Literature DB >> 24817693

Solution conditions determine the relative importance of nucleation and growth processes in α-synuclein aggregation.

Alexander K Buell1, Céline Galvagnion1, Ricardo Gaspar2, Emma Sparr2, Michele Vendruscolo1, Tuomas P J Knowles1, Sara Linse3, Christopher M Dobson4.   

Abstract

The formation of amyloid fibrils by the intrinsically disordered protein α-synuclein is a hallmark of Parkinson disease. To characterize the microscopic steps in the mechanism of aggregation of this protein we have used in vitro aggregation assays in the presence of preformed seed fibrils to determine the molecular rate constant of fibril elongation under a range of different conditions. We show that α-synuclein amyloid fibrils grow by monomer and not oligomer addition and are subject to higher-order assembly processes that decrease their capacity to grow. We also find that at neutral pH under quiescent conditions homogeneous primary nucleation and secondary processes, such as fragmentation and surface-assisted nucleation, which can lead to proliferation of the total number of aggregates, are undetectable. At pH values below 6, however, the rate of secondary nucleation increases dramatically, leading to a completely different balance between the nucleation and growth of aggregates. Thus, at mildly acidic pH values, such as those, for example, that are present in some intracellular locations, including endosomes and lysosomes, multiplication of aggregates is much faster than at normal physiological pH values, largely as a consequence of much more rapid secondary nucleation. These findings provide new insights into possible mechanisms of α-synuclein aggregation and aggregate spreading in the context of Parkinson disease.

Entities:  

Keywords:  electrostatic interactions; kinetic analysis; neurodegenerative disease; prion-like behavior; seeding

Mesh:

Substances:

Year:  2014        PMID: 24817693      PMCID: PMC4040554          DOI: 10.1073/pnas.1315346111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

1.  NMR determination of pKa values in α-synuclein.

Authors:  Robyn L Croke; Sharadrao M Patil; Jason Quevreaux; Debra A Kendall; Andrei T Alexandrescu
Journal:  Protein Sci       Date:  2010-12-13       Impact factor: 6.725

2.  The direct linear plot. A new graphical procedure for estimating enzyme kinetic parameters.

Authors:  R Eisenthal; A Cornish-Bowden
Journal:  Biochem J       Date:  1974-06       Impact factor: 3.857

3.  Alpha-synuclein in alpha-helical conformation at air-water interface: implication of conformation and orientation changes during its accumulation/aggregation.

Authors:  Chengshan Wang; Nilam Shah; Garima Thakur; Feimeng Zhou; Roger M Leblanc
Journal:  Chem Commun (Camb)       Date:  2010-08-16       Impact factor: 6.222

4.  Critical nucleus size for disease-related polyglutamine aggregation is repeat-length dependent.

Authors:  Karunakar Kar; Murali Jayaraman; Bankanidhi Sahoo; Ravindra Kodali; Ronald Wetzel
Journal:  Nat Struct Mol Biol       Date:  2011-02-13       Impact factor: 15.369

5.  The presence of an air-water interface affects formation and elongation of α-Synuclein fibrils.

Authors:  Silvia Campioni; Guillaume Carret; Sophia Jordens; Lucrèce Nicoud; Raffaele Mezzenga; Roland Riek
Journal:  J Am Chem Soc       Date:  2014-02-05       Impact factor: 15.419

6.  Inclusion formation and neuronal cell death through neuron-to-neuron transmission of alpha-synuclein.

Authors:  Paula Desplats; He-Jin Lee; Eun-Jin Bae; Christina Patrick; Edward Rockenstein; Leslie Crews; Brian Spencer; Eliezer Masliah; Seung-Jae Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-27       Impact factor: 11.205

7.  Measurement and modelling of sequence-specific pKa values of lysine residues in calbindin D9k.

Authors:  T Kesvatera; B Jönsson; E Thulin; S Linse
Journal:  J Mol Biol       Date:  1996-06-21       Impact factor: 5.469

8.  Role of elongation and secondary pathways in S6 amyloid fibril growth.

Authors:  Nikolai Lorenzen; Samuel I A Cohen; Søren B Nielsen; Therese W Herling; Gunna Christiansen; Christopher M Dobson; Tuomas P J Knowles; Daniel Otzen
Journal:  Biophys J       Date:  2012-05-02       Impact factor: 4.033

9.  Direct observation of the interconversion of normal and toxic forms of α-synuclein.

Authors:  Nunilo Cremades; Samuel I A Cohen; Emma Deas; Andrey Y Abramov; Allen Y Chen; Angel Orte; Massimo Sandal; Richard W Clarke; Paul Dunne; Francesco A Aprile; Carlos W Bertoncini; Nicholas W Wood; Tuomas P J Knowles; Christopher M Dobson; David Klenerman
Journal:  Cell       Date:  2012-05-25       Impact factor: 41.582

10.  Mechanism of prion propagation: amyloid growth occurs by monomer addition.

Authors:  Sean R Collins; Adam Douglass; Ronald D Vale; Jonathan S Weissman
Journal:  PLoS Biol       Date:  2004-09-21       Impact factor: 8.029

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  188 in total

1.  Amyloid-β (Aβ42) Peptide Aggregation Rate and Mechanism on Surfaces with Widely Varied Properties: Insights from Brownian Dynamics Simulations.

Authors:  Timothy Cholko; Joseph Barnum; Chia-En A Chang
Journal:  J Phys Chem B       Date:  2020-06-26       Impact factor: 2.991

2.  A pH-dependent switch promotes β-synuclein fibril formation via glutamate residues.

Authors:  Gina M Moriarty; Michael P Olson; Tamr B Atieh; Maria K Janowska; Sagar D Khare; Jean Baum
Journal:  J Biol Chem       Date:  2017-07-14       Impact factor: 5.157

Review 3.  Impact of membrane curvature on amyloid aggregation.

Authors:  Mayu S Terakawa; Yuxi Lin; Misaki Kinoshita; Shingo Kanemura; Dai Itoh; Toshihiko Sugiki; Masaki Okumura; Ayyalusamy Ramamoorthy; Young-Ho Lee
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-04-28       Impact factor: 3.747

4.  Preventing peptide and protein misbehavior.

Authors:  Paolo Arosio; Georg Meisl; Maria Andreasen; Tuomas P J Knowles
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-20       Impact factor: 11.205

5.  Pseudocatalytic Antiaggregation Activity of Antibodies: Immunoglobulins can Influence α-Synuclein Aggregation at Substoichiometric Concentrations.

Authors:  Leonid Breydo; Dave Morgan; Vladimir N Uversky
Journal:  Mol Neurobiol       Date:  2015-04-02       Impact factor: 5.590

6.  A first order phase transition mechanism underlies protein aggregation in mammalian cells.

Authors:  Arjun Narayanan; Anatoli Meriin; J Owen Andrews; Jan-Hendrik Spille; Michael Y Sherman; Ibrahim I Cisse
Journal:  Elife       Date:  2019-02-04       Impact factor: 8.140

7.  MOAG-4 promotes the aggregation of α-synuclein by competing with self-protective electrostatic interactions.

Authors:  Yuichi Yoshimura; Mats A Holmberg; Predrag Kukic; Camilla B Andersen; Alejandro Mata-Cabana; S Fabio Falsone; Michele Vendruscolo; Ellen A A Nollen; Frans A A Mulder
Journal:  J Biol Chem       Date:  2017-03-23       Impact factor: 5.157

8.  A natural product inhibits the initiation of α-synuclein aggregation and suppresses its toxicity.

Authors:  Michele Perni; Céline Galvagnion; Alexander Maltsev; Georg Meisl; Martin B D Müller; Pavan K Challa; Julius B Kirkegaard; Patrick Flagmeier; Samuel I A Cohen; Roberta Cascella; Serene W Chen; Ryan Limbocker; Pietro Sormanni; Gabriella T Heller; Francesco A Aprile; Nunilo Cremades; Cristina Cecchi; Fabrizio Chiti; Ellen A A Nollen; Tuomas P J Knowles; Michele Vendruscolo; Adriaan Bax; Michael Zasloff; Christopher M Dobson
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

9.  The effect of truncation on prion-like properties of α-synuclein.

Authors:  Makoto Terada; Genjiro Suzuki; Takashi Nonaka; Fuyuki Kametani; Akira Tamaoka; Masato Hasegawa
Journal:  J Biol Chem       Date:  2018-07-20       Impact factor: 5.157

Review 10.  Interactions between the Intrinsically Disordered Proteins β-Synuclein and α-Synuclein.

Authors:  Jonathan K Williams; Xue Yang; Jean Baum
Journal:  Proteomics       Date:  2018-09-09       Impact factor: 3.984

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