| Literature DB >> 28957693 |
Shi-Fang Li1, Fu-Rong Zhao2, Jun-Jun Shao1, Yin-Li Xie1, Hui-Yun Chang3, Yong-Guang Zhang1.
Abstract
Since 1985, interferon (IFN)-ω, a type I IFN, has been identified in many animals, but not canines and mice. It has been demonstrated to have antiviral, anti-proliferation, and antitumor activities that are similar to those of IFN-α. To date, IFN-ω has been explored as a treatment option for some diseases or viral infections in humans and other animals. Studies have revealed that human IFN-ω displays antitumor activities in some models of human cancer cells and that it can be used to diagnose some diseases. While recombinant feline IFN-ω has been licensed in several countries for treating canine parvovirus, feline leukemia virus, and feline immunodeficiency virus infections, it also exhibits a certain efficacy when used to treat other viral infections or diseases. This review examines the known biological activity of IFN-ω and its clinical applications. We expect that the information provided in this review will stimulate further studies of IFN-ω as a therapeutic agent.Entities:
Keywords: Application; Biological activity; Interferon omega; Type I IFN
Mesh:
Substances:
Year: 2017 PMID: 28957693 PMCID: PMC7106160 DOI: 10.1016/j.intimp.2017.08.028
Source DB: PubMed Journal: Int Immunopharmacol ISSN: 1567-5769 Impact factor: 4.932
IFN-ω in different species and the characteristics of the IFN-ω gene and protein.
| Species | Location | Characteristics of the IFN-ω gene and protein | Reference |
|---|---|---|---|
| Human | Human chromosome 9 | Human IFN-ω has at least five members, but only one member of the human IFN-ω family is a functional gene that results in a functional and glycosylated protein. This protein has six additional amino acids located at its carboxyl-terminus (172 amino acid residues) and a single polypeptide chain comprising two disulfide bonds and an | |
| Cat | No data | Felines IFN-ω (FeIFN-ω) includes 13 subtypes that contain an amino-terminal secretory signal sequence from residues 1–23. The mature sequence of IFN-ω contains four highly conserved cysteines (positions 1, 29, 100, and 140) and seven prolines (four of those at positions 4, 26, 39, and 117 of the mature protein), while the FeIFN-ω protein has six additional amino acids at its carboxyl-terminus compared with FeIFN-α. Among these subtypes, FeIFN-ω2 and FeIFN-ω4 contain a seven-amino-acid insertion at position 109, and the insert location is comparable to that of the FeIFN-α, while it has higher antiviral activity than the other subtypes. Interestingly, different from that in other mammalian subtypes, these 13 subtypes do not have an | |
| Pig | Chromosome 1 | Porcine IFN-ω (PoIFN-ω) contains seven or eight members with variable open reading frame lengths. The most extensive similarity of the PoIFN-ω sequences are to bovine leukocyte IFN-ω, and the lowest one is to equine IFN-ω. It contains an IFabd functional domain, multiple putative binding sites for type I IFN receptor subunits, and one putative | |
| Horse | Chromosome 23 | Horse IFN-ω contains eight members plus four pseudogenes, which is a greater than the number of IFN-α genes and more diverse than the other type I IFN genes. The IFN-ω gene contains a putative glycosylation sequence, Asn-Thr-Thr, at positions 78–80. The IFN-ω protein has six alpha-helices and it contains IFabd (cd00095), interferon (pfam00143), and IFabd (smart00076) domains, and multiple putative binding sites for the type I IFN receptor subunit 1 and 2 and an | |
| Rabbit | No data | The rabbit IFN-ω family comprises at least eight genes that display the highest degree of homology with human IFN-ω and the lowest with murine IFN-αII. There are two IRF-1 binding sites at nucleotide positions 85 and 55, the hexamer repeat sequence 5′–GAAANN–3′ in the 5′ noncoding sequence, and a repetition of the 5′–TTATTTAT–3′ motif, which is similar to many 3′ downstream regions of genes encoding inflammatory cytokines. In addition, the immediate promoter region of the rabbit IFN-ω genes has a high proportion of purine residues. An ATG sequence, (5′–GAAATG–3′), was found only in the promoter region of RbIFNW48 at nucleotide position 66. Similarly, IFN-ω includes four Cys residues at amino acid positions 1, 29, 99, and 139. | |
| Cattle | Chromosome 8q15 | The IFN-ω family in cattle (BoIFN-ω) consists of 24 members that contain two pseudogenes and 22 functional genes. Among these subtypes, the nucleotide similarity is 91.3%–97.2%, and the amino acid identity is 84.4%–95.4%. Most of these subtypes encode 195 amino acids, expect BoIFN-ω7 and BoIFN-ω11, which lack nine amino acid residues at their carboxyl terminus. In addition, 23 of the members have signal peptides. A glycosylation site analysis revealed that BoIFN-ω 1, 2, 3, 4, 7, 9, 10, 11, 12, 13, 17, 20, 23 and 24 do not have a | |
| Serotine bat | No data | The serotine bat IFN-ω genes are intronless, and its open reading frame consists of 588 bp (encoding 195 amino acids), and | |
| Sheep | No data | Sheep IFN-ω concludes as least five members. All the putative IFN regulatory motifs found in the BoIFN-ω gene promoter are also conserved in the promoter region of the sheep gene, such as the three 5′–GAAANN–3′ motifs (− 51 to − 46, − 57 to − 52, and − 67 to − 62), which overlap two potential interferon regulatory factor-1 binding sites “8” (5′–AAATGA–3′, positions − 55 to − 50 and − 66 to − 61), and a fourth 5′–GAAANN–3′ hexamer (− 97 to − 92) which overlaps a third less conserved interferon regulatory factor-1 site in the sheep clone (5′–AACTGA–3′, positions − 101 to − 96). |