Literature DB >> 29038281

Putative Integrative Mobile Elements That Exploit the Xer Recombination Machinery Carrying blaIMI-Type Carbapenemase Genes in Enterobacter cloacae Complex Isolates in Singapore.

Tse H Koh1, Nurdyana Binte Abdul Rahman2, Jeanette W P Teo3, My-Van La4, Balamurugan Periaswamy5, Swaine L Chen5,6.   

Abstract

Whole-genome sequencing was performed on 16 isolates of the carbapenemase-producing Enterobacter cloacae complex to determine the flanking regions of blaIMI-type genes. Phylogenetic analysis of multilocus sequence typing (MLST) targets separated the isolates into 4 clusters. The blaIMI-type genes were all found on Xer-dependent integrative mobile elements (IMEX). The IMEX elements of 5 isolates were similar to those described in Canada, while the remainder were novel. Five isolates had IMEX elements lacking a resolvase and recombinase.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  antimicrobial resistance; carbapenemase; mobile genetic elements

Mesh：

Substances：

Year:  2017        PMID： 29038281      PMCID： PMC5740307          DOI： 10.1128/AAC.01542-17

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN： 0066-4804            Impact factor:   5.191


  8 in total

1.  SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.

Authors:  Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A Gurevich; Mikhail Dvorkin; Alexander S Kulikov; Valery M Lesin; Sergey I Nikolenko; Son Pham; Andrey D Prjibelski; Alexey V Pyshkin; Alexander V Sirotkin; Nikolay Vyahhi; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
Journal:  J Comput Biol       Date:  2012-04-16       Impact factor: 1.479

2.  Using the Velvet de novo assembler for short-read sequencing technologies.

Authors:  Daniel R Zerbino
Journal:  Curr Protoc Bioinformatics       Date:  2010-09

3.  Characterization of a Novel Putative Xer-Dependent Integrative Mobile Element Carrying the bla(NMC-A) Carbapenemase Gene, Inserted into the Chromosome of Members of the Enterobacter cloacae Complex.

Authors:  Alberto Antonelli; Marco Maria D'Andrea; Vincenzo Di Pilato; Bruno Viaggi; Francesca Torricelli; Gian Maria Rossolini
Journal:  Antimicrob Agents Chemother       Date:  2015-07-27       Impact factor: 5.191

4.  Characterization of IMI-1 beta-lactamase, a class A carbapenem-hydrolyzing enzyme from Enterobacter cloacae.

Authors:  B A Rasmussen; K Bush; D Keeney; Y Yang; R Hare; C O'Gara; A A Medeiros
Journal:  Antimicrob Agents Chemother       Date:  1996-09       Impact factor: 5.191

5.  Enterobacter cloacae Complex Isolates Harboring blaNMC-A or blaIMI-Type Class A Carbapenemase Genes on Novel Chromosomal Integrative Elements and Plasmids.

Authors:  David A Boyd; Laura F Mataseje; Ross Davidson; Johannes A Delport; Jeff Fuller; Linda Hoang; Brigitte Lefebvre; Paul N Levett; Diane L Roscoe; Barbara M Willey; Michael R Mulvey
Journal:  Antimicrob Agents Chemother       Date:  2017-04-24       Impact factor: 5.191

6.  BIGSdb: Scalable analysis of bacterial genome variation at the population level.

Authors:  Keith A Jolley; Martin C J Maiden
Journal:  BMC Bioinformatics       Date:  2010-12-10       Impact factor: 3.169

7.  SRST2: Rapid genomic surveillance for public health and hospital microbiology labs.

Authors:  Michael Inouye; Harriet Dashnow; Lesley-Ann Raven; Mark B Schultz; Bernard J Pope; Takehiro Tomita; Justin Zobel; Kathryn E Holt
Journal:  Genome Med       Date:  2014-11-20       Impact factor: 11.117

8.  The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).

Authors:  Ross Overbeek; Robert Olson; Gordon D Pusch; Gary J Olsen; James J Davis; Terry Disz; Robert A Edwards; Svetlana Gerdes; Bruce Parrello; Maulik Shukla; Veronika Vonstein; Alice R Wattam; Fangfang Xia; Rick Stevens
Journal:  Nucleic Acids Res       Date:  2013-11-29       Impact factor: 16.971
  8 in total
  7 in total

Review 1.  Mobile Genetic Elements Associated with Antimicrobial Resistance.

Authors:  Sally R Partridge; Stephen M Kwong; Neville Firth; Slade O Jensen
Journal:  Clin Microbiol Rev       Date:  2018-08-01       Impact factor: 26.132

2.  Enterobacter cloacae Complex Isolated from Shrimps from Vietnam Carrying blaIMI-1 Resistant to Carbapenems but Not Cephalosporins.

Authors:  Michael S M Brouwer; Michel Rapallini; Yvon Geurts; Frank Harders; Alex Bossers; Dik J Mevius; Ben Wit; Kees T Veldman
Journal:  Antimicrob Agents Chemother       Date:  2018-06-26       Impact factor: 5.191

3.  Carbapenemase-Producing Gram-Negative Bacteria from American Crows in the United States.

Authors:  Iva Kutilova; Adam Valcek; Costas C Papagiannitsis; Darina Cejkova; Martina Masarikova; Veronika Paskova; Lenka Davidova-Gerzova; Petra Videnska; Jaroslav Hrabak; Ivan Literak; Monika Dolejska
Journal:  Antimicrob Agents Chemother       Date:  2020-12-16       Impact factor: 5.191

Review 4.  Mutations Associated with Pyrazinamide Resistance in Mycobacterium tuberculosis: A Review and Update.

Authors:  Ananthi Rajendran; Kannan Palaniyandi
Journal:  Curr Microbiol       Date:  2022-10-08       Impact factor: 2.343

5.  Genomic Study of bla IMI-Positive Enterobacter cloacae Complex in Singapore over a Five-Year Study Period.

Authors:  Sophie Octavia; Tse Hsien Koh; Oon Tek Ng; Kalisvar Marimuthu; Indumathi Venkatachalam; Raymond T P Lin; Jeanette W P Teo
Journal:  Antimicrob Agents Chemother       Date:  2020-07-22       Impact factor: 5.191

6.  Dissemination of carbapenemase-producing Enterobacteriaceae harbouring blaNDM or blaIMI in local market foods of Yangon, Myanmar.

Authors:  Yo Sugawara; Hideharu Hagiya; Yukihiro Akeda; Mya Mya Aye; Hpoo Pwint Myo Win; Noriko Sakamoto; Rathina Kumar Shanmugakani; Dan Takeuchi; Isao Nishi; Akiko Ueda; Moh Moh Htun; Kazunori Tomono; Shigeyuki Hamada
Journal:  Sci Rep       Date:  2019-10-08       Impact factor: 4.379

7.  The TLCΦ satellite phage harbors a Xer recombination activation factor.

Authors:  Caroline Midonet; Solange Miele; Evelyne Paly; Raphaël Guerois; François-Xavier Barre
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-16       Impact factor: 11.205
  7 in total

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