| Literature DB >> 32219344 |
Laurence J Howe1, Frank Dudbridge2, Amand F Schmidt1,3, Chris Finan1, Spiros Denaxas1, Folkert W Asselbergs1,3, Aroon D Hingorani1, Riyaz S Patel1.
Abstract
BACKGROUND: There is growing evidence that polygenic risk scores (PRSs) can identify individuals with elevated lifetime risk of coronary artery disease (CAD). Whether they can also be used to stratify the risk of subsequent events among those surviving a first CAD event remain uncertain, with possible biological differences between CAD onset and progression, and the potential for index event bias.Entities:
Mesh:
Year: 2020 PMID: 32219344 PMCID: PMC7254844 DOI: 10.1093/hmg/ddaa052
Source DB: PubMed Journal: Hum Mol Genet ISSN: 0964-6906 Impact factor: 6.150
Figure 1A directed acyclic graph displaying an index event CAD status, with two risk factors: increased age and CAD PRS. The dotted line between Age and CAD PRS indicates that when conditioning on the index event, associations are likely to be induced between the two risk factors. For example, if an individual develops CAD at the age of 20, this suggests that they are likely to have a high CAD PRS.
Figure 2Associations between a CAD PRS and incident MI, CAD death and ischaemic stroke in prevalent CAD cases and in individuals free of CAD at baseline. Note that these three outcomes were chosen based on strength of evidence for heterogeneity between the case/CAD free individuals.
Associations between CAD PRS and incident events
| Outcome | No CAD at baseline ( | Prevalent CAD cases ( | Heterogeneity |
|---|---|---|---|
| CAD death/MI | 1.33 (1.29, 1.38) | 1.11 (1.03, 1.20) | 1.4 × 10−5 |
| CV death | 1.20 (1.14, 1.26) | 0.97 (0.87, 1.09) | 0.0012 |
| All-cause death | 1.01 (0.99, 1.03) | 0.91 (0.85, 0.98) | 0.0041 |
| CAD death | 1.31 (1.23, 1.40) | 0.96 (0.85, 1.08) | 9.1 × 10−6 |
| MI | 1.34 (1.29, 1.38) | 1.15 (1.06, 1.25) | 0.0012 |
| Revasc | 0.99 (0.97, 1.01) | 0.91 (0.84, 1.00) | 0.067 |
| Heart failure | 1.00 (0.93, 1.08) | 0.97 (0.86, 1.10) | 0.67 |
| Stroke | 1.05 (1.01, 1.09) | 0.88 (0.78, 1.00) | 0.0094 |
| Ischaemic stroke | 1.09 (1.04, 1.15) | 0.78 (0.67, 0.90) | 1.8 × 10−5 |
| All CVD | 1.06 (1.04, 1.08) | 0.99 (0.93, 1.04) | 0.013 |
aAll OR per 1 SD increase in CAD PRS of 182 SNPs.
Associations between CAD PRS and covariates
| Covariate | Values of covariates at quintiles of the CAD PRS distribution | Heterogeneity | ||||
|---|---|---|---|---|---|---|
| 20% | 40% | 60% | 80% | |||
| Age (years) | No CAD at baseline ( | 66.7 | 66.7 | 66.6 | 66.6 | 0.0064 |
| Prevalent CAD cases ( | 72.3 | 72.1 | 72.0 | 71.9 | ||
| Sex (male = 1, female = 0) | No CAD at baseline ( | 0.47 | 0.45 | 0.44 | 0.43 | 0.84 |
| Prevalent CAD cases ( | 0.82 | 0.80 | 0.79 | 0.77 | ||
| Statin use (Yes = 1 No = 0) | No CAD at baseline ( | 0.04 | 0.10 | 0.16 | 0.24 | 2.3 × 10−5 |
| Prevalent CAD cases ( | 0.67 | 0.81 | 0.93 | >1.0 | ||
| Type II diabetes (Yes = 1 No = 0) | No CAD at baseline ( | 0.03 | 0.04 | 0.05 | 0.05 | 0.053 |
| Prevalent CAD cases ( | 0.21 | 0.19 | 0.17 | 0.14 | ||
| SBP (mmHg) | No CAD at baseline ( | 139.4 | 139.7 | 139.9 | 140.2 | 0.020 |
| Prevalent CAD cases ( | 139.3 | 139.4 | 139.4 | 139.4 | ||
| BMI (kg/m2) | No CAD at baseline ( | 27.2 | 27.1 | 27.1 | 27.1 | 0.011 |
| Prevalent CAD cases ( | 29.1 | 29.0 | 28.9 | 28.9 | ||
| Smoking (Ever = 1 Never = 0) | No CAD at baseline ( | 0.45 | 0.44 | 0.44 | 0.44 | 0.11 |
| Prevalent CAD cases ( | 0.70 | 0.67 | 0.65 | 0.63 | ||
aTest for heterogeneity between regression estimates in prevalent case and control samples.
Figure 3Associations between a CAD PRS and 10 incident fatal/CV outcomes. One analysis (blue) only included age and sex as covariates, while the other analysis (red) included additional CAD risk factors as covariates (BMI, SBP, statins, type II diabetes and ever smoking status).