the corresponding BSMs. This indicated a core–shell type MM as has
been proposed previously to interpret the scattering profiles of bile
salt/egg yolk lecithin mixed micelles (bile salt:phospholipid >
2:1).[17] The coexistence of simple BSMs
and MMs in such solutions has previously been proposed,
largely predicated on the results of dynamic light scattering measurements
initially reported by Mazer et al.[18,46−48] The invariance in the BSM scattering profiles observed
across the concentration range measured suggests that at most a tenth
of the scattering intensity from the MM solutions are
simple bile salt micelles. The BSM SAXS profiles divided
by 10 are shown in Figure b, and this indicates that if more than 10% of the NaTDC molecules
were aggregated into BSMs in the MM solutions
then higher scattering intensities at Q = 0.12 Å–1 would be observed. Furthermore, attempts to model
the MM solution profiles as a mixture of simple bile
salt micelles and mixed micelles using the fitting parameters from
the BSM models resulted in the fitting software making
the scattering intensity of the BSM component negligible,
effectively removing the simple NaTDC micelles from the population.
As such, the MM solutions were fitted as elliptical core–shell
micelles (Figure )
in the absence of simple BSMs.
Figure 2
(a) Scattering profiles
of fed and fasted NaTDC/DOPC mixed micelles
(MM) prepared under a variety of conditions. Individual
SAXS profiles are offset in intensity for clarity in the direction
indicated by the black arrows. Before offsetting, the five Fasted
MM profiles overlapped in intensity, as did the three Fed MM profiles. Individual colored points represent recorded
data and the black lines represent fit curves. (b) Core–shell
ellipsoid fitting models used to fit the data. The colored lines indicate
the core and shell boundaries of the MMs with the colors
matching the curves in part a, the dotted gray lines indicate the
outer radii of the BSMs (modeling in Figure ) and the dashed black line
along x = 0 indicates the principal rotation axis
of the ellipsoids. The numbers in the core, shell and solvent portions
of the graph indicate the common SLDs used for that portion of the
model in units of 10–6 Å–2.
(a) Scattering profiles
of fed and fasted NaTDC/DOPC mixed micelles
(MM) prepared under a variety of conditions. Individual
SAXS profiles are offset in intensity for clarity in the direction
indicated by the black arrows. Before offsetting, the five Fasted
MM profiles overlapped in intensity, as did the three Fed MM profiles. Individual colored points represent recorded
data and the black lines represent fit curves. (b) Core–shell
ellipsoid fitting models used to fit the data. The colored lines indicate
the core and shell boundaries of the MMs with the colors
matching the curves in part a, the dotted gray lines indicate the
outer radii of the BSMs (modeling in Figure ) and the dashed black line
along x = 0 indicates the principal rotation axis
of the ellipsoids. The numbers in the core, shell and solvent portions
of the graph indicate the common SLDs used for that portion of the
model in units of 10–6 Å–2.The scattering profiles recorded
for the Fasted MM and Fed MM comprising
sodium taurodeoxycholate and
DOPC [Figure a] were
near-identical, irrespective of the buffer solution or the method
used for their preparation. Importantly, this showed that both diluting
a Fed MM solution to make a Fasted MM solution
and reconstituting a freeze-dried Fasted MM solution
(complete with buffer salts) yielded solutions analogous to Fasted MM freshly prepared in buffer. As such, large stocks
of taurodeoxycholate/DOPC mixed micelles could be prepared from a
fed micelle stock solution and freeze-dried for long storage periods
or transport, ready to be reconstituted when required. Furthermore,
the constancy of micelle structure in these systems makes them a useful
standard preparation for testing the influence of interactions with
additional lipids and surfactants on micelle structure as the initial
structure is well-defined and insensitive to total NaTDC/DOPC and
buffer concentrations within the ranges studied.The SAXS profiles
of the MM solutions were modeled
as oblate core–shell ellipsoids, the structures of which are
compared to the modeled structures for the corresponding BSMs in Figure b. The
“core_shell_ellipsoid” model was used to fit the scattering
profiles, which determines the equatorial core radius and shell thickness
along with axial/equatorial ratios (x) for these
values. In the case of the MM solutions, the x values were all around 0.625 (again making the micelles
oblate) and these parameters were then fixed to this value in the
modeling. This indicated that the micelles were similar to the BSMs and that the addition of 0.25 mol equiv of DOPC in the MM solutions swells the bile salt micelles without changing
their overall shape significantly. The background intensities in the
SAXS models were fixed to the lowest observed intensity value. This
left four free fitting parameters: the equatorial core radius and
shell thickness; the core SLD and the shell SLD. The modeled SLDs
for the cores and shells of the mixed micelles were similar being
7.34 ± 0.11 (average ± standard deviation of the eight fitted
values generated by SASView) and 9.88 ± 0.03 × 10–6 Å–2, respectively. It would be expected that
the low SLD cores of the MMs are occupied primarily by
segments of the oleyl chains of the DOPC molecules. The shell, which
has a modeled SLD just below those modeled for the BSMs (Figure ), is mainly
composed of taurodeoxycholate mixed with the phosphatidylcholine headgroups
of DOPC and the carboxyl termini of the oleyl chains.Analysis
of the SAXS data by Fourier inversion (Figure ) to generate the corresponding
pair distance distribution [p(r)]
functions revealed the presence of weak interactions between the nanoaggregates
of the Fed MMs, which were absent in the Fasted
MM scattering profiles due to the lower lipid concentration.
This finding is consistent with the previously reported SAXS analysis
of bile salt/lecithin micelles.[17] The resulting
weak perturbations to the core–shell form factors of the Fed MMs were accounted for by incorporating a hard-sphere
structure factor into the model with a micelle volume fraction of
0.015, which is close to the weight fraction of lipid in the solution
(0.013). From the p(r) functions,
it could be seen that the side maximum in the SAXS profiles originated
from spacial correlations between the higher SLD DOPC headgroups/NaTDC
on either side of the low SLD MM core leading to the
second maximum in the p(r) function.
The side maxima at Q = 0.19 Å–1 correlate with the position of the second maxima in the corresponding
characteristic distance probability functions [g(r) = p(r)/4πr2] at 33 Å through Bragg’s law (r = 2π/Q). The subtle changes in
the MM scattering profiles resulted in small variations
in the equatorial radii and shell thicknesses (Figure b). On average the Fed MMs appeared
to be slightly smaller than the Fasted MMs and the overall
average values of the equatorial core radius and shell thickness were
10.8 ± 0.3 and 22.9 ± 0.8 Å, respectively. As with
the BSMs, the hydrodynamic diameters of the MMs determined from the DLS intensity distributions were analogous
to those produced by the SAXS analysis (Table ). The structures of the solubilizing micelles
in NaTDC/DOPC MM solutions therefore appeared to be virtually
independent of feeding state, buffer salts/concentration and preparation
method making them strong candidates for a standard preparation to
unify assessment of the solubility of hydrophobic compounds in simulated
intestinal media and to assess the corresponding effects on micelle
structure.
Figure 3
(a) Pair distance distribution function [p(r)] fits and (b) corresponding normalized p(r) functions and characteristic distance probability
functions [g(r) = p(r)/4πr2] for Fed and Fasted MMs. The particles have similar p(r) functions at low r indicating similar particle shapes
but at higher r the negative values of p(r) beyond the particle radius for the Fed
MMs indicate interparticle interactions.
(a) Pair distance distribution function [p(r)] fits and (b) corresponding normalized p(r) functions and characteristic distance probability
functions [g(r) = p(r)/4πr2] for Fed and Fasted MMs. The particles have similar p(r) functions at low r indicating similar particle shapes
but at higher r the negative values of p(r) beyond the particle radius for the Fed
MMs indicate interparticle interactions.
Structural Analysis of the Sodium Taurocholate/Lecithin-based FaSSIF, FeSSIF and FeSSIF V2 Solutions
In contrast to the homogeneity of the taurodeoxycholate/DOPC micelles,
the commercially available FaSSIF, FeSSIF and FeSSIF V2 all had different scattering profiles.
Freshly prepared samples were measured (∼2–6 h after
preparation) and separately prepared samples were measured after 2
days as this is the recommended use-by time of the manufacturer. It
has recently been reported that FaSSIF particles are
micelles with diameters of around 40 nm based on a variety of electron
microscopy experiments.[31] However, the
scattering profiles for fresh and 2-day old FaSSIF solutions
(Figure a) were inconsistent
with simple core–shell micelle structures. The high-Q correlation peak around Q = 0.15 Å–1 and the manifestation of the global particle scattering
feature at much lower Q was in fact consistent with
large vesicular structures.
Figure 4
(a) Scattering profiles recorded for freshly
prepared and 2-day
old FaSSIF media. Individual colored points represent
the recorded data and the solid black lines indicate fit curves. The
Fresh FaSSIF profile and fit have been offset by an order
of magnitude for clarity. (b) SLD versus radius plots used to fit
the data in part a. The colored lines represent the changes in SLD
as a function of radius from the center of the particles and the dashed
black lines indicate the Gaussian distribution (polydispersity) in
core radius used in the modeling.
(a) Scattering profiles recorded for freshly
prepared and 2-day
old FaSSIF media. Individual colored points represent
the recorded data and the solid black lines indicate fit curves. The
Fresh FaSSIF profile and fit have been offset by an order
of magnitude for clarity. (b) SLD versus radius plots used to fit
the data in part a. The colored lines represent the changes in SLD
as a function of radius from the center of the particles and the dashed
black lines indicate the Gaussian distribution (polydispersity) in
core radius used in the modeling.The FaSSIF scattering profiles were modeled
using
the ‘core_multi_shell’ model with polydispersity in
the core radius and the models suggested the presence of vesicular
structures with ∼40 Å thick bilayer membranes (Figure b). The polydispersities
in the core radii were 0.2 (standard deviation = 20% of radius value)
and the bilayer structure could be modeled with the same SLDs and
similar thicknesses for the three layers of the bilayer membrane in
both fits. The primary difference between the fresh and 2-day old
fits was in the average core radius, which was slightly larger in
the 2-day old fitting model, indicating possible aggregation of the
older FaSSIF particles into larger vesicles. However,
given the associated polydispersity in core radius this could simply
be due to sample-to-sample variation. The average hydrodynamic diameters
determined by DLS (Table ) had consistently large standard deviations and the particle
sizes derived from the volume distributions were within error of the
average vesicle diameters determined from the SAXS modeling of 351
± 25 and 370 ± 27 Å for the fresh and 2-day old samples,
respectively. Given the polydispersity in core radius it is likely
that the intensity distribution is weighted too heavily in favor of
the larger vesicles, with diameters on the order of 500–600
Å (Figure b).The outer headgroup regions of the bilayer membranes had an SLD
analogous to that of the shells of the MMs of 9.99 ×
10–6 Å–2 and were slightly
thinner (∼11 Å) than the inner headgroup regions, which
had an SLD of 9.69 × 10–6 Å–2 and thicknesses of 11–14 Å. We attribute this to an
accumulation of the high SLD taurocholate molecules at the vesicle/bulk
solution interface. While the modeled diameters from the SAXS data
were consistent with the diameters observed in previously reported
electron microscopy experiments,[31] the
interpretation of the SAXS data as vesicles and not fully dense micelles
was not. The vesicular nature of the lipid particles in the FaSSIF solutions was confirmed by the cryo-TEM images that
are shown in Figure , parts a and b. The particles
were observed to be vesicles with diameters of 30–50 nm and
bilayers around 5 nm thick, consistent with the SAXS analysis of this
work.
Figure 5
Cryo-TEM images of frozen samples of (a, b) FaSSIF solution
showing vesicular particles with diameters on the order
of 40 nm and (c, d) FeSSIF solution showing smaller ellipsoidal
mixed micelles highlighted in white boxes. Images of the particles
shown were observed in at least three independent grid squares.
Cryo-TEM images of frozen samples of (a, b) FaSSIF solution
showing vesicular particles with diameters on the order
of 40 nm and (c, d) FeSSIF solution showing smaller ellipsoidal
mixed micelles highlighted in white boxes. Images of the particles
shown were observed in at least three independent grid squares.Finally, the lipid structures
formed in FeSSIF and FeSSIF V2 solutions
(Figure ) were compared
with those of the Fed MMs discussed previously. The scattering
profiles of the FeSSIF and FeSSIF V2 solutions
bore a closer resemblance to
those of the MMs in Figure and only minor changes in the scattering
profiles were observed above Q = 0.01 Å–1 over the two day aging period. The scattering profiles
were therefore modeled in a similar manner to the Fed MMs using the ‘core_shell_ellipsoid’ model. In contrast
to the MMs containing taurodeoxycholate, the optimized
ellipsoid models for the FeSSIFs containing taurocholate
were prolate (Figure b) and polydispersity was required in the core radii (polydispersity
factor = 0.15 for both FeSSIF and FeSSIF V2) to model the SAXS profiles, which was propagated to the axial core
radius through the scaling factor xCore in the model. These findings are consistent with previous reports
on the modeling of neutron and light scattering profiles of glycine-
and taurine-conjugated bile salt/lecithin micelles, which indicated
rod/worm-like micelles at high lipid concentrations (as in the FeSSIFs), which transformed into vesicles as the lipid concentration
was lowered (as observed with FaSSIF).[19,20,24,26,28] Furthermore, small ellipsoidal micelles were observed
in cryo-TEM images of FeSSIF (Figure , parts c and d), confirming the highly concentration-dependent
nature of the structures formed by the FaSSIF/FeSSIF/FaSSGF powders
supplied by biorelevant.com. The substitution of lecithin in FeSSIF by additional glyceryl oleate and sodium oleate (to
mimic the products of lipid digestion) in FeSSIF V2 leads
to swelling of the micelle core region primarily along the principal
rotation axis, with only minor swelling of the shell region observed.
This indicates that the FeSSIF micelles would become
more rod-like upon absorption of the digestion products of (oleate-based)
triglycerides. In contrast to the Fed MM solutions (Figure ), no interparticle
interaction effects were observed in the p(r) functions determined by Fourier inversion analysis (Figure , parts c and d)
of the FeSSIF and FeSSIF V2 scattering profiles,
and therefore, no structure factors were used in their modeling. The
second maxima in the g(r) functions
indicating the average correlation distance between the high SLD shell
regions on either side of the cores at 36 Å (FeSSIF) and 44 Å (FeSSIF V2) were consistent with the
NaTC/lecithin-based micelle cores being larger on average than the
NaTDC/DOPC micelle cores. These distances also correlated with the
positions of the corresponding side maxima at Q =
0.17 and 0.14 Å–1 for FeSSIF and FeSSIF V2, respectively. The particle diameters determined
from the FeSSIF SAXS profiles for both spheres and ellipsoids
were within error of the corresponding hydrodynamic diameters determined
from the DLS intensity distributions (Table ). The average ellipsoidal FeSSIF particle diameter was also within error of the corresponding hydrodynamic
diameter from the DLS volume distributions. In contrast, the peaks
observed in the DLS size distributions of the FeSSIF V2 solutions had an average diameter much larger than the micelles
modeled from the SAXS profiles and this was attributed to aggregating
lipids. The influence of these larger particles was also observed
as an upturn in the X-ray scattering intensity at Q < 0.01 Å–1, the average size of the aggregates
grew larger over 4 days as successive DLS measurements were performed
(Table ) and during
this time the opalescence of the FeSSIF V2 solutions
became more prominent. This shows that of the three SIFs prepared FeSSIF V2 was unstable with respect to aggregation,
while FaSSIF and FeSSIF were found to be
stable with the same scattering profiles after 2 days and the same
DLS diameters after 4 days. It may therefore be imperative to take
this slow aggregation effect into account when using FeSSIF
V2 as a simulated medium for intestinal processes.
Figure 6
(a) Scattering
profiles for fresh and 2-day old FeSSIF and FeSSIF
V2 solutions with the profile of Fed
MM in 50 mM Tris buffer included for comparison. (b) Core–shell
ellipsoidal fitting models used to fit the SAXS data. (c) p(r) fits and (d) p(r) and g(r) functions
for the fresh FeSSIF and FeSSIF V2 media.
In parts a and c, individual colored points represent the recorded
data and the solid black lines indicate fit curves. The colored lines
indicate the core and shell boundaries with the colors matching the
curves in part a. The dashed line along x = 0 indicates
the principal rotation axis of the ellipsoid and the shell region
of the Fed MM in 50 mM Tris model (gray) has been shaded
to aid comparison.
(a) Scattering
profiles for fresh and 2-day old FeSSIF and FeSSIF
V2 solutions with the profile of Fed
MM in 50 mM Tris buffer included for comparison. (b) Core–shell
ellipsoidal fitting models used to fit the SAXS data. (c) p(r) fits and (d) p(r) and g(r) functions
for the fresh FeSSIF and FeSSIF V2 media.
In parts a and c, individual colored points represent the recorded
data and the solid black lines indicate fit curves. The colored lines
indicate the core and shell boundaries with the colors matching the
curves in part a. The dashed line along x = 0 indicates
the principal rotation axis of the ellipsoid and the shell region
of the Fed MM in 50 mM Tris model (gray) has been shaded
to aid comparison.
Molecular Dynamics Simulations
of Micelle Shape and Size
On a qualitative level, the nanoaggregate
structures provided by
the MD simulations (Figure ) were in reasonable agreement with the SAXS analysis presented
and this supported the use of the Martini force fields applied in
the MD simulations. Simulation of the micelles formed in the Fasted and Fed BSMs, MMs, and FeSSIF showed that most micelles had some ellipsoidal character
with shape factors from 1.1 to 3.5 determined from the maximum and
minimum radii of gyration tensors with most values lying between 1.2
and 2.0 (Figure a).
The corresponding shape factors determined from the axial and equatorial
radii of the ellipsoidal SAXS models varied from 1.5 to 2.0 [Fed/Fasted BSMs = 1.8–2.0, Fed/Fasted MMs = 1.6 and FeSSIF = 1.5], suggesting that the computational
models slightly underestimated the ellipticity of the micelles formed.
That being said, for each system except for the Fasted BSMs the shape factor determined from the SAXS data analysis lay within
the range of individual shape factors determined by the MD simulations.
Individual examination of the clusters in the models revealed a mixture
of oblate and prolate ellipsoids in every system with a stronger tendency
to form prolate ellipsoids, in contrast to the SAXS measurements that
revealed oblate ellipsoids in the NaTDC/DOPC solutions. The tendency
for spherical and prolate bile salt micelles to form in coarse grained
(CG) MD simulations that neglect hydrogen bonding has been reported
previously.[49] However, it has also been
reported that intermolecular hydrogen bonding is a primary driver
of the size, structure and dynamics of the micelles formed in MD simulations.[50] This report used united atom simulation methods
rather than CG and found that on average the micelles formed from
six different bile salts with a variety of steroid hydroxylation patterns
and glycine/taurine conjugations were oblate, as observed in the SAXS
analysis of NaTDCBSMs. It was therefore concluded that
the removal of explicit hydrogen bonding capacity by using the CG
model described in this work has weakened the ability of the MD simulations
to distinguish the preference of the bile salt/phospholipid aggregates
to assume oblate or prolate ellipsoidal forms.
Figure 7
Snapshots of two micelles
from each of the following simulated
systems: (a) Fasted BSM, (b) Fed BSM, (c) Fasted MM, (d) Fed MM, and (e) FeSSIF. In each subfigure two micelles are viewed perpendicular to the
principle rotation axis (upper images) and along the principle rotation
axis (lower images) and the arrows indicate the 90° rotations.
Bile salts are dark gray, phospholipid tails are green and the polar
head groups are red and yellow. For the MMs an accumulation
of bile salts can be seen around the micelle surfaces with the phospholipids
having their head groups pointing outward in all directions and their
hydrophobic tails more densely packed in the inner core. The corresponding BSMs are smaller and more prolate or rod-like.
Figure 8
(a) Shape factors of the micelles modeled in the MD simulations.
The shape factor was determined from the MD simulations as the ratios
of the largest and smallest radius of gyration tensors as described
in the experimental methods section, where
a sphere will have a shape factor of 1.0. The individual colored crosses
indicate the shape factors of individual clusters and the offset colored
circular point with error bars represents the average shape factor
and standard deviation for the distribution. Shape factors from the
SAXS analysis are shown as a single black circle for comparison and
were determined by dividing the larger of the axial/equatorial radii
by the smaller. All micellar systems showed some degree of ellipticity
in both the MD simulations and the SAXS analysis. (b) Micelle sizes
determined by the MD simulations, defined as number of CG beads. The
five largest clusters (ID 1–5 from largest to smallest) from
each system are compared in terms of how many CG beads they contain.
Micelle IDs are on the x-axis with the number of
CG beads on the y-axis.
Snapshots of two micelles
from each of the following simulated
systems: (a) Fasted BSM, (b) Fed BSM, (c) Fasted MM, (d) Fed MM, and (e) FeSSIF. In each subfigure two micelles are viewed perpendicular to the
principle rotation axis (upper images) and along the principle rotation
axis (lower images) and the arrows indicate the 90° rotations.
Bile salts are dark gray, phospholipid tails are green and the polar
head groups are red and yellow. For the MMs an accumulation
of bile salts can be seen around the micelle surfaces with the phospholipids
having their head groups pointing outward in all directions and their
hydrophobic tails more densely packed in the inner core. The corresponding BSMs are smaller and more prolate or rod-like.(a) Shape factors of the micelles modeled in the MD simulations.
The shape factor was determined from the MD simulations as the ratios
of the largest and smallest radius of gyration tensors as described
in the experimental methods section, where
a sphere will have a shape factor of 1.0. The individual colored crosses
indicate the shape factors of individual clusters and the offset colored
circular point with error bars represents the average shape factor
and standard deviation for the distribution. Shape factors from the
SAXS analysis are shown as a single black circle for comparison and
were determined by dividing the larger of the axial/equatorial radii
by the smaller. All micellar systems showed some degree of ellipticity
in both the MD simulations and the SAXS analysis. (b) Micelle sizes
determined by the MD simulations, defined as number of CG beads. The
five largest clusters (ID 1–5 from largest to smallest) from
each system are compared in terms of how many CG beads they contain.
Micelle IDs are on the x-axis with the number of
CG beads on the y-axis.Coexisting pure BSMs without incorporated phospholipid
were absent in the simulated bile salt/phospholipid mixed micelle
solutions (MM and FeSSIF), again correlating
well with the experimental observations from the analysis of the SAXS
intensities from these systems. On a molecular level, the MD simulations
of the MMs revealed alkyl chain-rich micelle cores surrounded
by shells rich in bile salts (Figure ). This correlated well with the observed swelling
effect of adding 25 mol % phospholipid to the BSM solutions
to form MM solutions in the SAXS analysis. Furthermore,
the distances between the outer phospholipid headgroups on either
side of the hydrophobic cores (red/yellow in Figure ) correlate well with the second maxima in
the g(r) functions of the MM (Figure b) and FeSSIF (Figure d) of around 3–4 nm, which are associated with
SLD-correlation between high SLD shell regions on either side of the
core–shell particles.The vesicular structures of the FaSSIF system, with average
diameters measured experimentally to be around 38 nm, were unresolvable
in the MD simulations due to the relatively small side length of the
simulation box (40 nm). For such large structures to be simulated
a much larger simulation box would be required to maintain a constant
lipid concentration and to keep the periodic boundary conditions from
having an effect on the structure of the aggregates. The core time
required to simulate 2 μs of equilibration with the current
simulation box size was already high (40,000 CPU-hours) for the particular
system used and it was therefore not possible to accurately model
the large vesicular FaSSIF structures within a reasonable
time frame despite the use of coarse grained molecules.A clear
difference was observed in the bile salt/phospholipid composition
of the MM and FeSSIF micelles. The Fasted and Fed MMs had micelles with an average
ratio of approximately four TDC molecules to one phospholipid, whereas
the FeSSIF micelles had a ratio of two TC molecules to
one phospholipid. This correlates well with the larger core and thinner
shell regions observed in the SAXS modeling of the FeSSIF micelles when compared to the Fed MMs. Furthermore,
this indicates that the bile salt and phospholipid molecules distribute
themselves evenly throughout the NaTDC/DOPCMMs, whereas
the more hydrophilic NaTC molecules in the FeSSIF solutions
favor the shell region of the micelles leading to lecithin-rich micelles
relative to the bulk solution concentrations.The primary facet
in which the MD simulations departed from the
experimentally determined models was in the trend in micelle sizes
(Figure b). From the
ellipsoidal models generated by the SAXS analysis, the trend in micelle
volume was Fasted BSM ≈ Fed BSM (44–50
nm3) < FeSSIF (75–80 nm3) < Fasted MM ≈ Fed MM (88–114
nm3). In the simulated micelle systems the size of the
micelles was quantified as the number of course grain (CG) beads in
each cluster and these showed some similarities to the modeled micelle
volumes in that the BSMs contained fewer CG beads than
their corresponding MMs and FeSSIF. The
number of beads in the FeSSIF and Fed MM clusters was also found to be similar, which correlates reasonably
with the SAXS analysis. However, the Fasted BSMs and MMs possessed fewer beads than their Fed counterparts,
which were found to be of essentially the same volume in the SAXS
analysis. Upon examining the last 0.5 μs of simulation time
for each system it was found that the resulting micelle shapes and
sizes did not change significantly and neither did they do so in two
systems that were simulated for a further 2 μs. Assuming that
the models had therefore reached convergence within the initially
appointed 2 μs simulation time, it was again deemed that the
difference in micelle sizes between the MD and SAXS analyses resulted
from the lack of intrinsic hydrogen bonding capacity in the CG models
used.
Conclusions
Sodium taurodeoxycholate/DOPC solutions
demonstrated a consistent
homogeneity in oblate ellipsoidal micelle structure that was independent
of total lipid concentration (fed/fasted state), buffer identity and
concentration, freeze-drying, and dilution. The SAXS profiles from
these structures could also be modeled as monodisperse entities, suggesting
a highly uniform aggregation of the components throughout the media.
This shows the strong potential of this system as a standardized micelle
preparation to unify reports on mixed micelle solubilization studies
within the field. In contrast, commercially available simulated intestinal
fluids based on sodium taurocholate/lecithin showed a variety of structures
that were polydisperse. While the global shape and size of the FaSSIF particles were consistent with previously reported
electron microscopy data, SAXS analysis revealed that these structures
were vesicles and not fully dense micelles as originally reported. FeSSIF and FeSSIF V2 solutions both comprised
core–shell micelles and the SAXS analysis revealed that these
micelles were prolate. The axial elongation of the FeSSIF micelles by inclusion of glycerol oleate and sodium oleate in place
of lecithin in FeSSIF V2 is also a key indicator of FeSSIF behavior upon absorption of the digestion products
of triglycerides. It was also found that while the structures of the
smallest structural components of the SIF mixtures (micelles
and vesicles) were largely unchanged upon aging according to the SAXS
analysis, DLS revealed significant aggregation of the FeSSIF
V2 components that began immediately after preparation, continued
over the course of days and may need to be accounted for in solubility
studies utilizing FeSSIF V2 as the dissolution medium.
The results of coarse grained MD simulations were qualitatively similar
those of the SAXS analysis, revealing ellipsoidal micelles with similar
core–shell structures to those determined from the experimental
data. However, some discrepancies were observed in the type and size
of the ellipsoids formed, which were attributed to the absence of
implicit hydrogen bonding interactions in the coarse grained models
used in this work.
Authors: Siewert J Marrink; H Jelger Risselada; Serge Yefimov; D Peter Tieleman; Alex H de Vries Journal: J Phys Chem B Date: 2007-06-15 Impact factor: 2.991
Authors: Sarah Clarysse; Dimitrios Psachoulias; Joachim Brouwers; Jan Tack; Pieter Annaert; Guus Duchateau; Christos Reppas; Patrick Augustijns Journal: Pharm Res Date: 2009-03-07 Impact factor: 4.200
Authors: Woldeamanuel A Birru; Dallas B Warren; Stephen J Headey; Hassan Benameur; Christopher J H Porter; Colin W Pouton; David K Chalmers Journal: Mol Pharm Date: 2017-02-15 Impact factor: 4.939
Authors: Nafia F Khan; Malinda Salim; Syaza Y Binte Abu Bakar; Kurt Ristroph; Robert K Prud'homme; Adrian Hawley; Ben J Boyd; Andrew J Clulow Journal: Int J Pharm X Date: 2022-02-09
Authors: Shakhawath Hossain; Paul Joyce; Albin Parrow; Silver Jõemetsa; Fredrik Höök; Per Larsson; Christel A S Bergström Journal: Mol Pharm Date: 2020-10-08 Impact factor: 4.939