Literature DB >> 17633686

Active mean fields: solving the mean field approximation in the level set framework.

Kilian M Pohl1, Ron Kikinis, William M Wells.   

Abstract

We describe a new approach for estimating the posterior probability of tissue labels. Conventional likelihood models are combined with a curve length prior on boundaries, and an approximate posterior distribution on labels is sought via the Mean Field approach. Optimizing the resulting estimator by gradient descent leads to a level set style algorithm where the level set functions are the logarithm-of-odds encoding of the posterior label probabilities in an unconstrained linear vector space. Applications with more than two labels are easily accommodated. The label assignment is accomplished by the Maximum A Posteriori rule, so there are no problems of "overlap" or "vacuum". We test the method on synthetic images with additive noise. In addition, we segment a magnetic resonance scan into the major brain compartments and subcortical structures.

Mesh:

Year:  2007        PMID: 17633686      PMCID: PMC3265334          DOI: 10.1007/978-3-540-73273-0_3

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  11 in total

1.  Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm.

Authors:  Y Zhang; M Brady; S Smith
Journal:  IEEE Trans Med Imaging       Date:  2001-01       Impact factor: 10.048

2.  Automated model-based tissue classification of MR images of the brain.

Authors:  K Van Leemput; F Maes; D Vandermeulen; P Suetens
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

3.  Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.

Authors:  Bruce Fischl; David H Salat; Evelina Busa; Marilyn Albert; Megan Dieterich; Christian Haselgrove; Andre van der Kouwe; Ron Killiany; David Kennedy; Shuna Klaveness; Albert Montillo; Nikos Makris; Bruce Rosen; Anders M Dale
Journal:  Neuron       Date:  2002-01-31       Impact factor: 17.173

4.  A shape-based approach to the segmentation of medical imagery using level sets.

Authors:  Andy Tsai; Anthony Yezzi; William Wells; Clare Tempany; Dewey Tucker; Ayres Fan; W Eric Grimson; Alan Willsky
Journal:  IEEE Trans Med Imaging       Date:  2003-02       Impact factor: 10.048

5.  Automatically parcellating the human cerebral cortex.

Authors:  Bruce Fischl; André van der Kouwe; Christophe Destrieux; Eric Halgren; Florent Ségonne; David H Salat; Evelina Busa; Larry J Seidman; Jill Goldstein; David Kennedy; Verne Caviness; Nikos Makris; Bruce Rosen; Anders M Dale
Journal:  Cereb Cortex       Date:  2004-01       Impact factor: 5.357

6.  An adaptive level set segmentation on a triangulated mesh.

Authors:  Meihe Xu; Paul M Thompson; Arthur W Toga
Journal:  IEEE Trans Med Imaging       Date:  2004-02       Impact factor: 10.048

7.  A Bayesian model for joint segmentation and registration.

Authors:  Kilian M Pohl; John Fisher; W Eric L Grimson; Ron Kikinis; William M Wells
Journal:  Neuroimage       Date:  2006-02-07       Impact factor: 6.556

8.  User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability.

Authors:  Paul A Yushkevich; Joseph Piven; Heather Cody Hazlett; Rachel Gimpel Smith; Sean Ho; James C Gee; Guido Gerig
Journal:  Neuroimage       Date:  2006-03-20       Impact factor: 6.556

9.  A geometric snake model for segmentation of medical imagery.

Authors:  A Yezzi; S Kichenassamy; A Kumar; P Olver; A Tannenbaum
Journal:  IEEE Trans Med Imaging       Date:  1997-04       Impact factor: 10.048

10.  Logarithm odds maps for shape representation.

Authors:  Kilian M Pohl; John Fisher; Martha Shenton; Robert W McCarley; W Eric L Grimson; Ron Kikinis; William M Wells
Journal:  Med Image Comput Comput Assist Interv       Date:  2006
View more
  9 in total

1.  A Multiple Geometric Deformable Model Framework for Homeomorphic 3D Medical Image Segmentation.

Authors:  Xian Fan; Pierre-Louis Bazin; John Bogovic; Ying Bai; Jerry L Prince
Journal:  Conf Comput Vis Pattern Recognit Workshops       Date:  2008-07-15

2.  Segmentation of image ensembles via latent atlases.

Authors:  Tammy Riklin-Raviv; Koen Van Leemput; Bjoern H Menze; William M Wells; Polina Golland
Journal:  Med Image Anal       Date:  2010-06-04       Impact factor: 8.545

3.  Validation of a fully automated 3D hippocampal segmentation method using subjects with Alzheimer's disease mild cognitive impairment, and elderly controls.

Authors:  Jonathan H Morra; Zhuowen Tu; Liana G Apostolova; Amity E Green; Christina Avedissian; Sarah K Madsen; Neelroop Parikshak; Xue Hua; Arthur W Toga; Clifford R Jack; Michael W Weiner; Paul M Thompson
Journal:  Neuroimage       Date:  2008-07-16       Impact factor: 6.556

4.  An Optimal, Generative Model for Estimating Multi-Label Probabilistic Maps.

Authors:  Praful Agrawal; Ross T Whitaker; Shireen Y Elhabian
Journal:  IEEE Trans Med Imaging       Date:  2020-01-23       Impact factor: 10.048

5.  A Multi-Compartment Segmentation Framework With Homeomorphic Level Sets.

Authors:  Xian Fan; Pierre-Louis Bazin; Jerry L Prince
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2008

6.  OPTIMAL PARAMETER MAP ESTIMATION FOR SHAPE REPRESENTATION: A GENERATIVE APPROACH.

Authors:  Shireen Y Elhabian; Praful Agrawal; Ross T Whitaker
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2016-06-16

7.  A Multiple Object Geometric Deformable Model for Image Segmentation.

Authors:  John A Bogovic; Jerry L Prince; Pierre-Louis Bazin
Journal:  Comput Vis Image Underst       Date:  2013-02-01       Impact factor: 3.876

8.  ACTIVE MEAN FIELDS FOR PROBABILISTIC IMAGE SEGMENTATION: CONNECTIONS WITH CHAN-VESE AND RUDIN-OSHER-FATEMI MODELS.

Authors:  Marc Niethammer; Kilian M Pohl; Firdaus Janoos; William M Wells
Journal:  SIAM J Imaging Sci       Date:  2017-07-27       Impact factor: 2.867

9.  A hybrid geometric-statistical deformable model for automated 3-D segmentation in brain MRI.

Authors:  Albert Huang; Rafeef Abugharbieh; Roger Tam
Journal:  IEEE Trans Biomed Eng       Date:  2009-03-27       Impact factor: 4.538

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.