Literature DB >> 28986451

Impact of Selection Bias on Estimation of Subsequent Event Risk.

Yi-Juan Hu1, Amand F Schmidt2, Frank Dudbridge2, Michael V Holmes2, James M Brophy2, Vinicius Tragante2, Ziyi Li2, Peizhou Liao2, Arshed A Quyyumi2, Raymond O McCubrey2, Benjamin D Horne2, Aroon D Hingorani2, Folkert W Asselbergs2, Riyaz S Patel2, Qi Long2.   

Abstract

BACKGROUND: Studies of recurrent or subsequent disease events may be susceptible to bias caused by selection of subjects who both experience and survive the primary indexing event. Currently, the magnitude of any selection bias, particularly for subsequent time-to-event analysis in genetic association studies, is unknown. METHODS AND
RESULTS: We used empirically inspired simulation studies to explore the impact of selection bias on the marginal hazard ratio for risk of subsequent events among those with established coronary heart disease. The extent of selection bias was determined by the magnitudes of genetic and nongenetic effects on the indexing (first) coronary heart disease event. Unless the genetic hazard ratio was unrealistically large (>1.6 per allele) and assuming the sum of all nongenetic hazard ratios was <10, bias was usually <10% (downward toward the null). Despite the low bias, the probability that a confidence interval included the true effect decreased (undercoverage) with increasing sample size because of increasing precision. Importantly, false-positive rates were not affected by selection bias.
CONCLUSIONS: In most empirical settings, selection bias is expected to have a limited impact on genetic effect estimates of subsequent event risk. Nevertheless, because of undercoverage increasing with sample size, most confidence intervals will be over precise (not wide enough). When there is no effect modification by history of coronary heart disease, the false-positive rates of association tests will be close to nominal.
© 2017 American Heart Association, Inc.

Entities:  

Keywords:  alleles; confidence intervals; genetic association studies; risk; sample size; selection bias

Mesh:

Year:  2017        PMID: 28986451      PMCID: PMC5659743          DOI: 10.1161/CIRCGENETICS.116.001616

Source DB:  PubMed          Journal:  Circ Cardiovasc Genet        ISSN: 1942-3268


  21 in total

1.  A structural approach to selection bias.

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2.  Nonparametric covariate adjustment in estimating hazard ratios.

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3.  Heart disease and stroke statistics--2015 update: a report from the American Heart Association.

Authors:  Dariush Mozaffarian; Emelia J Benjamin; Alan S Go; Donna K Arnett; Michael J Blaha; Mary Cushman; Sarah de Ferranti; Jean-Pierre Després; Heather J Fullerton; Virginia J Howard; Mark D Huffman; Suzanne E Judd; Brett M Kissela; Daniel T Lackland; Judith H Lichtman; Lynda D Lisabeth; Simin Liu; Rachel H Mackey; David B Matchar; Darren K McGuire; Emile R Mohler; Claudia S Moy; Paul Muntner; Michael E Mussolino; Khurram Nasir; Robert W Neumar; Graham Nichol; Latha Palaniappan; Dilip K Pandey; Mathew J Reeves; Carlos J Rodriguez; Paul D Sorlie; Joel Stein; Amytis Towfighi; Tanya N Turan; Salim S Virani; Joshua Z Willey; Daniel Woo; Robert W Yeh; Melanie B Turner
Journal:  Circulation       Date:  2014-12-17       Impact factor: 29.690

4.  Index event bias-a numerical example.

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5.  Does selection bias explain the obesity paradox among individuals with cardiovascular disease?

Authors:  Hailey R Banack; Jay S Kaufman
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6.  A nearly unavoidable mechanism for collider bias with index-event studies.

Authors:  W Dana Flanders; Ronald C Eldridge; William McClellan
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7.  The GENIUS-CHD consortium.

Authors:  Riyaz S Patel; Folkert W Asselbergs
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8.  A comprehensive 1,000 Genomes-based genome-wide association meta-analysis of coronary artery disease.

Authors:  Majid Nikpay; Anuj Goel; Hong-Hee Won; Leanne M Hall; Christina Willenborg; Stavroula Kanoni; Danish Saleheen; Theodosios Kyriakou; Christopher P Nelson; Jemma C Hopewell; Thomas R Webb; Lingyao Zeng; Abbas Dehghan; Maris Alver; Sebastian M Armasu; Kirsi Auro; Andrew Bjonnes; Daniel I Chasman; Shufeng Chen; Ian Ford; Nora Franceschini; Christian Gieger; Christopher Grace; Stefan Gustafsson; Jie Huang; Shih-Jen Hwang; Yun Kyoung Kim; Marcus E Kleber; King Wai Lau; Xiangfeng Lu; Yingchang Lu; Leo-Pekka Lyytikäinen; Evelin Mihailov; Alanna C Morrison; Natalia Pervjakova; Liming Qu; Lynda M Rose; Elias Salfati; Richa Saxena; Markus Scholz; Albert V Smith; Emmi Tikkanen; Andre Uitterlinden; Xueli Yang; Weihua Zhang; Wei Zhao; Mariza de Andrade; Paul S de Vries; Natalie R van Zuydam; Sonia S Anand; Lars Bertram; Frank Beutner; George Dedoussis; Philippe Frossard; Dominique Gauguier; Alison H Goodall; Omri Gottesman; Marc Haber; Bok-Ghee Han; Jianfeng Huang; Shapour Jalilzadeh; Thorsten Kessler; Inke R König; Lars Lannfelt; Wolfgang Lieb; Lars Lind; Cecilia M Lindgren; Marja-Liisa Lokki; Patrik K Magnusson; Nadeem H Mallick; Narinder Mehra; Thomas Meitinger; Fazal-Ur-Rehman Memon; Andrew P Morris; Markku S Nieminen; Nancy L Pedersen; Annette Peters; Loukianos S Rallidis; Asif Rasheed; Maria Samuel; Svati H Shah; Juha Sinisalo; Kathleen E Stirrups; Stella Trompet; Laiyuan Wang; Khan S Zaman; Diego Ardissino; Eric Boerwinkle; Ingrid B Borecki; Erwin P Bottinger; Julie E Buring; John C Chambers; Rory Collins; L Adrienne Cupples; John Danesh; Ilja Demuth; Roberto Elosua; Stephen E Epstein; Tõnu Esko; Mary F Feitosa; Oscar H Franco; Maria Grazia Franzosi; Christopher B Granger; Dongfeng Gu; Vilmundur Gudnason; Alistair S Hall; Anders Hamsten; Tamara B Harris; Stanley L Hazen; Christian Hengstenberg; Albert Hofman; Erik Ingelsson; Carlos Iribarren; J Wouter Jukema; Pekka J Karhunen; Bong-Jo Kim; Jaspal S Kooner; Iftikhar J Kullo; Terho Lehtimäki; Ruth J F Loos; Olle Melander; Andres Metspalu; Winfried März; Colin N Palmer; Markus Perola; Thomas Quertermous; Daniel J Rader; Paul M Ridker; Samuli Ripatti; Robert Roberts; Veikko Salomaa; Dharambir K Sanghera; Stephen M Schwartz; Udo Seedorf; Alexandre F Stewart; David J Stott; Joachim Thiery; Pierre A Zalloua; Christopher J O'Donnell; Muredach P Reilly; Themistocles L Assimes; John R Thompson; Jeanette Erdmann; Robert Clarke; Hugh Watkins; Sekar Kathiresan; Ruth McPherson; Panos Deloukas; Heribert Schunkert; Nilesh J Samani; Martin Farrall
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9.  Collider Bias Is Only a Partial Explanation for the Obesity Paradox.

Authors:  Matthew Sperrin; Jane Candlish; Ellena Badrick; Andrew Renehan; Iain Buchan
Journal:  Epidemiology       Date:  2016-07       Impact factor: 4.822

10.  Case-Only Survival Analysis Reveals Unique Effects of Genotype, Sex, and Coronary Disease Severity on Survivorship.

Authors:  Jennifer R Dungan; Xuejun Qin; Benjamin D Horne; John F Carlquist; Abanish Singh; Melissa Hurdle; Elizabeth Grass; Carol Haynes; Simon G Gregory; Svati H Shah; Elizabeth R Hauser; William E Kraus
Journal:  PLoS One       Date:  2016-05-17       Impact factor: 3.240

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  14 in total

1.  Predictive Accuracy of a Polygenic Risk Score-Enhanced Prediction Model vs a Clinical Risk Score for Coronary Artery Disease.

Authors:  Joshua Elliott; Barbara Bodinier; Tom A Bond; Marc Chadeau-Hyam; Evangelos Evangelou; Karel G M Moons; Abbas Dehghan; David C Muller; Paul Elliott; Ioanna Tzoulaki
Journal:  JAMA       Date:  2020-02-18       Impact factor: 56.272

2.  Adjustment for index event bias in genome-wide association studies of subsequent events.

Authors:  Frank Dudbridge; Richard J Allen; Nuala A Sheehan; A Floriaan Schmidt; James C Lee; R Gisli Jenkins; Louise V Wain; Aroon D Hingorani; Riyaz S Patel
Journal:  Nat Commun       Date:  2019-04-05       Impact factor: 14.919

3.  Subsequent Event Risk in Individuals With Established Coronary Heart Disease.

Authors:  Riyaz S Patel; Vinicius Tragante; Amand F Schmidt; Raymond O McCubrey; Michael V Holmes; Laurence J Howe; Kenan Direk; Axel Åkerblom; Karin Leander; Salim S Virani; Karol A Kaminski; Jochen D Muehlschlegel; Hooman Allayee; Peter Almgren; Maris Alver; Ekaterina V Baranova; Hassan Behloui; Bram Boeckx; Peter S Braund; Lutz P Breitling; Graciela Delgado; Nubia E Duarte; Marie-Pierre Dubé; Line Dufresne; Niclas Eriksson; Luisa Foco; Markus Scholz; Crystel M Gijsberts; Charlotte Glinge; Yan Gong; Jaana Hartiala; Mahyar Heydarpour; Jaroslav A Hubacek; Marcus Kleber; Daniel Kofink; Salma Kotti; Pekka Kuukasjärvi; Vei-Vei Lee; Andreas Leiherer; Petra A Lenzini; Daniel Levin; Leo-Pekka Lyytikäinen; Nicola Martinelli; Ute Mons; Christopher P Nelson; Kjell Nikus; Anna P Pilbrow; Rafal Ploski; Yan V Sun; Michael W T Tanck; W H Wilson Tang; Stella Trompet; Sander W van der Laan; Jessica Van Setten; Ragnar O Vilmundarson; Chiara Viviani Anselmi; Efthymia Vlachopoulou; Lawien Al Ali; Eric Boerwinkle; Carlo Briguori; John F Carlquist; Kathryn F Carruthers; Gavino Casu; John Deanfield; Panos Deloukas; Frank Dudbridge; Thomas Engstrøm; Natalie Fitzpatrick; Kim Fox; Bruna Gigante; Stefan James; Marja-Liisa Lokki; Paulo A Lotufo; Nicola Marziliano; Ify R Mordi; Joseph B Muhlestein; Christopher Newton-Cheh; Jan Pitha; Christoph H Saely; Ayman Samman-Tahhan; Pratik B Sandesara; Andrej Teren; Adam Timmis; Frans Van de Werf; Els Wauters; Arthur A M Wilde; Ian Ford; David J Stott; Ale Algra; Maria G Andreassi; Diego Ardissino; Benoit J Arsenault; Christie M Ballantyne; Thomas O Bergmeijer; Connie R Bezzina; Simon C Body; Eric H Boersma; Peter Bogaty; Michiel L Bots; Hermann Brenner; Jasper J Brugts; Ralph Burkhardt; Clara Carpeggiani; Gianluigi Condorelli; Rhonda M Cooper-DeHoff; Sharon Cresci; Nicolas Danchin; Ulf de Faire; Robert N Doughty; Heinz Drexel; James C Engert; Keith A A Fox; Domenico Girelli; Diederick E Grobbee; Emil Hagström; Stanley L Hazen; Claes Held; Harry Hemingway; Imo E Hoefer; G Kees Hovingh; Reza Jabbari; Julie A Johnson; J Wouter Jukema; Marcin P Kaczor; Mika Kähönen; Jiri Kettner; Marek Kiliszek; Olaf H Klungel; Bo Lagerqvist; Diether Lambrechts; Jari O Laurikka; Terho Lehtimäki; Daniel Lindholm; B K Mahmoodi; Anke H Maitland-van der Zee; Ruth McPherson; Olle Melander; Andres Metspalu; Anna Niemcunowicz-Janica; Oliviero Olivieri; Grzegorz Opolski; Colin N Palmer; Gerard Pasterkamp; Carl J Pepine; Alexandre C Pereira; Louise Pilote; Arshed A Quyyumi; A Mark Richards; Marek Sanak; Agneta Siegbahn; Tabassome Simon; Juha Sinisalo; J Gustav Smith; John A Spertus; Steen Stender; Alexandre F R Stewart; Wojciech Szczeklik; Anna Szpakowicz; Jean-Claude Tardif; Jurriën M Ten Berg; Jacob Tfelt-Hansen; George Thanassoulis; Joachim Thiery; Christian Torp-Pedersen; Yolanda van der Graaf; Frank L J Visseren; Johannes Waltenberger; Peter E Weeke; Pim Van der Harst; Chim C Lang; Naveed Sattar; Vicky A Cameron; Jeffrey L Anderson; James M Brophy; Guillaume Pare; Benjamin D Horne; Winfried März; Lars Wallentin; Nilesh J Samani; Aroon D Hingorani; Folkert W Asselbergs
Journal:  Circ Genom Precis Med       Date:  2019-03-21

4.  Interleukin-6 Receptor Signaling and Abdominal Aortic Aneurysm Growth Rates.

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Journal:  Circ Genom Precis Med       Date:  2019-02

5.  Contextualizing selection bias in Mendelian randomization: how bad is it likely to be?

Authors:  Apostolos Gkatzionis; Stephen Burgess
Journal:  Int J Epidemiol       Date:  2019-06-01       Impact factor: 7.196

6.  Association of Chromosome 9p21 With Subsequent Coronary Heart Disease Events.

Authors:  Riyaz S Patel; Amand F Schmidt; Vinicius Tragante; Raymond O McCubrey; Michael V Holmes; Laurence J Howe; Kenan Direk; Axel Åkerblom; Karin Leander; Salim S Virani; Karol A Kaminski; Jochen D Muehlschlegel; Marie-Pierre Dubé; Hooman Allayee; Peter Almgren; Maris Alver; Ekaterina V Baranova; Hassan Behlouli; Bram Boeckx; Peter S Braund; Lutz P Breitling; Graciela Delgado; Nubia E Duarte; Line Dufresne; Niclas Eriksson; Luisa Foco; Crystel M Gijsberts; Yan Gong; Jaana Hartiala; Mahyar Heydarpour; Jaroslav A Hubacek; Marcus Kleber; Daniel Kofink; Pekka Kuukasjärvi; Vei-Vei Lee; Andreas Leiherer; Petra A Lenzini; Daniel Levin; Leo-Pekka Lyytikäinen; Nicola Martinelli; Ute Mons; Christopher P Nelson; Kjell Nikus; Anna P Pilbrow; Rafal Ploski; Yan V Sun; Michael W T Tanck; W H Wilson Tang; Stella Trompet; Sander W van der Laan; Jessica van Setten; Ragnar O Vilmundarson; Chiara Viviani Anselmi; Efthymia Vlachopoulou; Eric Boerwinkle; Carlo Briguori; John F Carlquist; Kathryn F Carruthers; Gavino Casu; John Deanfield; Panos Deloukas; Frank Dudbridge; Natalie Fitzpatrick; Bruna Gigante; Stefan James; Marja-Liisa Lokki; Paulo A Lotufo; Nicola Marziliano; Ify R Mordi; Joseph B Muhlestein; Chris Newton Cheh; Jan Pitha; Christoph H Saely; Ayman Samman-Tahhan; Pratik B Sandesara; Andrej Teren; Adam Timmis; Frans Van de Werf; Els Wauters; Arthur A M Wilde; Ian Ford; David J Stott; Ale Algra; Maria G Andreassi; Diego Ardissino; Benoit J Arsenault; Christie M Ballantyne; Thomas O Bergmeijer; Connie R Bezzina; Simon C Body; Peter Bogaty; Gert J de Borst; Hermann Brenner; Ralph Burkhardt; Clara Carpeggiani; Gianluigi Condorelli; Rhonda M Cooper-DeHoff; Sharon Cresci; Ulf de Faire; Robert N Doughty; Heinz Drexel; James C Engert; Keith A A Fox; Domenico Girelli; Emil Hagström; Stanley L Hazen; Claes Held; Harry Hemingway; Imo E Hoefer; G Kees Hovingh; Julie A Johnson; Pim A de Jong; J Wouter Jukema; Marcin P Kaczor; Mika Kähönen; Jiri Kettner; Marek Kiliszek; Olaf H Klungel; Bo Lagerqvist; Diether Lambrechts; Jari O Laurikka; Terho Lehtimäki; Daniel Lindholm; Bakhtawar K Mahmoodi; Anke H Maitland-van der Zee; Ruth McPherson; Olle Melander; Andres Metspalu; Witold Pepinski; Oliviero Olivieri; Grzegorz Opolski; Colin N Palmer; Gerard Pasterkamp; Carl J Pepine; Alexandre C Pereira; Louise Pilote; Arshed A Quyyumi; A Mark Richards; Marek Sanak; Markus Scholz; Agneta Siegbahn; Juha Sinisalo; J Gustav Smith; John A Spertus; Alexandre F R Stewart; Wojciech Szczeklik; Anna Szpakowicz; Jurriën M Ten Berg; George Thanassoulis; Joachim Thiery; Yolanda van der Graaf; Frank L J Visseren; Johannes Waltenberger; Pim Van der Harst; Jean-Claude Tardif; Naveed Sattar; Chim C Lang; Guillaume Pare; James M Brophy; Jeffrey L Anderson; Winfried März; Lars Wallentin; Vicky A Cameron; Benjamin D Horne; Nilesh J Samani; Aroon D Hingorani; Folkert W Asselbergs
Journal:  Circ Genom Precis Med       Date:  2019-03-21

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Authors:  Lars Wallentin; Folkert W Asselbergs; Riyaz S Patel; Bakhtawar K Mahmoodi; Vinicius Tragante; Marcus E Kleber; Michael V Holmes; Amand F Schmidt; Raymond O McCubrey; Laurence J Howe; Kenan Direk; Hooman Allayee; Ekaterina V Baranova; Peter S Braund; Graciela E Delgado; Niclas Eriksson; Crystel M Gijsberts; Yan Gong; Jaana Hartiala; Mahyar Heydarpour; Gerard Pasterkamp; Salma Kotti; Pekka Kuukasjärvi; Petra A Lenzini; Daniel Levin; Leo-Pekka Lyytikäinen; Jochen D Muehlschlegel; Christopher P Nelson; Kjell Nikus; Anna P Pilbrow; W H Wilson Tang; Sander W van der Laan; Jessica van Setten; Ragnar O Vilmundarson; John Deanfield; Panos Deloukas; Frank Dudbridge; Stefan James; Ify R Mordi; Andrej Teren; Thomas O Bergmeijer; Simon C Body; Michiel Bots; Ralph Burkhardt; Rhonda M Cooper-DeHoff; Sharon Cresci; Nicolas Danchin; Robert N Doughty; Diederick E Grobbee; Emil Hagström; Stanley L Hazen; Claes Held; Imo E Hoefer; G Kees Hovingh; Julie A Johnson; Marcin P Kaczor; Mika Kähönen; Olaf H Klungel; Jari O Laurikka; Terho Lehtimäki; Anke H Maitland-van der Zee; Ruth McPherson; Colin N Palmer; Adriaan O Kraaijeveld; Carl J Pepine; Marek Sanak; Naveed Sattar; Markus Scholz; Tabassome Simon; John A Spertus; Alexandre F R Stewart; Wojciech Szczeklik; Joachim Thiery; Frank L J Visseren; Johannes Waltenberger; A Mark Richards; Chim C Lang; Vicky A Cameron; Axel Åkerblom; Guillaume Pare; Winfried März; Nilesh J Samani; Aroon D Hingorani; Jurriën M Ten Berg
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8.  Survival Bias in Mendelian Randomization Studies: A Threat to Causal Inference.

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9.  Genome-Wide Variants Associated With Longitudinal Survival Outcomes Among Individuals With Coronary Artery Disease.

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Journal:  Front Genet       Date:  2021-06-01       Impact factor: 4.599

10.  Polygenic risk scores for coronary artery disease and subsequent event risk amongst established cases.

Authors:  Laurence J Howe; Frank Dudbridge; Amand F Schmidt; Chris Finan; Spiros Denaxas; Folkert W Asselbergs; Aroon D Hingorani; Riyaz S Patel
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