Literature DB >> 26953178

Principal component analysis: a review and recent developments.

Ian T Jolliffe1, Jorge Cadima2.   

Abstract

Large datasets are increasingly common and are often difficult to interpret. Principal component analysis (PCA) is a technique for reducing the dimensionality of such datasets, increasing interpretability but at the same time minimizing information loss. It does so by creating new uncorrelated variables that successively maximize variance. Finding such new variables, the principal components, reduces to solving an eigenvalue/eigenvector problem, and the new variables are defined by the dataset at hand, not a priori, hence making PCA an adaptive data analysis technique. It is adaptive in another sense too, since variants of the technique have been developed that are tailored to various different data types and structures. This article will begin by introducing the basic ideas of PCA, discussing what it can and cannot do. It will then describe some variants of PCA and their application.
© 2016 The Author(s).

Keywords:  dimension reduction; eigenvectors; multivariate analysis; palaeontology

Year:  2016        PMID: 26953178      PMCID: PMC4792409          DOI: 10.1098/rsta.2015.0202

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  7 in total

1.  What is principal component analysis?

Authors:  Markus Ringnér
Journal:  Nat Biotechnol       Date:  2008-03       Impact factor: 54.908

2.  A penalized matrix decomposition, with applications to sparse principal components and canonical correlation analysis.

Authors:  Daniela M Witten; Robert Tibshirani; Trevor Hastie
Journal:  Biostatistics       Date:  2009-04-17       Impact factor: 5.899

3.  Dietary specializations and diversity in feeding ecology of the earliest stem mammals.

Authors:  Pamela G Gill; Mark A Purnell; Nick Crumpton; Kate Robson Brown; Neil J Gostling; M Stampanoni; Emily J Rayfield
Journal:  Nature       Date:  2014-08-21       Impact factor: 49.962

4.  On Consistency and Sparsity for Principal Components Analysis in High Dimensions.

Authors:  Iain M Johnstone; Arthur Yu Lu
Journal:  J Am Stat Assoc       Date:  2009-06-01       Impact factor: 5.033

5.  MINIMAX BOUNDS FOR SPARSE PCA WITH NOISY HIGH-DIMENSIONAL DATA.

Authors:  Aharon Birnbaum; Iain M Johnstone; Boaz Nadler; Debashis Paul
Journal:  Ann Stat       Date:  2013-06       Impact factor: 4.028

6.  Super-sparse principal component analyses for high-throughput genomic data.

Authors:  Donghwan Lee; Woojoo Lee; Youngjo Lee; Yudi Pawitan
Journal:  BMC Bioinformatics       Date:  2010-06-02       Impact factor: 3.169

7.  Selecting the Number of Principal Components in Functional Data.

Authors:  Yehua Li; Naisyin Wang; Raymond J Carroll
Journal:  J Am Stat Assoc       Date:  2013-12-19       Impact factor: 5.033

  7 in total
  541 in total

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Authors:  Gulam Muhammed Al Kibria; Krystal Swasey; Allysha Choudhury; Vanessa Burrowes; Kristen A Stafford; S M Iftekhar Uddin; Mohammadhassan Mirbolouk; Atia Sharmeen; Angela Kc; Dipak K Mitra
Journal:  J Hum Hypertens       Date:  2018-06-13       Impact factor: 3.012

6.  Contactless monitoring of the blood-flow changes in upper limbs.

Authors:  Valeriy V Zaytsev; Serguei V Miridonov; Oleg V Mamontov; Alexei A Kamshilin
Journal:  Biomed Opt Express       Date:  2018-10-12       Impact factor: 3.732

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Journal:  J Nat Med       Date:  2016-09-24       Impact factor: 2.343

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Authors:  Ji Sun Choi; Yelena Ilin; Mary L Kraft; Brendan A C Harley
Journal:  Bioconjug Chem       Date:  2018-09-06       Impact factor: 4.774

9.  Adaptive Sparsity Regularization Based Collaborative Clustering for Cancer Prognosis.

Authors:  Hangfan Liu; Hongming Li; Yuemeng Li; Shi Yin; Pamela Boimel; James Janopaul-Naylor; Haoyu Zhong; Ying Xiao; Edgar Ben-Josef; Yong Fan
Journal:  Med Image Comput Comput Assist Interv       Date:  2019-10-10

10.  Derivation and Validation of the Periodontal and Tooth Profile Classification System for Patient Stratification.

Authors:  Thiago Morelli; Kevin L Moss; James Beck; John S Preisser; Di Wu; Kimon Divaris; Steven Offenbacher
Journal:  J Periodontol       Date:  2016-09-13       Impact factor: 6.993

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