Literature DB >> 28956107

[Establishment of a living biobank : Improved guidance of precision cancer care with in vitro and in vivo cancer models].

C Pauli1,2, H Moch3, M A Rubin4,5.   

Abstract

BACKGROUND: Precision oncology is a clinical approach aimed towards tailoring treatment strategies for patients based on the genetic profile of each patient's cancer. The integration of a living biobank, consisting of patient-derived tumor organoids and PDXs, with next generation sequencing approaches and high-throughput drug screening help to guide clinical decision-making and clinical trial development.
METHODS: Tumor organoids derived from fresh tumor samples were used for in vitro and in vivo high-throughput drug testing.
RESULTS: Over a period of two years we established 56 in vitro tumor organoids and 19 in vivo xenografts from 18 different solid tumor types. Tumor morphology and molecular profiles show good concordance between the in vitro and in vivo models compared to their native tumor. High-throughput drug screening (up to 160 drugs) has been tested on eight tumor organoid lines. Seven of them underwent an additional combination drug screen. We nominated several targeted small molecules and novel combinations that have been validated in corresponding xenograft models.
CONCLUSION: This precision medicine approach outlines the integration of genomic data with drug screening from personalized preclinical cancer models to guide precision cancer care. It also fuels next generation research and has been implemented for clinical trial development.

Entities:  

Keywords:  Clinical decision-making; Drug evaluation; Precision medicine; Tumor Organoids; Xenografts

Mesh:

Year:  2017        PMID: 28956107     DOI: 10.1007/s00292-017-0346-1

Source DB:  PubMed          Journal:  Pathologe        ISSN: 0172-8113            Impact factor:   1.011


  23 in total

1.  An emerging role for cytopathology in precision oncology.

Authors:  Chantal Pauli; Loredana Puca; Juan Miguel Mosquera; Brian D Robinson; Himisha Beltran; Mark A Rubin; Rema A Rao
Journal:  Cancer Cytopathol       Date:  2015-12-07       Impact factor: 5.284

2.  Trial watch: phase II and phase III attrition rates 2011-2012.

Authors:  John Arrowsmith; Philip Miller
Journal:  Nat Rev Drug Discov       Date:  2013-08       Impact factor: 84.694

3.  Trial watch: phase III and submission failures: 2007-2010.

Authors:  John Arrowsmith
Journal:  Nat Rev Drug Discov       Date:  2011-02       Impact factor: 84.694

Review 4.  Three-dimensional cell cultures: from molecular mechanisms to clinical applications.

Authors:  W Mueller-Klieser
Journal:  Am J Physiol       Date:  1997-10

5.  Personalized In Vitro and In Vivo Cancer Models to Guide Precision Medicine.

Authors:  Chantal Pauli; Benjamin D Hopkins; Davide Prandi; Reid Shaw; Tarcisio Fedrizzi; Andrea Sboner; Verena Sailer; Michael Augello; Loredana Puca; Rachele Rosati; Terra J McNary; Yelena Churakova; Cynthia Cheung; Joanna Triscott; David Pisapia; Rema Rao; Juan Miguel Mosquera; Brian Robinson; Bishoy M Faltas; Brooke E Emerling; Vijayakrishna K Gadi; Brady Bernard; Olivier Elemento; Himisha Beltran; Francesca Demichelis; Christopher J Kemp; Carla Grandori; Lewis C Cantley; Mark A Rubin
Journal:  Cancer Discov       Date:  2017-03-22       Impact factor: 39.397

Review 6.  Humanized mouse models: Application to human diseases.

Authors:  Ryoji Ito; Takeshi Takahashi; Mamoru Ito
Journal:  J Cell Physiol       Date:  2017-07-04       Impact factor: 6.384

Review 7.  Clinical Applications of Circulating Tumor Cells and Circulating Tumor DNA as Liquid Biopsy.

Authors:  Catherine Alix-Panabières; Klaus Pantel
Journal:  Cancer Discov       Date:  2016-03-11       Impact factor: 39.397

Review 8.  Modeling Development and Disease with Organoids.

Authors:  Hans Clevers
Journal:  Cell       Date:  2016-06-16       Impact factor: 41.582

9.  Prospective derivation of a living organoid biobank of colorectal cancer patients.

Authors:  Marc van de Wetering; Hayley E Francies; Joshua M Francis; Gergana Bounova; Francesco Iorio; Apollo Pronk; Winan van Houdt; Joost van Gorp; Amaro Taylor-Weiner; Lennart Kester; Anne McLaren-Douglas; Joyce Blokker; Sridevi Jaksani; Sina Bartfeld; Richard Volckman; Peter van Sluis; Vivian S W Li; Sara Seepo; Chandra Sekhar Pedamallu; Kristian Cibulskis; Scott L Carter; Aaron McKenna; Michael S Lawrence; Lee Lichtenstein; Chip Stewart; Jan Koster; Rogier Versteeg; Alexander van Oudenaarden; Julio Saez-Rodriguez; Robert G J Vries; Gad Getz; Lodewyk Wessels; Michael R Stratton; Ultan McDermott; Matthew Meyerson; Mathew J Garnett; Hans Clevers
Journal:  Cell       Date:  2015-05-07       Impact factor: 41.582

10.  Development and characterisation of a 3D multi-cellular in vitro model of normal human breast: a tool for cancer initiation studies.

Authors:  Claire E Nash; Georgia Mavria; Euan W Baxter; Deborah L Holliday; Darren C Tomlinson; Darren Treanor; Vera Novitskaya; Fedor Berditchevski; Andrew M Hanby; Valerie Speirs
Journal:  Oncotarget       Date:  2015-05-30
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  1 in total

Review 1.  Clinical trial design: Past, present, and future in the context of big data and precision medicine.

Authors:  Allen Li; Raymond C Bergan
Journal:  Cancer       Date:  2020-09-15       Impact factor: 6.860

  1 in total

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