Literature DB >> 28955640

Cloning and expression analysis of tps, and cryopreservation research of trehalose from Antarctic strain Pseudozyma sp.

Hua Yin1, Yibin Wang2,3, Yingying He2, Lei Xing1, Xiufang Zhang4, Shuai Wang2,5, Xiaoqing Qi2,6, Zhou Zheng2,3, Jian Lu7, Jinlai Miao2,3.   

Abstract

Trehalose is a non-reducing disaccharide sugar that widely exists in a variety of organisms, such as bacteria and eukaryotes except the vertebrates. It plays an important role in a number of critical metabolic functions especially in response to stressful environmental conditions. However, the biosynthetic pathways of trehalose in cold-adapted yeast and its responses to temperature and salinity changes remain little understood. In this study, the genome of Antarctic-isolated Pseudozyma sp. NJ7 was generated from which we identified the gene coding for trehalose phosphate synthase (TPS1) and trehalose phosphate phosphatase (TPS2), the two enzymes most critical for trehalose production. The whole draft genome length of Pseudozyma sp. NJ7 was 18,021,233 bp, and encoded at least 34 rRNA operons and 72 tRNAs. The open reading frame of tps1 contained 1827 nucleotide encoding 608 amino acids with a molecular weight of 67.64 kDa, and an isoelectric point of 5.54, while tps2 contained 3948 nucleotide encoding 1315 amino acids with a molecular weight of 144.47 kDa and an isoelectric point of 6.36. The TPS1 and TPS2 protein sequences were highly homologous to Moesziomyces antarcticus T-34, but TPS2 had obvious specificity and differently with others which suggest species specificity and different evolutionary history. Expression level of tps1 gene was strongly influenced by temperature and high salinity. In addition, addition of 0.5% trehalose preserved yeast cells in the short term but was not effective for cryopreservation for more than 5 days, but still suggesting that exogenous trehalose could indeed significantly improve the survival of yeast cells under freezing conditions. Our results provided new insights on the molecular basis of cold adaptations of Antarctic Pseudozyma sp., and also generated new information on the roles trehalose play in yeast tolerance to extreme conditions in the extreme Antarctic environments.

Entities:  

Keywords:  Antarctic; Genome; Pseudozyma sp.; Trehalose; Trehalose phosphate synthase

Year:  2017        PMID: 28955640      PMCID: PMC5610133          DOI: 10.1007/s13205-017-0983-3

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  33 in total

1.  Improving the freeze tolerance of bakers' yeast by loading with trehalose.

Authors:  R Hirasawa; K Yokoigawa; Y Isobe; H Kawai
Journal:  Biosci Biotechnol Biochem       Date:  2001-03       Impact factor: 2.043

2.  SignalP 4.0: discriminating signal peptides from transmembrane regions.

Authors:  Thomas Nordahl Petersen; Søren Brunak; Gunnar von Heijne; Henrik Nielsen
Journal:  Nat Methods       Date:  2011-09-29       Impact factor: 28.547

3.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

4.  Yeast Tolerance to Various Stresses Relies on the Trehalose-6P Synthase (Tps1) Protein, Not on Trehalose.

Authors:  Marjorie Petitjean; Marie-Ange Teste; Jean M François; Jean-Luc Parrou
Journal:  J Biol Chem       Date:  2015-05-01       Impact factor: 5.157

5.  Analysis and modification of trehalose 6-phosphate levels in the yeast Saccharomyces cerevisiae with the use of Bacillus subtilis phosphotrehalase.

Authors:  C van Vaeck ; S Wera; P van Dijck ; J M Thevelein
Journal:  Biochem J       Date:  2001-01-01       Impact factor: 3.857

6.  Enhanced thermotolerance for ethanol fermentation of Saccharomyces cerevisiae strain by overexpression of the gene coding for trehalose-6-phosphate synthase.

Authors:  Ming-Zhe An; Yue-Qin Tang; Kanako Mitsumasu; Ze-Shen Liu; Morimura Shigeru; Kida Kenji
Journal:  Biotechnol Lett       Date:  2011-03-06       Impact factor: 2.461

Review 7.  The importance of a functional trehalose biosynthetic pathway for the life of yeasts and fungi.

Authors:  Carlos Gancedo; Carmen-Lisset Flores
Journal:  FEMS Yeast Res       Date:  2004-01       Impact factor: 2.796

8.  Yeast adapt to near-freezing temperatures by STRE/Msn2,4-dependent induction of trehalose synthesis and certain molecular chaperones.

Authors:  Olga Kandror; Nancy Bretschneider; Evgeniy Kreydin; Duccio Cavalieri; Alfred L Goldberg
Journal:  Mol Cell       Date:  2004-03-26       Impact factor: 17.970

Review 9.  Saccharomycopsis fibuligera and its applications in biotechnology.

Authors:  Zhenming Chi; Zhe Chi; Guanglei Liu; Fang Wang; Liang Ju; Tong Zhang
Journal:  Biotechnol Adv       Date:  2009-03-27       Impact factor: 14.227

10.  eggNOG v4.0: nested orthology inference across 3686 organisms.

Authors:  Sean Powell; Kristoffer Forslund; Damian Szklarczyk; Kalliopi Trachana; Alexander Roth; Jaime Huerta-Cepas; Toni Gabaldón; Thomas Rattei; Chris Creevey; Michael Kuhn; Lars J Jensen; Christian von Mering; Peer Bork
Journal:  Nucleic Acids Res       Date:  2013-12-01       Impact factor: 16.971

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  1 in total

Review 1.  Cryopreservation and the Freeze-Thaw Stress Response in Yeast.

Authors:  Elizabeth Cabrera; Laylah C Welch; Meaghan R Robinson; Candyce M Sturgeon; Mackenzie M Crow; Verónica A Segarra
Journal:  Genes (Basel)       Date:  2020-07-22       Impact factor: 4.096

  1 in total

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