Literature DB >> 29068531

Intrinsically Disordered Proteome of Human Membrane-Less Organelles.

April L Darling1, Yun Liu2, Christopher J Oldfield3, Vladimir N Uversky1,4.   

Abstract

It is recognized now that various proteinaceous membrane-less organelles (PMLOs) are commonly found in cytoplasm, nucleus, and mitochondria of various eukaryotic cells (as well as in the chloroplasts of plant cells). Being different from the "traditional" membrane-encapsulated organelles, such as chloroplasts, endoplasmic reticulum, Golgi apparatus, lysosomes, mitochondria, nucleus, and vacuoles, PMLOs solve the cellular need to facilitate and regulate molecular interactions via reversible and controllable isolation of target molecules in specialized compartments. PMLOs possess liquid-like behavior and are believed to be formed as a result of biological liquid-liquid phase transitions (LLPTs, also known as liquid-liquid phase separation), where an intricate interplay between RNA and intrinsically disordered proteins (IDPs) or hybrid proteins containing ordered domains and intrinsically disordered protein regions (IDPRs) may play an important role. This review analyzes the prevalence of intrinsic disorder in proteins associated with various PMLOs found in human cells and considers some of the functional roles of IDPs/IDPRs in biogenesis of these organelles.
© 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  intrinsically disordered proteins; liquid-liquid phase transition; phase separation; protein-nucleic acid interactions; proteinaceous membrane-less organelle

Mesh:

Substances:

Year:  2017        PMID: 29068531     DOI: 10.1002/pmic.201700193

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  57 in total

Review 1.  Features of molecular recognition of intrinsically disordered proteins via coupled folding and binding.

Authors:  Jing Yang; Meng Gao; Junwen Xiong; Zhengding Su; Yongqi Huang
Journal:  Protein Sci       Date:  2019-09-04       Impact factor: 6.725

Review 2.  The Structural and Functional Diversity of Intrinsically Disordered Regions in Transmembrane Proteins.

Authors:  Rajeswari Appadurai; Vladimir N Uversky; Anand Srivastava
Journal:  J Membr Biol       Date:  2019-05-28       Impact factor: 1.843

Review 3.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

4.  IDPology of the living cell: intrinsic disorder in the subcellular compartments of the human cell.

Authors:  Bi Zhao; Akila Katuwawala; Vladimir N Uversky; Lukasz Kurgan
Journal:  Cell Mol Life Sci       Date:  2020-09-30       Impact factor: 9.261

Review 5.  Bacterial functional amyloids: Order from disorder.

Authors:  Neha Jain; Matthew R Chapman
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2019-06-10       Impact factor: 3.036

6.  Liquid network connectivity regulates the stability and composition of biomolecular condensates with many components.

Authors:  Jorge R Espinosa; Jerelle A Joseph; Ignacio Sanchez-Burgos; Adiran Garaizar; Daan Frenkel; Rosana Collepardo-Guevara
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-01       Impact factor: 11.205

7.  Identifying sequence perturbations to an intrinsically disordered protein that determine its phase-separation behavior.

Authors:  Benjamin S Schuster; Gregory L Dignon; Wai Shing Tang; Fleurie M Kelley; Aishwarya Kanchi Ranganath; Craig N Jahnke; Alison G Simpkins; Roshan Mammen Regy; Daniel A Hammer; Matthew C Good; Jeetain Mittal
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-11       Impact factor: 11.205

8.  Transcription Factors Activate Genes through the Phase-Separation Capacity of Their Activation Domains.

Authors:  Ann Boija; Isaac A Klein; Benjamin R Sabari; Alessandra Dall'Agnese; Eliot L Coffey; Alicia V Zamudio; Charles H Li; Krishna Shrinivas; John C Manteiga; Nancy M Hannett; Brian J Abraham; Lena K Afeyan; Yang E Guo; Jenna K Rimel; Charli B Fant; Jurian Schuijers; Tong Ihn Lee; Dylan J Taatjes; Richard A Young
Journal:  Cell       Date:  2018-11-15       Impact factor: 41.582

Review 9.  Biomolecular Phase Separation: From Molecular Driving Forces to Macroscopic Properties.

Authors:  Gregory L Dignon; Robert B Best; Jeetain Mittal
Journal:  Annu Rev Phys Chem       Date:  2020-04-20       Impact factor: 12.703

10.  The N terminus of the small heat shock protein HSPB7 drives its polyQ aggregation-suppressing activity.

Authors:  Di Wu; Jan J Vonk; Felix Salles; Danara Vonk; Martin Haslbeck; Ronald Melki; Steven Bergink; Harm H Kampinga
Journal:  J Biol Chem       Date:  2019-05-16       Impact factor: 5.157

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