| Literature DB >> 29088869 |
Muxiong Chen1,2, Wenpan Fang1,3, Xinkai Wu1, Suchen Bian1, Guangdi Chen1,3, Liqin Lu4, Yu Weng5.
Abstract
Previous studies have indicated an association between the genetic variant in pre-miR-27a rs895819 with A->G transition and cancer risk; however, the results remain inconsistent and somehow conflicting in different cancers. Therefore, to obtain a more reliable conclusion, we performed an update meta-analysis by searching PubMed database or other databases. Odds ratio (ORs) and 95% confidence interval (CIs) were calculated to evaluate cancer risk. A total of 34 case-control studies involving 15,388 cases and 18,704 controls were included. The results showed that rs895819 was associated with an increased cancer risk (GG vs. AA/AG: OR = 1.15, 95% CI = 1.02-1.29). Furthermore, stratification analyses revealed an association of rs895819 with increased cancer risk among Asians (GG vs. AA: OR = 1.17, 95% CI = 1.01-1.36; GG vs. AA/AG: OR = 1.18, 95% CI = 1.03-1.35), but not Caucasians. Interestingly, the [G] allele of rs895819 was significantly associated with decreased risk of breast cancer (G vs. A: OR = 0.91, 95% CI = 0.86-0.97). However, rs895819 was associated with increased risk of colorectal cancer (GG vs. AA: OR = 1.56, 95% CI = 1.31-1.85; GG vs. AA/AG: OR = 1.53, 95% CI = 1.30-1.79; G vs. A: OR = 1.19, 95% CI = 1.09-1.30) and lung cancer (GG vs. AA/AG: OR = 1.43, 95% CI = 1.00-2.04). In addition, no association was found between rs895819 and risk of gastric cancer or esophageal cancer. In conclusion, our findings suggest distinct effects of rs895819 on risk of different cancers, and future well-designed studies with large samples are required to further validate our results.Entities:
Keywords: cancer risk; genetic variant; meta-analysis; miR-27a
Year: 2017 PMID: 29088869 PMCID: PMC5650424 DOI: 10.18632/oncotarget.17454
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flow diagram of studies identification
Characteristics of studies included in the meta-analysis
| Author | Year | Origin | Ethnicity | Cancer type | Sample size (case/control) | HWE | MAF | Design | Genotyping method |
|---|---|---|---|---|---|---|---|---|---|
| Yang R | 2010 | Germany | German | Breast cancer | 1189/1416 | 0.142 | 0.340 | PB | DNA Sequencingg |
| Zhang P | 2011 | China | Chinese | Breast cancer | 376/190 | 0.605 | 0.258 | PB | MassARRAY |
| Catucci I | 2012 | Italy | Italian | Breast cancer | 1025/1593 | 0.051 | 0.297 | PB | TaqMan |
| Zhang M | 2012 | China | Chinese | Breast cancer | 245/243 | 0.122 | 0.467 | PB | PCR-RFLP |
| Zhang N | 2013 | China | Chinese | Breast cancer | 264/255 | 0.446 | 0.261 | HB | TaqMan |
| Wang P | 2014 | China | Chinese | Breast cancer | 107/219 | 0.537 | 0.237 | HB | PCR-RFLP |
| Qi P | 2015 | China | Chinese | Breast cancer | 321/290 | 0.686 | 0.433 | PB | TaqMan |
| Morales S | 2016 | America | American | Breast cancer | 440/807 | 0.017 | 0.280 | HB | TaqMan |
| Sun Q | 2010 | China | Chinese | Gastric cancer | 304/304 | 0.053 | 0.327 | HB | PCR-RFLP |
| Zhou Y | 2012 | China | Chinese | Gastric cancer | 295/413 | 0.941 | 0.280 | HB | MALDI-TOF |
| Xu Q | 2013 | China | Chinese | Gastric cancer | 222/305 | 0.437 | 0.252 | HB | DNA Sequencingg |
| Yang Q | 2014 | China | Chinese | Gastric cancer | 592/978 | 0.517 | 0.383 | PB | TaqMan |
| Kupcinskas J | 2014 | Latvia | Lithuanian | Gastric cancer | 363/350 | 0.151 | 0.320 | HB | TaqMan |
| Song B | 2014 | China | Chinese | Gastric cancer | 278/278 | 0.110 | 0.329 | HB | TaqMan |
| Jiang J | 2016 | China | Chinese | Gastric cancer | 895/988 | 0.447 | 0.260 | HB | MassARRAY |
| Xu Q | 2017 | China | Chinese | Gastric cancer | 1067/1166 | 0.161 | 0.247 | HB | MALDI-TOF MS |
| Zhang M | 2012 | China | Chinese | Colorectal cancer | 463/468 | 0.351 | 0.246 | PB | PCR-RFLP |
| Hezova R | 2012 | Czech | Caucasian | Colorectal cancer | 197/212 | 0.867 | 0.340 | HB | TaqMan |
| Wang Z | 2014 | China | Chinese | Colorectal cancer | 205/455 | 2.156 | 0.524 | HB | TaqMan |
| Kupcinskas J | 2014 | Latvia | Lithuanian | Colorectal cancer | 191/428 | 0.235 | 0.303 | HB | TaqMan |
| Cao Y | 2014 | China | Chinese | Colorectal cancer | 254/238 | 0.089 | 0.326 | HB | PCR–RFLP |
| Wu R | 2014 | China | Chinese | Colorectal cancer | 151/283 | 0.016 | 0.201 | HB | DNA Sequencingg |
| Bian Q | 2015 | China | Chinese | Colorectal cancer | 412/412 | 0.389 | 0.301 | HB | TaqMan |
| Jiang Y | 2016 | China | Chinese | Colorectal cancer | 508/562 | 0.053 | 0.313 | HB | TaqMan |
| Wei J | 2013 | China | Chinese | Esophageal Cancer | 379/377 | 0.322 | 0.264 | HB | MALDI-TOF MSS |
| Zhang J | 2014 | China | Chinese | Esophageal Cancer | 1109/1275 | 0.226 | 0.253 | PB | PCR |
| Ma J Y | 2015 | China | Chinese | Lung cancer | 542/557 | 0.015 | 0.308 | HB | TaqMan |
| Yin Z | 2015 | China | Chinese | Lung cancer | 167/228 | 0.282 | 0.228 | HB | TaqMan |
| Yin Z | 2016 | China | Chinese | Lung cancer | 575/608 | 0.199 | 0.270 | HB | TaqMan |
| Li P | 2011 | China | Chinese | Nasopharyngeal Cancer | 801/1022 | 0.658 | 0.295 | HB | SNP Stream |
| Shi D | 2011 | China | Chinese | Renal cancer | 594/600 | 0.373 | 0.302 | HB | TaqMan |
| Li P | 2011 | China | Chinese | Liver Cancer | 401/459 | 0.751 | 0.285 | HB | SNP Stream |
| Xiong X D | 2014 | China | Chinese | Cervical Cancer | 103/417 | 0.255 | 0.261 | HB | DNA Sequencing |
| Nikolic Z | 2015 | Serbia | Serbian | Prostate cancer | 353/308 | 0.101 | 0.284 | HB | PCR–RFLP |
Abbreviations: HWE, Hardy-Weinberg equilibrium; MAF, minor allele frequency; HB, Hospital based controls; PB, population based controls; PCR, Polymerase chain reaction; RFLP, Restriction fragment length polymorphism; MALDI-TOF, Matrix-assisted laser desorption/ ionization- time of flight.
Stratified analysis of the association between miR-27a polymorphisms and cancer risk
| All | 34 | 0.95 (0.85–1.06) | < 0.001 | 1.13 (1.00–1.29) | < 0.001 | 0.99 (0.91–1.09) | < 0.001 | < 0.001 | 1.03 (0.96–1.10) | < 0.001 | |
| Cancer types | |||||||||||
| Breast cancer | 8 | 0.93 (0.77–1.11) | 0.002 | 0.88 (0.76–1.02) | 0.834 | 0.91 (0.80–1.05) | 0.052 | 0.90 (0.77–1.05) | 0.351 | 0.682 | |
| Gastric cancer | 8 | 0.94 (0.66–1.34) | < 0.001 | 1.00 (0.74–1.37) | 0.001 | 0.97 (0.72–1.31) | < 0.001 | 1.08 (0.83–1.40) | 0.008 | 1.00 (0.84–1.19) | < 0.001 |
| Colorectal cancer | 8 | 0.97 (0.78–1.20) | 0.005 | 0.758 | 1.10 (0.94–1.29) | 0.067 | 0.582 | 0.351 | |||
| Lung cancer | 3 | 0.95 (0.81–1.12) | 0.416 | 1.41 (0.92–2.15) | 0.144 | 1.05 (0.84–1.31) | 0.142 | 0.219 | 1.12 (0.89–1.40) | 0.038 | |
| Esophageal cancer | 2 | 1.03 (0.89–1.19) | 0.775 | 0.88 (0.55–1.43) | 0.140 | 1.02 (0.88–1.17) | 0.479 | 0.88 (0.55–1.40) | 0.147 | 0.99 (0.86–1.14) | 0.247 |
| Other types | 5 | 0.95 (0.75–1.20) | 0.008 | 1.18 (0.78–1.79) | 0.008 | 0.99 (0.77–1.27) | 0.002 | 1.18 (0.83–1.68) | 0.034 | 1.03 (0.84–1.26) | 0.001 |
| Ethnic | |||||||||||
| Asian | 27 | 0.96 (0.84–1.10) | < 0.001 | < 0.001 | 1.01 (0.90–1.14) | < 0.001 | < 0.001 | 1.04 (0.97–1.13) | < 0.001 | ||
| Caucasian | 7 | 0.91 (0.80–1.02) | 0.146 | 0.98 (0.79–1.22) | 0.110 | 0.92 (0.82–1.03) | 0.131 | 1.03 (0.84–1.26) | 0.124 | 0.96 (0.87–1.05) | 0.114 |
| Source of controls | |||||||||||
| HB | 26 | 0.97 (0.89–1.07) | < 0.001 | < 0.001 | 1.02 (0.93–1.12) | < 0.001 | < 0.001 | 1.06 (0.98–1.14) | < 0.001 | ||
| PB | 8 | 0.91 (0.67–1.24) | < 0.001 | 0.92 (0.81–1.05) | 0.736 | 0.92 (0.72–1.18) | < 0.001 | 1.01 (0.87–1.16) | 0.222 | 0.94 (0.84–1.06) | < 0.001 |
aNumber of comparisons.
bThe crude OR and 95% CI were calculated based on the genotype frequencies.
cP value of Q-test for heterogeneity analysis.
Figure 2Forest plots of heterozygote for meta-analysis on the association of rs895819 with cancer risk
The squares and horizontal lines correspond to OR and 95% CI of specific study, and the area of squares reflects study weight (inverse of the variance). The diamond represents the pooled OR and its 95% CI.
Figure 6Forest plots of additive model for meta-analysis on the association of rs895819 with cancer risk
The squares and horizontal lines correspond to OR and 95% CI of specific study, and the area of squares reflects study weight (inverse of the variance). The diamond represents the pooled OR and its 95% CI.
Figure 7Funnel plots showed symmetric or asymmetric distribution
Log OR was plotted against the standard error of log OR for studies on rs895819 in heterozygous (A), homozygous (B), dominant (C), recessive (D) or additive model (E). The dots represent specific studies for the indicated association.