Literature DB >> 29051686

THE ROLE OF THE ASYMMETRIC BOLAAMPHIPHILIC CHARACTER OF VECAR ON THE KINETIC AND STRUCTURAL ASPECTS OF ITS SELF-ASSEMBLY: A MOLECULAR DYNAMICS SIMULATION STUDY.

Hye-Young Kim1, Brian R Novak2,3, Bijay Shrestha1, S Emma Lee4, Dorel Moldovan2,3.   

Abstract

VECAR are novel bolaamphiphilic molecules consisting of two hydrophilic molecular groups, a carnosine derivative and a chromanol group, covalently linked by a hydrophobic alkyl spacer of varying length. Despite the potential for application in various biomedical applications VECAR properties, including their bulk properties, are still largely unknown. The early stage of the self-assembly process of VECAR molecules in water is studied using molecular dynamics simulations. The study reveals that the length of the hydrophobic spacer in VECAR affects the aggregation kinetics as well as the size, shape, density, and atomistic structure of the self-assembled aggregates. A mechanism based on cooperative interactions between water, the hydrophilic hydroxyl group, and the hydrophobic benzene ring of the chromanol head is proposed to explain the ordered packings of chromanols in the self-assembled aggregate structures at the aggregate-water interface.

Entities:  

Keywords:  aromatic stacking; bolaamphiphile; carnosine; chromanol; micelle

Year:  2017        PMID: 29051686      PMCID: PMC5642949          DOI: 10.1016/j.colsurfa.2017.03.060

Source DB:  PubMed          Journal:  Colloids Surf A Physicochem Eng Asp        ISSN: 0927-7757            Impact factor:   4.539


  15 in total

1.  Interfacial assembly of a series of cinnamoyl-containing bolaamphiphiles: spacer-controlled packing, photochemistry, and odd-even effect.

Authors:  Xufei Liu; Tianyu Wang; Minghua Liu
Journal:  Langmuir       Date:  2012-02-09       Impact factor: 3.882

Review 2.  Mechanisms of amyloid fibril self-assembly and inhibition. Model short peptides as a key research tool.

Authors:  Ehud Gazit
Journal:  FEBS J       Date:  2005-12       Impact factor: 5.542

3.  Validation of the 53A6 GROMOS force field.

Authors:  Chris Oostenbrink; Thereza A Soares; Nico F A van der Vegt; Wilfred F van Gunsteren
Journal:  Eur Biophys J       Date:  2005-04-01       Impact factor: 1.733

4.  Canonical sampling through velocity rescaling.

Authors:  Giovanni Bussi; Davide Donadio; Michele Parrinello
Journal:  J Chem Phys       Date:  2007-01-07       Impact factor: 3.488

5.  Phase diagram for assembly of biologically-active peptide amphiphiles.

Authors:  Stefan Tsonchev; Krista L Niece; George C Schatz; Mark A Ratner; Samuel I Stupp
Journal:  J Phys Chem B       Date:  2007-12-19       Impact factor: 2.991

6.  VMD: visual molecular dynamics.

Authors:  W Humphrey; A Dalke; K Schulten
Journal:  J Mol Graph       Date:  1996-02

7.  Molecular containers assembled through the hydrophobic effect.

Authors:  Jacobs H Jordan; Bruce C Gibb
Journal:  Chem Soc Rev       Date:  2015-01-21       Impact factor: 54.564

8.  Structure of Bolaamphiphile Sophorolipid Micelles Characterized with SAXS, SANS, and MD Simulations.

Authors:  Sabine Manet; Anne-Sophie Cuvier; Claire Valotteau; Giulia C Fadda; Javier Perez; Esra Karakas; Stéphane Abel; Niki Baccile
Journal:  J Phys Chem B       Date:  2015-10-02       Impact factor: 2.991

9.  Molecular dynamics studies of the size, shape, and internal structure of 0% and 90% acetylated fifth-generation polyamidoamine dendrimers in water and methanol.

Authors:  Hwankyu Lee; James R Baker; Ronald G Larson
Journal:  J Phys Chem B       Date:  2006-03-09       Impact factor: 2.991

10.  Initial stages of aggregation in aqueous solutions of ionic liquids: molecular dynamics studies.

Authors:  B L Bhargava; Michael L Klein
Journal:  J Phys Chem B       Date:  2009-07-16       Impact factor: 2.991

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