Literature DB >> 29039940

NosN, a Radical S-Adenosylmethionine Methylase, Catalyzes Both C1 Transfer and Formation of the Ester Linkage of the Side-Ring System during the Biosynthesis of Nosiheptide.

Joseph W LaMattina1, Bo Wang1, Edward D Badding1, Lauren K Gadsby1, Tyler L Grove1, Squire J Booker1.   

Abstract

Nosiheptide, a member of the e series of macrocyclic thiopeptide natural products, contains a side-ring system composed of a 3,4-dimethylindolic acid (DMIA) moiety connected to Glu6 and Cys8 of the thiopeptide backbone via ester and thioester linkages, respectively. Herein, we show that NosN, a predicted class C radical S-adenosylmethionine (SAM) methylase, catalyzes both the transfer of a C1 unit from SAM to 3-methylindolic acid linked to Cys8 of a synthetic substrate surrogate as well as the formation of the ester linkage between Glu6 and the nascent C4 methylene moiety of DMIA. In contrast to previous studies that indicated that 5'-methylthioadenosine is the immediate methyl donor in the reaction, in our studies, SAM itself plays this role, giving rise to S-adenosylhomocysteine as a coproduct of the reaction.

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Year:  2017        PMID: 29039940      PMCID: PMC5938625          DOI: 10.1021/jacs.7b08492

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  14 in total

1.  Kinetic aspects of regulation of metabolic processes. The hysteretic enzyme concept.

Authors:  C Frieden
Journal:  J Biol Chem       Date:  1970-11-10       Impact factor: 5.157

2.  Nosiheptide, a sulfur-containing peptide antibiotic isolated from Streptomyces actuosus 40037.

Authors:  F Benazet; M Cartier; J Florent; C Godard; G Jung; J Lunel; D Mancy; C Pascal; J Renaut; P Tarridec; J Theilleux; R Tissier; M Dubost; L Ninet
Journal:  Experientia       Date:  1980-04-15

3.  Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods.

Authors:  H J Sofia; G Chen; B G Hetzler; J F Reyes-Spindola; N E Miller
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

4.  The Catalytic Mechanism of the Class C Radical S-Adenosylmethionine Methyltransferase NosN.

Authors:  Wei Ding; Yongzhen Li; Junfeng Zhao; Xinjian Ji; Tianlu Mo; Haocheng Qianzhu; Tao Tu; Zixin Deng; Yi Yu; Fener Chen; Qi Zhang
Journal:  Angew Chem Int Ed Engl       Date:  2017-01-23       Impact factor: 15.336

5.  RlmN and AtsB as models for the overproduction and characterization of radical SAM proteins.

Authors:  Nicholas D Lanz; Tyler L Grove; Camelia Baleanu Gogonea; Kyung-Hoon Lee; Carsten Krebs; Squire J Booker
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600

Review 6.  Biomimetic Thioesters as Probes for Enzymatic Assembly Lines: Synthesis, Applications, and Challenges.

Authors:  Jakob Franke; Christian Hertweck
Journal:  Cell Chem Biol       Date:  2016-09-29       Impact factor: 8.116

7.  Mechanistic and functional versatility of radical SAM enzymes.

Authors:  Squire J Booker; Tyler L Grove
Journal:  F1000 Biol Rep       Date:  2010-07-14

8.  Nosiheptide biosynthesis featuring a unique indole side ring formation on the characteristic thiopeptide framework.

Authors:  Yi Yu; Lian Duan; Qi Zhang; Rijing Liao; Ying Ding; Haixue Pan; Evelyn Wendt-Pienkowski; Gongli Tang; Ben Shen; Wen Liu
Journal:  ACS Chem Biol       Date:  2009-10-16       Impact factor: 5.100

9.  Radical-mediated enzymatic carbon chain fragmentation-recombination.

Authors:  Qi Zhang; Yuxue Li; Dandan Chen; Yi Yu; Lian Duan; Ben Shen; Wen Liu
Journal:  Nat Chem Biol       Date:  2011-01-16       Impact factor: 15.040

10.  Biosynthesis of the nosiheptide indole side ring centers on a cryptic carrier protein NosJ.

Authors:  Wei Ding; Wenjuan Ji; Yujie Wu; Runze Wu; Wan-Qiu Liu; Tianlu Mo; Junfeng Zhao; Xiaoyan Ma; Wei Zhang; Ping Xu; Zixin Deng; Boping Tang; Yi Yu; Qi Zhang
Journal:  Nat Commun       Date:  2017-09-05       Impact factor: 14.919

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  13 in total

1.  Methanogenesis marker protein 10 (Mmp10) from Methanosarcina acetivorans is a radical S-adenosylmethionine methylase that unexpectedly requires cobalamin.

Authors:  Matthew I Radle; Danielle V Miller; Tatiana N Laremore; Squire J Booker
Journal:  J Biol Chem       Date:  2019-05-20       Impact factor: 5.157

2.  Enhanced Solubilization of Class B Radical S-Adenosylmethionine Methylases by Improved Cobalamin Uptake in Escherichia coli.

Authors:  Nicholas D Lanz; Anthony J Blaszczyk; Erin L McCarthy; Bo Wang; Roy X Wang; Brianne S Jones; Squire J Booker
Journal:  Biochemistry       Date:  2018-02-19       Impact factor: 3.162

Review 3.  Thiopeptides: antibiotics with unique chemical structures and diverse biological activities.

Authors:  Derek C K Chan; Lori L Burrows
Journal:  J Antibiot (Tokyo)       Date:  2020-12-21       Impact factor: 2.649

4.  Capturing Intermediates in the Reaction Catalyzed by NosN, a Class C Radical S-Adenosylmethionine Methylase Involved in the Biosynthesis of the Nosiheptide Side-Ring System.

Authors:  Bo Wang; Joseph W LaMattina; Savannah L Marshall; Squire J Booker
Journal:  J Am Chem Soc       Date:  2019-04-01       Impact factor: 15.419

Review 5.  Making and breaking carbon-carbon bonds in class C radical SAM methyltransferases.

Authors:  Marley A Brimberry; Liju Mathew; William Lanzilotta
Journal:  J Inorg Biochem       Date:  2021-10-22       Impact factor: 4.155

6.  Investigation of Substrate Recognition and Biosynthesis in Class IV Lanthipeptide Systems.

Authors:  Julian D Hegemann; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2018-04-19       Impact factor: 15.419

7.  New Insight into the Mechanism of Anaerobic Heme Degradation.

Authors:  Liju G Mathew; Nathaniel R Beattie; Clayton Pritchett; William N Lanzilotta
Journal:  Biochemistry       Date:  2019-11-07       Impact factor: 3.162

8.  The hidden enzymology of bacterial natural product biosynthesis.

Authors:  Thomas A Scott; Jörn Piel
Journal:  Nat Rev Chem       Date:  2019-06-12       Impact factor: 34.035

Review 9.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

10.  Mechanism of a Class C Radical S-Adenosyl-l-methionine Thiazole Methyl Transferase.

Authors:  Zhengan Zhang; Nilkamal Mahanta; Graham A Hudson; Douglas A Mitchell; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2017-12-15       Impact factor: 15.419

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