Literature DB >> 29032961

Optimal Quantification of Contact Inhibition in Cell Populations.

David J Warne1, Ruth E Baker2, Matthew J Simpson3.   

Abstract

Contact inhibition refers to a reduction in the rate of cell migration and/or cell proliferation in regions of high cell density. Under normal conditions, contact inhibition is associated with the proper functioning tissues, whereas abnormal regulation of contact inhibition is associated with pathological conditions, such as tumor spreading. Unfortunately, standard mathematical modeling practices mask the importance of parameters that control contact inhibition through scaling arguments. Furthermore, standard experimental protocols are insufficient to quantify the effects of contact inhibition because they focus on data describing early time, low-density dynamics only. Here we use the logistic growth equation as a caricature model of contact inhibition to make recommendations as to how to best mitigate these issues. Taking a Bayesian approach, we quantify the trade off between different features of experimental design and estimates of parameter uncertainty so that we can reformulate a standard cell proliferation assay to provide estimates of both the low-density intrinsic growth rate, λ, and the carrying capacity density, K, which is a measure of contact inhibition.
Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 29032961      PMCID: PMC5685786          DOI: 10.1016/j.bpj.2017.09.016

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  25 in total

1.  Analysis of logistic growth models.

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Review 5.  Contact inhibition in tissue culture.

Authors:  M Abercrombie
Journal:  In Vitro       Date:  1970 Sep-Oct

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7.  A Bayesian approach to targeted experiment design.

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Review 10.  Modeling Melanoma In Vitro and In Vivo.

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  9 in total

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3.  Identifying density-dependent interactions in collective cell behaviour.

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Review 6.  Parameter estimation and uncertainty quantification using information geometry.

Authors:  Jesse A Sharp; Alexander P Browning; Kevin Burrage; Matthew J Simpson
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8.  Autocrine signaling can explain the emergence of Allee effects in cancer cell populations.

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Journal:  PLoS Comput Biol       Date:  2022-03-03       Impact factor: 4.475

9.  Three-dimensional experiments and individual based simulations show that cell proliferation drives melanoma nest formation in human skin tissue.

Authors:  Parvathi Haridas; Alexander P Browning; Jacqui A McGovern; D L Sean McElwain; Matthew J Simpson
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  9 in total

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