Literature DB >> 35472269

Parameter estimation and uncertainty quantification using information geometry.

Jesse A Sharp1,2, Alexander P Browning1,2, Kevin Burrage1,2,3, Matthew J Simpson1,4.   

Abstract

In this work, we: (i) review likelihood-based inference for parameter estimation and the construction of confidence regions; and (ii) explore the use of techniques from information geometry, including geodesic curves and Riemann scalar curvature, to supplement typical techniques for uncertainty quantification, such as Bayesian methods, profile likelihood, asymptotic analysis and bootstrapping. These techniques from information geometry provide data-independent insights into uncertainty and identifiability, and can be used to inform data collection decisions. All code used in this work to implement the inference and information geometry techniques is available on GitHub.

Entities:  

Keywords:  epidemic models; inference; likelihood; logistic growth; population models

Mesh:

Year:  2022        PMID: 35472269      PMCID: PMC9042578          DOI: 10.1098/rsif.2021.0940

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.293


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