Literature DB >> 29064494

Synthesis facilitates an understanding of the structural basis for translation inhibition by the lissoclimides.

Zef A Könst1, Anne R Szklarski1, Simone Pellegrino2, Sharon E Michalak1, Mélanie Meyer2, Camila Zanette3, Regina Cencic4, Sangkil Nam5, Vamsee K Voora1, David A Horne5, Jerry Pelletier4, David L Mobley3, Gulnara Yusupova2, Marat Yusupov2, Christopher D Vanderwal1.   

Abstract

The lissoclimides are unusual succinimide-containing labdane diterpenoids that were reported to be potent cytotoxins. Our short semisynthesis and analogue-oriented synthesis approaches provide a series of lissoclimide natural products and analogues that expand the structure-activity relationships (SARs) in this family. The semisynthesis approach yielded significant quantities of chlorolissoclimide (CL) to permit an evaluation against the National Cancer Institute's 60-cell line panel and allowed us to obtain an X-ray co-crystal structure of the synthetic secondary metabolite with the eukaryotic 80S ribosome. Although it shares a binding site with other imide-based natural product translation inhibitors, CL engages in a particularly interesting and novel face-on halogen-π interaction between the ligand's alkyl chloride and a guanine residue. Our analogue-oriented synthesis provides many more lissoclimide compounds, which were tested against aggressive human cancer cell lines and for protein synthesis inhibitory activity. Finally, computational modelling was used to explain the SARs of certain key compounds and set the stage for the structure-guided design of better translation inhibitors.

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Year:  2017        PMID: 29064494      PMCID: PMC6021127          DOI: 10.1038/nchem.2800

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  34 in total

Review 1.  One core, two shells: bacterial and eukaryotic ribosomes.

Authors:  Sergey Melnikov; Adam Ben-Shem; Nicolas Garreau de Loubresse; Lasse Jenner; Gulnara Yusupova; Marat Yusupov
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

2.  Iso-migrastatin congeners from Streptomyces platensis and generation of a glutarimide polyketide library featuring the dorrigocin, lactimidomycin, migrastatin, and NK30424 scaffolds.

Authors:  Jianhua Ju; Si-Kyu Lim; Hui Jiang; Jeong-Woo Seo; Ben Shen
Journal:  J Am Chem Soc       Date:  2005-08-31       Impact factor: 15.419

3.  Measurement of tumour protein synthesis in vivo in human colorectal and breast cancer and its variability in separate biopsies from the same tumour.

Authors:  S D Heys; K G Park; M A McNurlan; A G Calder; V Buchan; K Blessing; O Eremin; P J Garlick
Journal:  Clin Sci (Lond)       Date:  1991-06       Impact factor: 6.124

4.  Cl-pi interactions in protein-ligand complexes.

Authors:  Yumi N Imai; Yoshihisa Inoue; Isao Nakanishi; Kazuo Kitaura
Journal:  Protein Sci       Date:  2008-04-23       Impact factor: 6.725

5.  Haterumaimides F-I, four new cytotoxic diterpene alkaloids from an ascidian Lissoclinum species.

Authors:  M J Uddin; S Kokubo; K Ueda; K Suenaga; D Uemura
Journal:  J Nat Prod       Date:  2001-09       Impact factor: 4.050

6.  Chlorolissoclimides: new inhibitors of eukaryotic protein synthesis.

Authors:  Francis Robert; Hong Qing Gao; Marwa Donia; William C Merrick; Mark T Hamann; Jerry Pelletier
Journal:  RNA       Date:  2006-03-15       Impact factor: 4.942

7.  Stereoselective dichlorination of allylic alcohol derivatives to access key stereochemical arrays of the chlorosulfolipids.

Authors:  Grant M Shibuya; Jacob S Kanady; Christopher D Vanderwal
Journal:  J Am Chem Soc       Date:  2008-08-22       Impact factor: 15.419

8.  Decoding human cytomegalovirus.

Authors:  Noam Stern-Ginossar; Ben Weisburd; Annette Michalski; Vu Thuy Khanh Le; Marco Y Hein; Sheng-Xiong Huang; Ming Ma; Ben Shen; Shu-Bing Qian; Hartmut Hengel; Matthias Mann; Nicholas T Ingolia; Jonathan S Weissman
Journal:  Science       Date:  2012-11-23       Impact factor: 47.728

9.  A synthesis of the ABC tricyclic core of the clionastatins serves to corroborate their proposed structures.

Authors:  Samuel S Tartakoff; Christopher D Vanderwal
Journal:  Org Lett       Date:  2014-02-26       Impact factor: 6.005

10.  A platform for the discovery of new macrolide antibiotics.

Authors:  Ian B Seiple; Ziyang Zhang; Pavol Jakubec; Audrey Langlois-Mercier; Peter M Wright; Daniel T Hog; Kazuo Yabu; Senkara Rao Allu; Takehiro Fukuzaki; Peter N Carlsen; Yoshiaki Kitamura; Xiang Zhou; Matthew L Condakes; Filip T Szczypiński; William D Green; Andrew G Myers
Journal:  Nature       Date:  2016-05-19       Impact factor: 49.962

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  8 in total

1.  A Chlorine-Atom-Controlled Terminal-Epoxide-Initiated Bicyclization Cascade Enables a Synthesis of the Potent Cytotoxins Haterumaimides J and K.

Authors:  Sharon E Michalak; Sangkil Nam; David M Kwon; David A Horne; Christopher D Vanderwal
Journal:  J Am Chem Soc       Date:  2019-06-03       Impact factor: 15.419

2.  Bridging the gap between natural product synthesis and drug discovery.

Authors:  Nathanyal J Truax; Daniel Romo
Journal:  Nat Prod Rep       Date:  2020-10-26       Impact factor: 13.423

Review 3.  The Recurring Roles of Chlorine in Synthetic and Biological Studies of the Lissoclimides.

Authors:  Bonnie S Pak; Nantamon Supantanapong; Christopher D Vanderwal
Journal:  Acc Chem Res       Date:  2021-02-05       Impact factor: 22.384

4.  Development of Potential Antitumor Agents from the Scaffolds of Plant-Derived Terpenoid Lactones.

Authors:  Yulin Ren; A Douglas Kinghorn
Journal:  J Med Chem       Date:  2020-12-08       Impact factor: 7.446

5.  Expanding the antibacterial selectivity of polyether ionophore antibiotics through diversity-focused semisynthesis.

Authors:  Shaoquan Lin; Han Liu; Esben B Svenningsen; Malene Wollesen; Kristian M Jacobsen; Frederikke D Andersen; Jaime Moyano-Villameriel; Christine N Pedersen; Peter Nørby; Thomas Tørring; Thomas B Poulsen
Journal:  Nat Chem       Date:  2020-12-22       Impact factor: 24.427

Review 6.  A Quick Guide to Small-Molecule Inhibitors of Eukaryotic Protein Synthesis.

Authors:  S E Dmitriev; D O Vladimirov; K A Lashkevich
Journal:  Biochemistry (Mosc)       Date:  2020-11       Impact factor: 2.487

7.  Harnessing Natural Products by a Pharmacophore-Oriented Semisynthesis Approach for the Discovery of Potential Anti-SARS-CoV-2 Agents.

Authors:  Yuan-Fei Zhou; Bing-Chao Yan; Qian Yang; Xin-Yan Long; Dan-Qi Zhang; Rong-Hua Luo; Han-Yu Wang; Han-Dong Sun; Xiao-Song Xue; Yong-Tang Zheng; Pema-Tenzin Puno
Journal:  Angew Chem Int Ed Engl       Date:  2022-05-12       Impact factor: 16.823

Review 8.  Ascidian Toxins with Potential for Drug Development.

Authors:  Dianne J Watters
Journal:  Mar Drugs       Date:  2018-05-13       Impact factor: 5.118

  8 in total

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