Literature DB >> 28982267

Institutional profile: translational pharmacogenomics at the Icahn School of Medicine at Mount Sinai.

Stuart A Scott1,2,3, Aniwaa Owusu Obeng3,4, Mariana R Botton1,2, Yao Yang1,2,5, Erick R Scott1,2,5, Stephen B Ellis3, Richard Wallsten2, Tom Kaszemacher3, Xiang Zhou1,2,5, Rong Chen1,2,5, Paola Nicoletti1,2, Hetanshi Naik1, Eimear E Kenny1,3,5, Aida Vega6, Eva Waite6, George A Diaz1,2, Joel Dudley1,5,7, Jonathan L Halperin8, Lisa Edelmann1,2, Andrew Kasarskis1,5, Jean-Sébastien Hulot9,10, Inga Peter1,3, Erwin P Bottinger3,11, Kurt Hirschhorn1, Pamela Sklar1,5,12, Judy H Cho1,3,13, Robert J Desnick1,2, Eric E Schadt1,2,5.   

Abstract

For almost 50 years, the Icahn School of Medicine at Mount Sinai has continually invested in genetics and genomics, facilitating a healthy ecosystem that provides widespread support for the ongoing programs in translational pharmacogenomics. These programs can be broadly cataloged into discovery, education, clinical implementation and testing, which are collaboratively accomplished by multiple departments, institutes, laboratories, companies and colleagues. Focus areas have included drug response association studies and allele discovery, multiethnic pharmacogenomics, personalized genotyping and survey-based education programs, pre-emptive clinical testing implementation and novel assay development. This overview summarizes the current state of translational pharmacogenomics at Mount Sinai, including a future outlook on the forthcoming expansions in overall support, research and clinical programs, genomic technology infrastructure and the participating faculty.

Keywords:  Icahn School of Medicine at Mount Sinai; clinical implementation; discovery; education; genetic testing; pharmacogenetics; pharmacogenomics

Mesh:

Year:  2017        PMID: 28982267      PMCID: PMC5694020          DOI: 10.2217/pgs-2017-0137

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  33 in total

1.  Combined CYP2C9, VKORC1 and CYP4F2 frequencies among racial and ethnic groups.

Authors:  Stuart A Scott; Rame Khasawneh; Inga Peter; Ruth Kornreich; Robert J Desnick
Journal:  Pharmacogenomics       Date:  2010-06       Impact factor: 2.533

2.  Polygenic overlap between schizophrenia risk and antipsychotic response: a genomic medicine approach.

Authors:  Douglas M Ruderfer; Alexander W Charney; Ben Readhead; Brian A Kidd; Anna K Kähler; Paul J Kenny; Michael J Keiser; Jennifer L Moran; Christina M Hultman; Stuart A Scott; Patrick F Sullivan; Shaun M Purcell; Joel T Dudley; Pamela Sklar
Journal:  Lancet Psychiatry       Date:  2016-02-23       Impact factor: 27.083

3.  Identification of CYP2C19*4B: pharmacogenetic implications for drug metabolism including clopidogrel responsiveness.

Authors:  S A Scott; S Martis; I Peter; Y Kasai; R Kornreich; R J Desnick
Journal:  Pharmacogenomics J       Date:  2011-03-01       Impact factor: 3.550

Review 4.  Integrative genomics strategies to elucidate the complexity of drug response.

Authors:  Andrew Kasarskis; Xia Yang; Eric Schadt
Journal:  Pharmacogenomics       Date:  2011-12       Impact factor: 2.533

5.  A pharmacogenetic versus a clinical algorithm for warfarin dosing.

Authors:  Stephen E Kimmel; Benjamin French; Scott E Kasner; Julie A Johnson; Jeffrey L Anderson; Brian F Gage; Yves D Rosenberg; Charles S Eby; Rosemary A Madigan; Robert B McBane; Sherif Z Abdel-Rahman; Scott M Stevens; Steven Yale; Emile R Mohler; Margaret C Fang; Vinay Shah; Richard B Horenstein; Nita A Limdi; James A S Muldowney; Jaspal Gujral; Patrice Delafontaine; Robert J Desnick; Thomas L Ortel; Henny H Billett; Robert C Pendleton; Nancy L Geller; Jonathan L Halperin; Samuel Z Goldhaber; Michael D Caldwell; Robert M Califf; Jonas H Ellenberg
Journal:  N Engl J Med       Date:  2013-11-19       Impact factor: 91.245

6.  Common variants associated with changes in levels of circulating free fatty acids after administration of glucose-insulin-potassium (GIK) therapy in the IMMEDIATE trial.

Authors:  K L Ellis; Y Zhou; L Rodriguez-Murillo; J R Beshansky; E Ainehsazan; H P Selker; G S Huggins; L A Cupples; I Peter
Journal:  Pharmacogenomics J       Date:  2015-12-08       Impact factor: 3.550

7.  Clinical Pharmacogenetics Implementation Consortium guidelines for CYP2C19 genotype and clopidogrel therapy: 2013 update.

Authors:  S A Scott; K Sangkuhl; C M Stein; J-S Hulot; J L Mega; D M Roden; T E Klein; M S Sabatine; J A Johnson; A R Shuldiner
Journal:  Clin Pharmacol Ther       Date:  2013-05-22       Impact factor: 6.875

8.  Exome sequencing of extreme clopidogrel response phenotypes identifies B4GALT2 as a determinant of on-treatment platelet reactivity.

Authors:  S A Scott; J-P Collet; U Baber; Y Yang; I Peter; M Linderman; J Sload; W Qiao; A S Kini; S K Sharma; R J Desnick; V Fuster; R J Hajjar; G Montalescot; J-S Hulot
Journal:  Clin Pharmacol Ther       Date:  2016-06-20       Impact factor: 6.875

9.  Warfarin pharmacogenetics: CYP2C9 and VKORC1 genotypes predict different sensitivity and resistance frequencies in the Ashkenazi and Sephardi Jewish populations.

Authors:  Stuart A Scott; Lisa Edelmann; Ruth Kornreich; Robert J Desnick
Journal:  Am J Hum Genet       Date:  2008-01-17       Impact factor: 11.025

10.  Design and anticipated outcomes of the eMERGE-PGx project: a multicenter pilot for preemptive pharmacogenomics in electronic health record systems.

Authors:  L J Rasmussen-Torvik; S C Stallings; A S Gordon; B Almoguera; M A Basford; S J Bielinski; A Brautbar; M H Brilliant; D S Carrell; J J Connolly; D R Crosslin; K F Doheny; C J Gallego; O Gottesman; D S Kim; K A Leppig; R Li; S Lin; S Manzi; A R Mejia; J A Pacheco; V Pan; J Pathak; C L Perry; J F Peterson; C A Prows; J Ralston; L V Rasmussen; M D Ritchie; S Sadhasivam; S A Scott; M Smith; A Vega; A A Vinks; S Volpi; W A Wolf; E Bottinger; R L Chisholm; C G Chute; J L Haines; J B Harley; B Keating; I A Holm; I J Kullo; G P Jarvik; E B Larson; T Manolio; C A McCarty; D A Nickerson; S E Scherer; M S Williams; D M Roden; J C Denny
Journal:  Clin Pharmacol Ther       Date:  2014-06-24       Impact factor: 6.875

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  11 in total

1.  Trait Insights Gained by Comparing Genome-Wide Association Study Results using Different Chronic Obstructive Pulmonary Disease Definitions.

Authors:  Jaehyun Joo; Brian D Hobbs; Michael H Cho; Blanca E Himes
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2020-05-30

2.  Pharmacy students' attitudes and perceptions toward pharmacogenomics education.

Authors:  Shanice Coriolan; Nimota Arikawe; Arden Moscati; Lisheng Zhou; Stephanie Dym; Seda Donmez; Adinoyi Garba; Sasha Falbaum; Zvi Loewy; Melinda Lull; Maha Saad; Jane Shtaynberg; Aniwaa Owusu Obeng
Journal:  Am J Health Syst Pharm       Date:  2019-05-17       Impact factor: 2.637

Review 3.  Physician preparedness for big genomic data: a review of genomic medicine education initiatives in the United States.

Authors:  Caryn Kseniya Rubanovich; Cynthia Cheung; Jess Mandel; Cinnamon S Bloss
Journal:  Hum Mol Genet       Date:  2018-08-01       Impact factor: 6.150

4.  Gene-Based Analysis Reveals Sex-Specific Genetic Risk Factors of COPD.

Authors:  Jaehyun Joo; Blanca Himes
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

Review 5.  Clinical implementation of drug metabolizing gene-based therapeutic interventions worldwide.

Authors:  Evangelia Eirini Tsermpini; Zeina N Al-Mahayri; Bassam R Ali; George P Patrinos
Journal:  Hum Genet       Date:  2021-10-01       Impact factor: 4.132

Review 6.  Advancing Pharmacogenomics from Single-Gene to Preemptive Testing.

Authors:  Cyrine E Haidar; Kristine R Crews; James M Hoffman; Mary V Relling; Kelly E Caudle
Journal:  Annu Rev Genomics Hum Genet       Date:  2022-05-10       Impact factor: 9.340

7.  Pharmacogenomic Approaches for Automated Medication Risk Assessment in People with Polypharmacy.

Authors:  Jiazhen Liu; Carol Friedman; Joseph Finkelstein
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2018-05-18

8.  Clinical implementation of pharmacogenomics via a health system-wide research biobank: the University of Colorado experience.

Authors:  Christina L Aquilante; David P Kao; Katy E Trinkley; Chen-Tan Lin; Kristy R Crooks; Emily C Hearst; Steven J Hess; Elizabeth L Kudron; Yee Ming Lee; Ina Liko; Jan Lowery; Rasika A Mathias; Andrew A Monte; Nicholas Rafaels; Matthew J Rioth; Emily R Roberts; Matthew Rg Taylor; Connie Williamson; Kathleen C Barnes
Journal:  Pharmacogenomics       Date:  2020-02-20       Impact factor: 2.533

9.  Implementing pharmacogenomics decision support across seven European countries: The Ubiquitous Pharmacogenomics (U-PGx) project.

Authors:  Kathrin Blagec; Rudolf Koopmann; Mandy Crommentuijn-van Rhenen; Inge Holsappel; Cathelijne H van der Wouden; Lidija Konta; Hong Xu; Daniela Steinberger; Enrico Just; Jesse J Swen; Henk-Jan Guchelaar; Matthias Samwald
Journal:  J Am Med Inform Assoc       Date:  2018-07-01       Impact factor: 4.497

10.  A Mixed-Methods Protocol to Identify Best Practices for Implementing Pharmacogenetic Testing in Clinical Settings.

Authors:  Nina R Sperber; Deborah Cragun; Megan C Roberts; Lisa M Bendz; Parker Ince; Sarah Gonzales; Susanne B Haga; R Ryanne Wu; Natasha J Petry; Laura Ramsey; Ryley Uber
Journal:  J Pers Med       Date:  2022-08-13
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