Literature DB >> 29051796

ACTIVE MEAN FIELDS FOR PROBABILISTIC IMAGE SEGMENTATION: CONNECTIONS WITH CHAN-VESE AND RUDIN-OSHER-FATEMI MODELS.

Marc Niethammer1, Kilian M Pohl2, Firdaus Janoos3, William M Wells4.   

Abstract

Segmentation is a fundamental task for extracting semantically meaningful regions from an image. The goal of segmentation algorithms is to accurately assign object labels to each image location. However, image-noise, shortcomings of algorithms, and image ambiguities cause uncertainty in label assignment. Estimating the uncertainty in label assignment is important in multiple application domains, such as segmenting tumors from medical images for radiation treatment planning. One way to estimate these uncertainties is through the computation of posteriors of Bayesian models, which is computationally prohibitive for many practical applications. On the other hand, most computationally efficient methods fail to estimate label uncertainty. We therefore propose in this paper the Active Mean Fields (AMF) approach, a technique based on Bayesian modeling that uses a mean-field approximation to efficiently compute a segmentation and its corresponding uncertainty. Based on a variational formulation, the resulting convex model combines any label-likelihood measure with a prior on the length of the segmentation boundary. A specific implementation of that model is the Chan-Vese segmentation model (CV), in which the binary segmentation task is defined by a Gaussian likelihood and a prior regularizing the length of the segmentation boundary. Furthermore, the Euler-Lagrange equations derived from the AMF model are equivalent to those of the popular Rudin-Osher-Fatemi (ROF) model for image denoising. Solutions to the AMF model can thus be implemented by directly utilizing highly-efficient ROF solvers on log-likelihood ratio fields. We qualitatively assess the approach on synthetic data as well as on real natural and medical images. For a quantitative evaluation, we apply our approach to the icgbench dataset.

Entities:  

Keywords:  Chan-Vese model; Rudin-Osher-Fatemi model; Segmentation; mean-field approximation

Year:  2017        PMID: 29051796      PMCID: PMC5642306          DOI: 10.1137/16M1058601

Source DB:  PubMed          Journal:  SIAM J Imaging Sci        ISSN: 1936-4954            Impact factor:   2.867


  17 in total

1.  Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm.

Authors:  Y Zhang; M Brady; S Smith
Journal:  IEEE Trans Med Imaging       Date:  2001-01       Impact factor: 10.048

2.  Globally minimal surfaces by continuous maximal flows.

Authors:  Ben Appleton; Hugues Talbot
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-01       Impact factor: 6.226

3.  Active mean fields: solving the mean field approximation in the level set framework.

Authors:  Kilian M Pohl; Ron Kikinis; William M Wells
Journal:  Inf Process Med Imaging       Date:  2007

4.  Active contours without edges.

Authors:  T F Chan; L A Vese
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

5.  Using the logarithm of odds to define a vector space on probabilistic atlases.

Authors:  Kilian M Pohl; John Fisher; Sylvain Bouix; Martha Shenton; Robert W McCarley; W Eric L Grimson; Ron Kikinis; William M Wells
Journal:  Med Image Anal       Date:  2007-06-22       Impact factor: 8.545

6.  Correlation of contouring variation with modeled outcome for conformal non-small cell lung cancer radiotherapy.

Authors:  Michael G Jameson; Shivani Kumar; Shalini K Vinod; Peter E Metcalfe; Lois C Holloway
Journal:  Radiother Oncol       Date:  2014-05-19       Impact factor: 6.280

7.  Fast gradient-based algorithms for constrained total variation image denoising and deblurring problems.

Authors:  Amir Beck; Marc Teboulle
Journal:  IEEE Trans Image Process       Date:  2009-07-24       Impact factor: 10.856

8.  A comparative study of energy minimization methods for Markov random fields with smoothness-based priors.

Authors:  Richard Szeliski; Ramin Zabih; Daniel Scharstein; Olga Veksler; Vladimir Kolmogorov; Aseem Agarwala; Marshall Tappen; Carsten Rother
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2008-06       Impact factor: 6.226

9.  Multispectral analysis of magnetic resonance images.

Authors:  M W Vannier; R L Butterfield; D Jordan; W A Murphy; R G Levitt; M Gado
Journal:  Radiology       Date:  1985-01       Impact factor: 11.105

10.  Segmentation with area constraints.

Authors:  Marc Niethammer; Christopher Zach
Journal:  Med Image Anal       Date:  2012-09-28       Impact factor: 8.545

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  1 in total

1.  Confidence Calibration and Predictive Uncertainty Estimation for Deep Medical Image Segmentation.

Authors:  Alireza Mehrtash; William M Wells; Clare M Tempany; Purang Abolmaesumi; Tina Kapur
Journal:  IEEE Trans Med Imaging       Date:  2020-11-30       Impact factor: 10.048

  1 in total

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