| Literature DB >> 29077040 |
Yangyang Fan1,2, Tao Wang3,4, Zhengjun Qiu5,6, Jiyu Peng7,8, Chu Zhang9,10, Yong He11,12.
Abstract
Striped stem-borer (SSB) infestation is one of the most serious sources of damage to rice growth. A rapid and non-destructive method of early SSB detection is essential for rice-growth protection. In this study, hyperspectral imaging combined with chemometrics was used to detect early SSB infestation in rice and identify the degree of infestation (DI). Visible/near-infrared hyperspectral images (in the spectral range of 380 nm to 1030 nm) were taken of the healthy rice plants and infested rice plants by SSB for 2, 4, 6, 8 and 10 days. A total of 17 characteristic wavelengths were selected from the spectral data extracted from the hyperspectral images by the successive projection algorithm (SPA). Principal component analysis (PCA) was applied to the hyperspectral images, and 16 textural features based on the gray-level co-occurrence matrix (GLCM) were extracted from the first two principal component (PC) images. A back-propagation neural network (BPNN) was used to establish infestation degree evaluation models based on full spectra, characteristic wavelengths, textural features and features fusion, respectively. BPNN models based on a fusion of characteristic wavelengths and textural features achieved the best performance, with classification accuracy of calibration and prediction sets over 95%. The accuracy of each infestation degree was satisfactory, and the accuracy of rice samples infested for 2 days was slightly low. In all, this study indicated the feasibility of hyperspectral imaging techniques to detect early SSB infestation and identify degrees of infestation.Entities:
Keywords: data fusion; hyperspectral imaging; rice; striped stem-borer; texture feature
Mesh:
Year: 2017 PMID: 29077040 PMCID: PMC5713110 DOI: 10.3390/s17112470
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Figure 1Samples of six degrees of infestation: (a) DI0; (b) DI1; (c) DI2; (d) DI3; (e) DI4; (f) DI5.
Figure 2Average spectral curves of samples in six degrees of infestation.
Figure 3Scores’ scatter plots of samples in six degrees of infestation.
Detection accuracy of six infestation degrees by the BPNN model based on full spectra.
| Model | Actual Value | Calibration Set | Prediction Set | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DI 10 | DI1 | DI2 | DI3 | DI4 | DI5 | Accuracy | DI0 | DI1 | DI2 | DI3 | DI4 | DI5 | Accuracy | ||
| BPNN | DI0 | 23 | 6 | 0 | 0 | 1 | 0 | 76.67% | 9 | 5 | 0 | 0 | 1 | 0 | 60% |
| DI1 | 3 | 43 | 0 | 0 | 0 | 0 | 93.48% | 1 | 22 | 0 | 0 | 0 | 0 | 95.65% | |
| DI2 | 0 | 0 | 46 | 0 | 0 | 0 | 100% | 0 | 0 | 23 | 0 | 0 | 0 | 100% | |
| DI3 | 1 | 0 | 0 | 44 | 0 | 1 | 95.65% | 0 | 0 | 0 | 22 | 0 | 1 | 95.65% | |
| DI4 | 0 | 0 | 0 | 0 | 46 | 0 | 100% | 0 | 0 | 0 | 0 | 23 | 0 | 100% | |
| DI5 | 0 | 0 | 0 | 0 | 0 | 29 | 100% | 0 | 0 | 0 | 0 | 0 | 15 | 100% | |
| Total | 95.06% | 93.44% | |||||||||||||
1 Degree of infestation.
Figure 4Selection of characteristic wavelengths by the successive projection algorithm (SPA): (a) numbers of characteristic wavelengths with the minimum root mean square error (RMSE); (b) distribution of characteristic wavelengths in the full band.
Detection accuracy of infestation degrees by the BPNN model based on characteristic wavelengths.
| Model | Actual Value | Calibration Set | Prediction Set | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DI 10 | DI1 | DI2 | DI3 | DI4 | DI5 | Accuracy | DI0 | DI1 | DI2 | DI3 | DI4 | DI5 | Accuracy | ||
| BPNN | DI0 | 24 | 2 | 1 | 0 | 3 | 0 | 80% | 13 | 0 | 1 | 0 | 1 | 0 | 86.67% |
| DI1 | 5 | 40 | 0 | 0 | 1 | 0 | 86.96% | 4 | 18 | 0 | 0 | 1 | 0 | 78.26% | |
| DI2 | 0 | 0 | 45 | 1 | 0 | 0 | 97.83% | 0 | 0 | 22 | 1 | 0 | 0 | 95.65% | |
| DI3 | 0 | 0 | 1 | 44 | 0 | 1 | 95.65% | 0 | 0 | 0 | 22 | 0 | 1 | 95.65% | |
| DI4 | 0 | 1 | 0 | 0 | 44 | 1 | 95.65% | 0 | 0 | 0 | 0 | 22 | 1 | 95.65% | |
| DI5 | 0 | 0 | 0 | 0 | 1 | 28 | 96.55% | 0 | 0 | 0 | 0 | 1 | 14 | 93.33% | |
| Total | 92.59% | 90.98% | |||||||||||||
1 Degree of infestation.
Figure 5Texture feature images and PC images of a rice sample.
Detection accuracy of infestation degrees by the BPNN model based on the GLCM features.
| Model | Actual Value | Calibration Set | Prediction Set | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DI 10 | DI1 | DI2 | DI3 | DI4 | DI5 | Accuracy | DI0 | DI1 | DI2 | DI3 | DI4 | DI5 | Accuracy | ||
| BPNN | DI0 | 30 | 0 | 0 | 0 | 0 | 0 | 100% | 15 | 0 | 0 | 0 | 0 | 0 | 100% |
| DI1 | 9 | 25 | 3 | 5 | 3 | 1 | 54.35% | 3 | 12 | 2 | 3 | 3 | 0 | 52.17% | |
| DI2 | 0 | 1 | 32 | 10 | 1 | 2 | 69.57% | 0 | 0 | 16 | 4 | 1 | 2 | 69.57% | |
| DI3 | 0 | 5 | 10 | 26 | 2 | 3 | 56.52% | 0 | 2 | 6 | 14 | 0 | 1 | 60.87% | |
| DI4 | 0 | 0 | 2 | 1 | 38 | 5 | 82.61% | 0 | 0 | 1 | 0 | 19 | 3 | 82.61% | |
| DI5 | 0 | 0 | 0 | 4 | 2 | 23 | 79.31% | 0 | 0 | 0 | 2 | 0 | 13 | 86.67% | |
| Total | 71.60% | 72.95% | |||||||||||||
1 Degree of infestation.
Detection accuracy of infestation degrees by the BPNN model based on data fusion.
| Model | Actual Value | Calibration Set | Prediction Set | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DI 10 | DI1 | DI2 | DI3 | DI4 | DI5 | Accuracy | DI0 | DI1 | DI2 | DI3 | DI4 | DI5 | Accuracy | ||
| BPNN | DI0 | 29 | 1 | 0 | 0 | 0 | 0 | 100% | 15 | 0 | 0 | 0 | 0 | 0 | 100% |
| DI1 | 4 | 42 | 0 | 0 | 0 | 0 | 82.61% | 4 | 19 | 0 | 0 | 0 | 0 | 82.61% | |
| DI2 | 0 | 1 | 45 | 0 | 0 | 0 | 95.65% | 0 | 1 | 22 | 0 | 0 | 0 | 95.65% | |
| DI3 | 0 | 0 | 1 | 44 | 1 | 0 | 100% | 0 | 0 | 0 | 23 | 0 | 0 | 100% | |
| DI4 | 0 | 1 | 0 | 2 | 43 | 0 | 95.65% | 0 | 0 | 0 | 1 | 22 | 0 | 95.65% | |
| DI5 | 0 | 0 | 0 | 0 | 1 | 28 | 100% | 0 | 0 | 0 | 0 | 0 | 15 | 100% | |
| Total | 95.06% | 95.10% | |||||||||||||
1 Degree of infestation.
Run time of the BPNN models based on different data sets.
| Data Set | Run Time |
|---|---|
| Full spectra | 16.91s |
| Characteristic wavelength | 3.86 s |
| Texture features | 1.64 s |
| Data fusion | 1.80 s |