Literature DB >> 28939194

Modification of C Terminus Provides New Insights into the Mechanism of α-Synuclein Aggregation.

Kseniia Afitska1, Anna Fucikova2, Volodymyr V Shvadchak1, Dmytro A Yushchenko3.   

Abstract

Aggregation of neuronal protein α-synuclein leads to the formation of amyloid fibrils, which are associated with the development of Parkinson's disease. The mechanism of α-synuclein pathology is not fully understood and is a subject of active research in the field. To tackle this problem, the fusions of fluorescent proteins to α-synuclein C-terminus are often used in cellular and animal studies. The effects induced by such α-synuclein sequence extension on α-synuclein aggregation propensity are, however, not systematically examined despite the evidence that the negatively charged C-terminus plays a critical role in the regulation of α-synuclein aggregation. In this work, we investigated how the charge and length variations of the C-terminus affect the aggregation propensity of α-synuclein. To address these questions, we prepared mutants of α-synuclein carrying additional moieties of different charge and length at the protein C-terminus. We determined the rates of two different aggregation stages (primary nucleation and elongation) based on a thioflavin T kinetic assay. We observed that all mutants bearing neutrally charged moieties of different length fibrilized slower than wild-type α-synuclein. The primary nucleation and elongation rates strongly decreased with increase of the C-terminal extension length. Meanwhile, charge variation of the C-terminus significantly changed the rate of α-synuclein nucleation, but did not markedly affect the rate of fibril elongation. Our data demonstrate that both the charge and length of the C-terminus play an important role at the stage of initial fibril formation, but the stage of fibril elongation is affected mainly by the length of C-terminal extension. In addition, our results suggest that there are at least two steps of incorporation of α-synuclein monomers into the amyloid fibril: namely, the initial monomer binding to the fibril end (charge-dependent, relatively fast), and the subsequent conformational change of the protein (charge-independent, relatively slow, and thus the rate-limiting step).
Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 28939194      PMCID: PMC5700244          DOI: 10.1016/j.bpj.2017.08.027

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  61 in total

1.  Structural organization of alpha-synuclein fibrils studied by site-directed spin labeling.

Authors:  Ani Der-Sarkissian; Christine C Jao; Jeannie Chen; Ralf Langen
Journal:  J Biol Chem       Date:  2003-06-18       Impact factor: 5.157

2.  Impact of the acidic C-terminal region comprising amino acids 109-140 on alpha-synuclein aggregation in vitro.

Authors:  Wolfgang Hoyer; Dmitry Cherny; Vinod Subramaniam; Thomas M Jovin
Journal:  Biochemistry       Date:  2004-12-28       Impact factor: 3.162

3.  Evidence for stepwise formation of amyloid fibrils by the mouse prion protein.

Authors:  Shweta Jain; Jayant B Udgaonkar
Journal:  J Mol Biol       Date:  2008-07-26       Impact factor: 5.469

4.  Fluorescent ratiometric MFC probe sensitive to early stages of alpha-synuclein aggregation.

Authors:  Dmytro A Yushchenko; Jonathan A Fauerbach; Shyamala Thirunavukkuarasu; Elizabeth A Jares-Erijman; Thomas M Jovin
Journal:  J Am Chem Soc       Date:  2010-06-16       Impact factor: 15.419

5.  The effect of fluorescent labeling on α-synuclein fibril morphology.

Authors:  M Mučibabić; M M Apetri; G W Canters; T J Aartsma
Journal:  Biochim Biophys Acta       Date:  2016-07-28

6.  Novel Dimer Compounds That Bind α-Synuclein Can Rescue Cell Growth in a Yeast Model Overexpressing α-Synuclein. A Possible Prevention Strategy for Parkinson's Disease.

Authors:  Joe Kakish; Kevin J H Allen; Troy A Harkness; Ed S Krol; Jeremy S Lee
Journal:  ACS Chem Neurosci       Date:  2016-10-07       Impact factor: 4.418

7.  Assembly of alpha-synuclein fibrils in nanoscale studied by peptide truncation and AFM.

Authors:  Feng Zhang; Xiao-Jing Lin; Li-Na Ji; Hai-Ning Du; Lin Tang; Jian-Hua He; Jun Hu; Hong-Yu Hu
Journal:  Biochem Biophys Res Commun       Date:  2008-01-28       Impact factor: 3.575

8.  The Effect of Fragmented Pathogenic α-Synuclein Seeds on Prion-like Propagation.

Authors:  Airi Tarutani; Genjiro Suzuki; Aki Shimozawa; Takashi Nonaka; Haruhiko Akiyama; Shin-Ichi Hisanaga; Masato Hasegawa
Journal:  J Biol Chem       Date:  2016-07-05       Impact factor: 5.157

9.  Solution conditions determine the relative importance of nucleation and growth processes in α-synuclein aggregation.

Authors:  Alexander K Buell; Céline Galvagnion; Ricardo Gaspar; Emma Sparr; Michele Vendruscolo; Tuomas P J Knowles; Sara Linse; Christopher M Dobson
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-09       Impact factor: 11.205

10.  Role of C-terminal negative charges and tyrosine residues in fibril formation of α-synuclein.

Authors:  Yasutaka Izawa; Hironobu Tateno; Hiroshi Kameda; Kazuya Hirakawa; Keiko Hato; Hisashi Yagi; Kunihiro Hongo; Tomohiro Mizobata; Yasushi Kawata
Journal:  Brain Behav       Date:  2012-08-10       Impact factor: 2.708

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  15 in total

1.  Physiological C-terminal truncation of α-synuclein potentiates the prion-like formation of pathological inclusions.

Authors:  Zachary A Sorrentino; Niran Vijayaraghavan; Kimberly-Marie Gorion; Cara J Riffe; Kevin H Strang; Jason Caldwell; Benoit I Giasson
Journal:  J Biol Chem       Date:  2018-10-16       Impact factor: 5.157

Review 2.  The emerging role of α-synuclein truncation in aggregation and disease.

Authors:  Zachary A Sorrentino; Benoit I Giasson
Journal:  J Biol Chem       Date:  2020-05-18       Impact factor: 5.157

3.  Characterization of Amyloidogenic Peptide Aggregability in Helical Subspace.

Authors:  Shayon Bhattacharya; Liang Xu; Damien Thompson
Journal:  Methods Mol Biol       Date:  2022

Review 4.  Glycoconjugate journal special issue on: the glycobiology of Parkinson's disease.

Authors:  Inka Brockhausen; John Schutzbach; Jiabei Wang; Beth Fishwick; Jennifer Brockhausen
Journal:  Glycoconj J       Date:  2021-11-10       Impact factor: 2.916

5.  Photoredox-Catalyzed Decarboxylative C-Terminal Differentiation for Bulk- and Single-Molecule Proteomics.

Authors:  Le Zhang; Brendan M Floyd; Maheshwerreddy Chilamari; James Mapes; Jagannath Swaminathan; Steven Bloom; Edward M Marcotte; Eric V Anslyn
Journal:  ACS Chem Biol       Date:  2021-11-04       Impact factor: 5.100

6.  Extent of N-terminus exposure of monomeric alpha-synuclein determines its aggregation propensity.

Authors:  Amberley D Stephens; Maria Zacharopoulou; Rani Moons; Giuliana Fusco; Neeleema Seetaloo; Anass Chiki; Philippa J Woodhams; Ioanna Mela; Hilal A Lashuel; Jonathan J Phillips; Alfonso De Simone; Frank Sobott; Gabriele S Kaminski Schierle
Journal:  Nat Commun       Date:  2020-06-04       Impact factor: 14.919

7.  The distinct RNA-interaction modes of a small ZnF domain underlay TUT4(7) diverse action in miRNA regulation.

Authors:  Belén Chaves-Arquero; Katherine M Collins; Evangelos Christodoulou; Giuseppe Nicastro; Stephen R Martin; Andres Ramos
Journal:  RNA Biol       Date:  2021-11-01       Impact factor: 4.652

8.  Non-monotonic fibril surface occlusion by GFP tags from coarse-grained molecular simulations.

Authors:  Julian C Shillcock; Janna Hastings; Nathan Riguet; Hilal A Lashuel
Journal:  Comput Struct Biotechnol J       Date:  2021-12-15       Impact factor: 7.271

9.  Genetic encoding of a highly photostable, long lifetime fluorescent amino acid for imaging in mammalian cells.

Authors:  Chloe M Jones; D Miklos Robkis; Robert J Blizzard; Mika Munari; Yarra Venkatesh; Tiberiu S Mihaila; Alex J Eddins; Ryan A Mehl; William N Zagotta; Sharona E Gordon; E James Petersson
Journal:  Chem Sci       Date:  2021-08-03       Impact factor: 9.969

10.  Snca-GFP Knock-In Mice Reflect Patterns of Endogenous Expression and Pathological Seeding.

Authors:  Anna Caputo; Yuling Liang; Tobias D Raabe; Angela Lo; Mian Horvath; Bin Zhang; Hannah J Brown; Anna Stieber; Kelvin C Luk
Journal:  eNeuro       Date:  2020-08-27
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