Literature DB >> 26575890

A Redox-Active, Compact Molecule for Cross-Linking Amyloidogenic Peptides into Nontoxic, Off-Pathway Aggregates: In Vitro and In Vivo Efficacy and Molecular Mechanisms.

Jeffrey S Derrick1, Richard A Kerr2, Younwoo Nam1, Shin Bi Oh3, Hyuck Jin Lee1,2, Kaylin G Earnest4, Nayoung Suh3, Kristy L Peck5, Mehmet Ozbil6, Kyle J Korshavn2, Ayyalusamy Ramamoorthy2,7, Rajeev Prabhakar6, Edward J Merino4, Jason Shearer5, Joo-Yong Lee3,8, Brandon T Ruotolo2, Mi Hee Lim1.   

Abstract

Chemical reagents targeting and controlling amyloidogenic peptides have received much attention for helping identify their roles in the pathogenesis of protein-misfolding disorders. Herein, we report a novel strategy for redirecting amyloidogenic peptides into nontoxic, off-pathway aggregates, which utilizes redox properties of a small molecule (DMPD, N,N-dimethyl-p-phenylenediamine) to trigger covalent adduct formation with the peptide. In addition, for the first time, biochemical, biophysical, and molecular dynamics simulation studies have been performed to demonstrate a mechanistic understanding for such an interaction between a small molecule (DMPD) and amyloid-β (Aβ) and its subsequent anti-amyloidogenic activity, which, upon its transformation, generates ligand-peptide adducts via primary amine-dependent intramolecular cross-linking correlated with structural compaction. Furthermore, in vivo efficacy of DMPD toward amyloid pathology and cognitive impairment was evaluated employing 5xFAD mice of Alzheimer's disease (AD). Such a small molecule (DMPD) is indicated to noticeably reduce the overall cerebral amyloid load of soluble Aβ forms and amyloid deposits as well as significantly improve cognitive defects in the AD mouse model. Overall, our in vitro and in vivo studies of DMPD toward Aβ with the first molecular-level mechanistic investigations present the feasibility of developing new, innovative approaches that employ redox-active compounds without the structural complexity as next-generation chemical tools for amyloid management.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 26575890      PMCID: PMC4758209          DOI: 10.1021/jacs.5b10043

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  50 in total

1.  Naturally secreted oligomers of amyloid beta protein potently inhibit hippocampal long-term potentiation in vivo.

Authors:  Dominic M Walsh; Igor Klyubin; Julia V Fadeeva; William K Cullen; Roger Anwyl; Michael S Wolfe; Michael J Rowan; Dennis J Selkoe
Journal:  Nature       Date:  2002-04-04       Impact factor: 49.962

2.  Models@Home: distributed computing in bioinformatics using a screensaver based approach.

Authors:  Elmar Krieger; Gert Vriend
Journal:  Bioinformatics       Date:  2002-02       Impact factor: 6.937

3.  Common structure of soluble amyloid oligomers implies common mechanism of pathogenesis.

Authors:  Rakez Kayed; Elizabeth Head; Jennifer L Thompson; Theresa M McIntire; Saskia C Milton; Carl W Cotman; Charles G Glabe
Journal:  Science       Date:  2003-04-18       Impact factor: 47.728

4.  A biomolecular force field based on the free enthalpy of hydration and solvation: the GROMOS force-field parameter sets 53A5 and 53A6.

Authors:  Chris Oostenbrink; Alessandra Villa; Alan E Mark; Wilfred F van Gunsteren
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

5.  GROMACS: fast, flexible, and free.

Authors:  David Van Der Spoel; Erik Lindahl; Berk Hess; Gerrit Groenhof; Alan E Mark; Herman J C Berendsen
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

6.  Inhibition of alpha-synuclein fibrillization by dopamine analogs via reaction with the amino groups of alpha-synuclein. Implication for dopaminergic neurodegeneration.

Authors:  Hong-Tao Li; Dong-Hai Lin; Xiao-Ying Luo; Feng Zhang; Li-Na Ji; Hai-Ning Du; Guo-Qiang Song; Jun Hu; Jia-Wei Zhou; Hong-Yu Hu
Journal:  FEBS J       Date:  2005-07       Impact factor: 5.542

7.  N-Terminal deletions modify the Cu2+ binding site in amyloid-beta.

Authors:  Jesse W Karr; Henrietta Akintoye; Lauren J Kaupp; Veronika A Szalai
Journal:  Biochemistry       Date:  2005-04-12       Impact factor: 3.162

Review 8.  When quinones meet amino acids: chemical, physical and biological consequences.

Authors:  S Bittner
Journal:  Amino Acids       Date:  2006-04-13       Impact factor: 3.520

9.  Amyloid-beta binds Cu2+ in a mononuclear metal ion binding site.

Authors:  Jesse W Karr; Lauren J Kaupp; Veronika A Szalai
Journal:  J Am Chem Soc       Date:  2004-10-20       Impact factor: 15.419

Review 10.  Neurodegenerative diseases and oxidative stress.

Authors:  Kevin J Barnham; Colin L Masters; Ashley I Bush
Journal:  Nat Rev Drug Discov       Date:  2004-03       Impact factor: 84.694

View more
  15 in total

Review 1.  Biomineralized hybrid nanoparticles for imaging and therapy of cancers.

Authors:  Kyung Hyun Min; Hong Jae Lee; Sang Cheon Lee; Kyeongsoon Park
Journal:  Quant Imaging Med Surg       Date:  2018-08

2.  Mechanistic approaches for chemically modifying the coordination sphere of copper-amyloid-β complexes.

Authors:  Jiyeon Han; Hyuck Jin Lee; Kyu Yeon Kim; Geewoo Nam; Junghyun Chae; Mi Hee Lim
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-26       Impact factor: 11.205

3.  Structural and Mechanistic Insights into Development of Chemical Tools to Control Individual and Inter-Related Pathological Features in Alzheimer's Disease.

Authors:  Hyuck Jin Lee; Kyle J Korshavn; Younwoo Nam; Juhye Kang; Thomas J Paul; Richard A Kerr; Il Seung Youn; Mehmet Ozbil; Kwang S Kim; Brandon T Ruotolo; Rajeev Prabhakar; Ayyalusamy Ramamoorthy; Mi Hee Lim
Journal:  Chemistry       Date:  2017-01-26       Impact factor: 5.236

4.  N,N'-Diacetyl-p-phenylenediamine restores microglial phagocytosis and improves cognitive defects in Alzheimer's disease transgenic mice.

Authors:  Min Hee Park; Misun Lee; Geewoo Nam; Mingeun Kim; Juhye Kang; Byung Jo Choi; Min Seock Jeong; Kang Ho Park; Wan Hui Han; Eunyoung Tak; Min Sun Kim; Juri Lee; Yuxi Lin; Young-Ho Lee; Im-Sook Song; Min-Koo Choi; Joo-Yong Lee; Hee Kyung Jin; Jae-Sung Bae; Mi Hee Lim
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-04       Impact factor: 11.205

5.  An Iridium(III) Complex as a Photoactivatable Tool for Oxidation of Amyloidogenic Peptides with Subsequent Modulation of Peptide Aggregation.

Authors:  Juhye Kang; Shin Jung C Lee; Jung Seung Nam; Hyuck Jin Lee; Myeong-Gyun Kang; Kyle J Korshavn; Hyun-Tak Kim; Jaeheung Cho; Ayyalusamy Ramamoorthy; Hyun-Woo Rhee; Tae-Hyuk Kwon; Mi Hee Lim
Journal:  Chemistry       Date:  2017-01-03       Impact factor: 5.236

Review 6.  Amyloid β structural polymorphism, associated toxicity and therapeutic strategies.

Authors:  Ofek Oren; Ran Taube; Niv Papo
Journal:  Cell Mol Life Sci       Date:  2021-10-13       Impact factor: 9.261

7.  Clusterin Binding Modulates the Aggregation and Neurotoxicity of Amyloid-β(1-42).

Authors:  Yun-Mi Kim; SuJi Park; Su Yeon Choi; Shin Bi Oh; MinKyo Jung; Chan-Gi Pack; Jung Jin Hwang; Eunyoung Tak; Joo-Yong Lee
Journal:  Mol Neurobiol       Date:  2022-07-29       Impact factor: 5.682

8.  Porphyrin-Based Tumor-Targeting Theranostic Agent: Gd-TDAP.

Authors:  Soyeon Kim; Ji-Ung Yang; Jae Hun Ahn; In Ok Ko; Jung Young Kim; Yong Jin Lee; Ji-Ae Park
Journal:  ACS Med Chem Lett       Date:  2021-08-13       Impact factor: 4.632

9.  Minor Structural Variations of Small Molecules Tune Regulatory Activities toward Pathological Factors in Alzheimer's Disease.

Authors:  Michael W Beck; Jeffrey S Derrick; Jong-Min Suh; Mingeun Kim; Kyle J Korshavn; Richard A Kerr; Woo Jong Cho; Scott D Larsen; Brandon T Ruotolo; Ayyalusamy Ramamoorthy; Mi Hee Lim
Journal:  ChemMedChem       Date:  2017-10-09       Impact factor: 3.466

10.  Expression of N-Terminal Cysteine Aβ42 and Conjugation to Generate Fluorescent and Biotinylated Aβ42.

Authors:  Sheng Zhang; Gretchen Guaglianone; Michael A Morris; Stan Yoo; William J Howitz; Li Xing; Jian-Guo Zheng; Hannah Jusuf; Grace Huizar; Jonathan Lin; Adam G Kreutzer; James S Nowick
Journal:  Biochemistry       Date:  2021-04-01       Impact factor: 3.321

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.