Literature DB >> 11969397

Molecular dynamics simulations of mixed micelles modeling human bile.

S J Marrink1, A E Mark.   

Abstract

Extensive molecular dynamics (MD) simulations of binary systems of phospholipids and bile salts, a model for human bile, have been performed. Recent progress in hardware and software development allows simulation of the spontaneous aggregation of the constituents into small mixed micelles, in agreement with experimental observations. The MD simulations reveal the structure of these micelles at atomic detail. The phospholipids are packed radially with their headgroups at the surface and the hydrophobic tails pointing toward the micellar center. The bile salts act as wedges between the phospholipid headgroups, with their hydrophilic sides exposed to the aqueous environment. The structure of the micelles strongly resembles the previously proposed radial shell model. Simulations including small fractions of cholesterol reveal how cholesterol is solubilized inside these mixed micelles without changing their overall structure.

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Year:  2002        PMID: 11969397     DOI: 10.1021/bi015613i

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  19 in total

Review 1.  Biliary cholesterol secretion by the twinned sterol half-transporters ABCG5 and ABCG8.

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Journal:  J Clin Invest       Date:  2002-09       Impact factor: 14.808

2.  Prospects of a computational origin of life endeavor.

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Authors:  Marc F Lensink; Cédric Govaerts; Jean-Marie Ruysschaert
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4.  Molecular dynamics simulations of E. coli MsbA transmembrane domain: formation of a semipore structure.

Authors:  David Y Haubertin; Hocine Madaoui; Alain Sanson; Raphaël Guérois; Stéphane Orlowski
Journal:  Biophys J       Date:  2006-06-16       Impact factor: 4.033

5.  Metastable and equilibrium phase diagrams of unconjugated bilirubin IXα as functions of pH in model bile systems: Implications for pigment gallstone formation.

Authors:  Marvin D Berman; Martin C Carey
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2014-10-30       Impact factor: 4.052

6.  Self-assembling of peptide/membrane complexes by atomistic molecular dynamics simulations.

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Journal:  Biophys J       Date:  2006-11-03       Impact factor: 4.033

7.  Glyceride lipid formulations: molecular dynamics modeling of phase behavior during dispersion and molecular interactions between drugs and excipients.

Authors:  Dallas B Warren; Dylan King; Hassan Benameur; Colin W Pouton; David K Chalmers
Journal:  Pharm Res       Date:  2013-10-03       Impact factor: 4.200

8.  Aggregation behavior of ibuprofen, cholic acid and dodecylphosphocholine micelles.

Authors:  Priyanka Prakash; Abdallah Sayyed-Ahmad; Yong Zhou; David E Volk; David G Gorenstein; Elizabeth Dial; Lenard M Lichtenberger; Alemayehu A Gorfe
Journal:  Biochim Biophys Acta       Date:  2012-08-04

9.  Molecular simulations of antimicrobial peptides.

Authors:  Allison Langham; Yiannis N Kaznessis
Journal:  Methods Mol Biol       Date:  2010

Review 10.  Key discoveries in bile acid chemistry and biology and their clinical applications: history of the last eight decades.

Authors:  Alan F Hofmann; Lee R Hagey
Journal:  J Lipid Res       Date:  2014-05-17       Impact factor: 5.922

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