Literature DB >> 27213804

Exome sequencing of extreme clopidogrel response phenotypes identifies B4GALT2 as a determinant of on-treatment platelet reactivity.

S A Scott1, J-P Collet2, U Baber3, Y Yang1, I Peter1, M Linderman1,4, J Sload1, W Qiao1, A S Kini3, S K Sharma3, R J Desnick1, V Fuster5, R J Hajjar5, G Montalescot2, J-S Hulot2,5.   

Abstract

Interindividual variability in platelet aggregation is common among patients treated with clopidogrel and both high on-treatment platelet reactivity (HTPR) and low on-treatment platelet reactivity (LTPR) increase risks for adverse clinical outcomes. CYP2C19 influences clopidogrel response but only accounts for ∼12% of the variability in platelet reactivity. To identify novel variants implicated in on-treatment platelet reactivity, patients with coronary artery disease (CAD) with extreme pharmacodynamic responses to clopidogrel and wild-type CYP2C19 were subjected to exome sequencing. Candidate variants that clustered in the LTPR subgroup subsequently were genotyped across the discovery cohort (n = 636). Importantly, carriers of B4GALT2 c.909C>T had lower on-treatment P2Y12 reaction units (PRUs; P = 0.0077) and residual platelet aggregation (P = 0.0008) compared with noncarriers, which remained significant after adjusting for CYP2C19 and other clinical variables in both the discovery (P = 0.0298) and replication (n = 160; PRU: P = 0.0001) cohorts. B4GALT2 is a platelet-expressed galactosyltransferase, indicating that B4GALT2 c.909C>T may influence clopidogrel sensitivity through atypical cell-surface glycoprotein processing and platelet adhesion.
© 2016 American Society for Clinical Pharmacology and Therapeutics.

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Year:  2016        PMID: 27213804      PMCID: PMC4982803          DOI: 10.1002/cpt.401

Source DB:  PubMed          Journal:  Clin Pharmacol Ther        ISSN: 0009-9236            Impact factor:   6.875


  45 in total

1.  The effect of CYP2C19 polymorphism on the pharmacokinetics and pharmacodynamics of clopidogrel: a possible mechanism for clopidogrel resistance.

Authors:  K A Kim; P W Park; S J Hong; J-Y Park
Journal:  Clin Pharmacol Ther       Date:  2008-03-05       Impact factor: 6.875

2.  The CYP2C19*17 allele is associated with better platelet response to clopidogrel in patients admitted for non-ST acute coronary syndrome.

Authors:  C Frére; T Cuisset; B Gaborit; M-C Alessi; J-S Hulot
Journal:  J Thromb Haemost       Date:  2009-05-30       Impact factor: 5.824

3.  Variability in on-treatment platelet reactivity explained by CYP2C19*2 genotype is modest in clopidogrel pretreated patients undergoing coronary stenting.

Authors:  Heleen J Bouman; Ankie M Harmsze; Jochem W van Werkum; Nicoline J Breet; Th O Bergmeijer; Hugo Ten Cate; Christian M Hackeng; Vera H M Deneer; Jurriën M Ten Berg
Journal:  Heart       Date:  2011-05-31       Impact factor: 5.994

4.  A polymorphism in the VKORC1 regulator calumenin predicts higher warfarin dose requirements in African Americans.

Authors:  D Voora; D C Koboldt; C R King; P A Lenzini; C S Eby; R Porche-Sorbet; E Deych; M Crankshaw; P E Milligan; H L McLeod; S R Patel; L H Cavallari; P M Ridker; G R Grice; R D Miller; B F Gage
Journal:  Clin Pharmacol Ther       Date:  2010-03-03       Impact factor: 6.875

5.  Clopidogrel: a case for indication-specific pharmacogenetics.

Authors:  J A Johnson; D M Roden; L J Lesko; E Ashley; T E Klein; A R Shuldiner
Journal:  Clin Pharmacol Ther       Date:  2012-05       Impact factor: 6.875

6.  A risk score to predict bleeding in patients with acute coronary syndromes.

Authors:  Roxana Mehran; Stuart J Pocock; Eugenia Nikolsky; Tim Clayton; George D Dangas; Ajay J Kirtane; Helen Parise; Martin Fahy; Steven V Manoukian; Frederick Feit; Magnus E Ohman; Bernard Witzenbichler; Giulio Guagliumi; Alexandra J Lansky; Gregg W Stone
Journal:  J Am Coll Cardiol       Date:  2010-06-08       Impact factor: 24.094

7.  Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information.

Authors:  S M Hebsgaard; P G Korning; N Tolstrup; J Engelbrecht; P Rouzé; S Brunak
Journal:  Nucleic Acids Res       Date:  1996-09-01       Impact factor: 16.971

8.  Clinical implications of very low on-treatment platelet reactivity in patients treated with thienopyridine: the POBA study (predictor of bleedings with antiplatelet drugs).

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Journal:  JACC Cardiovasc Interv       Date:  2013-08       Impact factor: 11.195

9.  Cytochrome P450 2C19 polymorphism in young patients treated with clopidogrel after myocardial infarction: a cohort study.

Authors:  Jean-Philippe Collet; Jean-Sébastien Hulot; Anna Pena; Eric Villard; Jean-Baptiste Esteve; Johanne Silvain; Laurent Payot; Delphine Brugier; Guillaume Cayla; Farzin Beygui; Gilbert Bensimon; Christian Funck-Brentano; Gilles Montalescot
Journal:  Lancet       Date:  2008-12-26       Impact factor: 79.321

10.  Genetic variant in folate homeostasis is associated with lower warfarin dose in African Americans.

Authors:  Roxana Daneshjou; Eric R Gamazon; Ben Burkley; Larisa H Cavallari; Julie A Johnson; Teri E Klein; Nita Limdi; Sara Hillenmeyer; Bethany Percha; Konrad J Karczewski; Taimour Langaee; Shitalben R Patel; Carlos D Bustamante; Russ B Altman; Minoli A Perera
Journal:  Blood       Date:  2014-07-30       Impact factor: 22.113

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  12 in total

Review 1.  Genome-wide and candidate gene approaches of clopidogrel efficacy using pharmacodynamic and clinical end points-Rationale and design of the International Clopidogrel Pharmacogenomics Consortium (ICPC).

Authors:  Thomas O Bergmeijer; Jean-Luc Reny; Ruth E Pakyz; Li Gong; Joshua P Lewis; Eun-Young Kim; Daniel Aradi; Israel Fernandez-Cadenas; Richard B Horenstein; Ming Ta Michael Lee; Ryan M Whaley; Joan Montaner; Gian Franco Gensini; John H Cleator; Kiyuk Chang; Lene Holmvang; Willibald Hochholzer; Dan M Roden; Stefan Winter; Russ B Altman; Dimitrios Alexopoulos; Ho-Sook Kim; Jean-Pierre Déry; Meinrad Gawaz; Kevin Bliden; Marco Valgimigli; Rossella Marcucci; Gianluca Campo; Elke Schaeffeler; Nadia P Dridi; Ming-Shien Wen; Jae Gook Shin; Tabassome Simon; Pierre Fontana; Betti Giusti; Tobias Geisler; Michiaki Kubo; Dietmar Trenk; Jolanta M Siller-Matula; Jurriën M Ten Berg; Paul A Gurbel; Jean-Sebastien Hulot; Braxton D Mitchell; Matthias Schwab; Marylyn DeRiggi Ritchie; Teri E Klein; Alan R Shuldiner
Journal:  Am Heart J       Date:  2017-12-17       Impact factor: 4.749

Review 2.  Institutional profile: translational pharmacogenomics at the Icahn School of Medicine at Mount Sinai.

Authors:  Stuart A Scott; Aniwaa Owusu Obeng; Mariana R Botton; Yao Yang; Erick R Scott; Stephen B Ellis; Richard Wallsten; Tom Kaszemacher; Xiang Zhou; Rong Chen; Paola Nicoletti; Hetanshi Naik; Eimear E Kenny; Aida Vega; Eva Waite; George A Diaz; Joel Dudley; Jonathan L Halperin; Lisa Edelmann; Andrew Kasarskis; Jean-Sébastien Hulot; Inga Peter; Erwin P Bottinger; Kurt Hirschhorn; Pamela Sklar; Judy H Cho; Robert J Desnick; Eric E Schadt
Journal:  Pharmacogenomics       Date:  2017-10-06       Impact factor: 2.533

Review 3.  Potential Usefulness of Clopidogrel Pharmacogenetics in Cerebral Endovascular Procedures and Carotid Artery Stenting.

Authors:  Jorge Duconge; Dagmar F Hernandez-Suarez
Journal:  Curr Clin Pharmacol       Date:  2017

4.  Identification of a Genomic Region between SLC29A1 and HSP90AB1 Associated with Risk of Bevacizumab-Induced Hypertension: CALGB 80405 (Alliance).

Authors:  Megan Li; Flora Mulkey; Chen Jiang; Bert H O'Neil; Bryan P Schneider; Fei Shen; Paula N Friedman; Yukihide Momozawa; Michiaki Kubo; Donna Niedzwiecki; Howard S Hochster; Heinz-Josef Lenz; James N Atkins; Hope S Rugo; Susan Halabi; William Kevin Kelly; Howard L McLeod; Federico Innocenti; Mark J Ratain; Alan P Venook; Kouros Owzar; Deanna L Kroetz
Journal:  Clin Cancer Res       Date:  2018-06-05       Impact factor: 12.531

5.  Prevalence of pharmacogenomic variants affecting the efficacy of clopidogrel therapy in the Hispanic Community Health Study/Study of Latinos cohort.

Authors:  Kyle Melin; Jee-Young Moon; Qibin Qi; Dagmar F Hernandez-Suarez; Jorge Duconge; Simin Hua; Sara Gonzalez; Donglin Zeng; Robert C Kaplan
Journal:  Pharmacogenomics       Date:  2018-12-06       Impact factor: 2.533

Review 6.  Pharmacogenomics in dermatology: tools for understanding gene-drug associations.

Authors:  Roxana Daneshjou; Rachel Huddart; Teri E Klein; Russ B Altman
Journal:  Semin Cutan Med Surg       Date:  2019-03-01

7.  Clinical determinants of clopidogrel responsiveness in a heterogeneous cohort of Puerto Rican Hispanics.

Authors:  Dagmar F Hernandez-Suarez; Stuart A Scott; Matthew I Tomey; Kyle Melin; Angel Lopez-Candales; Charlotte E Buckley; Jorge Duconge
Journal:  Ther Adv Cardiovasc Dis       Date:  2017-07-04

8.  Effect of cilostazol on platelet reactivity among patients with peripheral artery disease on clopidogrel therapy.

Authors:  Dagmar F Hernandez-Suarez; Hector Núñez-Medina; Stuart A Scott; Angel Lopez-Candales; Jose M Wiley; Mario J Garcia; Kyle Melin; Karid Nieves-Borrero; Christina Rodriguez-Ruiz; Lorraine Marshall; Jorge Duconge
Journal:  Drug Metab Pers Ther       Date:  2018-03-28

9.  Investigating Real-World Clopidogrel Pharmacogenetics in Stroke Using a Bioresource Linked to Electronic Medical Records.

Authors:  Aleksi Tornio; Rob Flynn; Steve Morant; Elena Velten; Colin N A Palmer; Thomas M MacDonald; Alex S F Doney
Journal:  Clin Pharmacol Ther       Date:  2017-09-19       Impact factor: 6.875

10.  Pharmacogenetic association study on clopidogrel response in Puerto Rican Hispanics with cardiovascular disease: a novel characterization of a Caribbean population.

Authors:  Dagmar F Hernandez-Suarez; Mariana R Botton; Stuart A Scott; Matthew I Tomey; Mario J Garcia; Jose Wiley; Pedro A Villablanca; Kyle Melin; Angel Lopez-Candales; Jessicca Y Renta; Jorge Duconge
Journal:  Pharmgenomics Pers Med       Date:  2018-06-08
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