Literature DB >> 28990338

Minor Structural Variations of Small Molecules Tune Regulatory Activities toward Pathological Factors in Alzheimer's Disease.

Michael W Beck1,2, Jeffrey S Derrick1, Jong-Min Suh1, Mingeun Kim1, Kyle J Korshavn2, Richard A Kerr2, Woo Jong Cho3, Scott D Larsen4, Brandon T Ruotolo2, Ayyalusamy Ramamoorthy2,5, Mi Hee Lim1.   

Abstract

Chemical tools have been valuable for establishing a better understanding of the relationships between metal ion dyshomeostasis, the abnormal aggregation and accumulation of amyloid-β (Aβ), and oxidative stress in Alzheimer's disease (AD). Still, very little information is available to correlate the structures of chemical tools with specific reactivities used to uncover such relationships. Recently, slight structural variations to the framework of a chemical tool were found to drastically determine the tool's reactivities toward multiple pathological facets to various extents. Herein, we report our rational design and characterization of a structural series to illustrate the extent to which the reactivities of small molecules vary toward different targets as a result of minor structural modifications. These compounds were rationally and systematically modified based on consideration of properties, including ionization potentials and metal binding, to afford their desired reactivities with metal-free or metal-bound Aβ, reactive oxygen species (ROS), and free organic radicals. Our results show that although small molecules are structurally similar, they can interact with multiple factors associated with AD pathogenesis and alleviate their reactivities to different degrees. Together, our studies demonstrate the rational structure-directed design that can be used to develop chemical tools capable of regulating individual or interrelated pathological features in AD.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  amyloid-β; free radicals; metal ions; small molecules; structure-activity relationships

Mesh:

Substances:

Year:  2017        PMID: 28990338      PMCID: PMC5828035          DOI: 10.1002/cmdc.201700456

Source DB:  PubMed          Journal:  ChemMedChem        ISSN: 1860-7179            Impact factor:   3.466


  37 in total

Review 1.  Metallostasis in Alzheimer's disease.

Authors:  Scott Ayton; Peng Lei; Ashley I Bush
Journal:  Free Radic Biol Med       Date:  2012-11-09       Impact factor: 7.376

Review 2.  Bioinorganic chemistry of Alzheimer's disease.

Authors:  Kasper P Kepp
Journal:  Chem Rev       Date:  2012-07-13       Impact factor: 60.622

Review 3.  The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics.

Authors:  Francesco Lanucara; Stephen W Holman; Christopher J Gray; Claire E Eyers
Journal:  Nat Chem       Date:  2014-04       Impact factor: 24.427

4.  Design of small molecules that target metal-A{beta} species and regulate metal-induced A{beta} aggregation and neurotoxicity.

Authors:  Jung-Suk Choi; Joseph J Braymer; Ravi P R Nanga; Ayyalusamy Ramamoorthy; Mi Hee Lim
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-03       Impact factor: 11.205

5.  Amyloid-β protein oligomerization and the importance of tetramers and dodecamers in the aetiology of Alzheimer's disease.

Authors:  Summer L Bernstein; Nicholas F Dupuis; Noel D Lazo; Thomas Wyttenbach; Margaret M Condron; Gal Bitan; David B Teplow; Joan-Emma Shea; Brandon T Ruotolo; Carol V Robinson; Michael T Bowers
Journal:  Nat Chem       Date:  2009-07       Impact factor: 24.427

6.  A Redox-Active, Compact Molecule for Cross-Linking Amyloidogenic Peptides into Nontoxic, Off-Pathway Aggregates: In Vitro and In Vivo Efficacy and Molecular Mechanisms.

Authors:  Jeffrey S Derrick; Richard A Kerr; Younwoo Nam; Shin Bi Oh; Hyuck Jin Lee; Kaylin G Earnest; Nayoung Suh; Kristy L Peck; Mehmet Ozbil; Kyle J Korshavn; Ayyalusamy Ramamoorthy; Rajeev Prabhakar; Edward J Merino; Jason Shearer; Joo-Yong Lee; Brandon T Ruotolo; Mi Hee Lim
Journal:  J Am Chem Soc       Date:  2015-11-17       Impact factor: 15.419

Review 7.  Bioinorganic chemistry of copper and zinc ions coordinated to amyloid-beta peptide.

Authors:  Peter Faller; Christelle Hureau
Journal:  Dalton Trans       Date:  2008-11-26       Impact factor: 4.390

Review 8.  Untangling amyloid-β, tau, and metals in Alzheimer's disease.

Authors:  Masha G Savelieff; Sanghyun Lee; Yuzhong Liu; Mi Hee Lim
Journal:  ACS Chem Biol       Date:  2013-03-18       Impact factor: 5.100

Review 9.  Neurodegenerative diseases and oxidative stress.

Authors:  Kevin J Barnham; Colin L Masters; Ashley I Bush
Journal:  Nat Rev Drug Discov       Date:  2004-03       Impact factor: 84.694

Review 10.  Two decades of studying non-covalent biomolecular assemblies by means of electrospray ionization mass spectrometry.

Authors:  Gillian R Hilton; Justin L P Benesch
Journal:  J R Soc Interface       Date:  2012-02-07       Impact factor: 4.118

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  2 in total

1.  New amyloid beta-disaggregating agents: synthesis, pharmacological evaluation, crystal structure and molecular docking of N-(4-((7-chloroquinolin-4-yl)oxy)-3-ethoxybenzyl)amines.

Authors:  Tarana Umar; Shruti Shalini; Md Kausar Raza; Siddharth Gusain; Jitendra Kumar; Waqar Ahmed; Manisha Tiwari; Nasimul Hoda
Journal:  Medchemcomm       Date:  2018-08-20       Impact factor: 3.597

2.  Excited-State Intramolecular Hydrogen Transfer of Compact Molecules Controls Amyloid Aggregation Profiles.

Authors:  Mannkyu Hong; Mingeun Kim; Jiwon Yoon; Seung-Hee Lee; Mu-Hyun Baik; Mi Hee Lim
Journal:  JACS Au       Date:  2022-08-11
  2 in total

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