Literature DB >> 27933779

Structural Basis for the Unusual Qy Red-Shift and Enhanced Thermostability of the LH1 Complex from Thermochromatium tepidum.

Long-Jiang Yu1, Tomoaki Kawakami1, Yukihiro Kimura2, Zheng-Yu Wang-Otomo1.   

Abstract

While the majority of the core light-harvesting complexes (LH1) in purple photosynthetic bacteria exhibit a Qy absorption band in the range of 870-890 nm, LH1 from the thermophilic bacterium Thermochromatium tepidum displays the Qy band at 915 nm with an enhanced thermostability. These properties are regulated by Ca2+ ions. Substitution of the Ca2+ with other divalent metal ions results in a complex with the Qy band blue-shifted to 880-890 nm and a reduced thermostability. Following the recent publication of the structure of the Ca-bound LH1-reaction center (RC) complex [Niwa, S., et al. (2014) Nature 508, 228], we have determined the crystal structures of the Sr- and Ba-substituted LH1-RC complexes with the LH1 Qy band at 888 nm. Sixteen Sr2+ and Ba2+ ions are identified in the LH1 complexes. Both Sr2+ and Ba2+ are located at the same positions, and these are clearly different from, though close to, the Ca2+-binding sites. Conformational rearrangement induced by the substitution is limited to the metal-binding sites. Unlike the Ca-LH1-RC complex, only the α-polypeptides are involved in the Sr and Ba coordinations in LH1. The difference in the thermostability between these complexes can be attributed to the different patterns of the network formed by metal binding. The Sr- and Ba-LH1-RC complexes form a single-ring network by the LH1 α-polypeptides only, in contrast to the double-ring network composed of both α- and β-polypeptides in the Ca-LH1-RC complex. On the basis of the structural information, a combined effect of hydrogen bonding, structural integrity, and charge distribution is considered to influence the spectral properties of the core antenna complex.

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Year:  2016        PMID: 27933779     DOI: 10.1021/acs.biochem.6b00742

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  C-terminal cleavage of the LH1 α-polypeptide in the Sr2+-cultured Thermochromatium tepidum.

Authors:  Yukihiro Kimura; Tomoaki Kawakami; Teruhisa Arikawa; Yong Li; Long-Jiang Yu; Takashi Ohno; Michael T Madigan; Zheng-Yu Wang-Otomo
Journal:  Photosynth Res       Date:  2017-05-10       Impact factor: 3.573

Review 2.  A comparative look at structural variation among RC-LH1 'Core' complexes present in anoxygenic phototrophic bacteria.

Authors:  Alastair T Gardiner; Tu C Nguyen-Phan; Richard J Cogdell
Journal:  Photosynth Res       Date:  2020-05-19       Impact factor: 3.573

3.  Probing structure-function relationships in early events in photosynthesis using a chimeric photocomplex.

Authors:  Kenji V P Nagashima; Mai Sasaki; Kanako Hashimoto; Shinichi Takaichi; Sakiko Nagashima; Long-Jiang Yu; Yuto Abe; Kenta Gotou; Tomoaki Kawakami; Mizuki Takenouchi; Yuuta Shibuya; Akira Yamaguchi; Takashi Ohno; Jian-Ren Shen; Kazuhito Inoue; Michael T Madigan; Yukihiro Kimura; Zheng-Yu Wang-Otomo
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-21       Impact factor: 11.205

4.  Engineering of a calcium-ion binding site into the RC-LH1-PufX complex of Rhodobacter sphaeroides to enable ion-dependent spectral red-shifting.

Authors:  David J K Swainsbury; Elizabeth C Martin; Cvetelin Vasilev; Pamela S Parkes-Loach; Paul A Loach; C Neil Hunter
Journal:  Biochim Biophys Acta Bioenerg       Date:  2017-08-18       Impact factor: 3.991

5.  A Ca2+-binding motif underlies the unusual properties of certain photosynthetic bacterial core light-harvesting complexes.

Authors:  Kazutoshi Tani; Kazumi Kobayashi; Naoki Hosogi; Xuan-Cheng Ji; Sakiko Nagashima; Kenji V P Nagashima; Airi Izumida; Kazuhito Inoue; Yusuke Tsukatani; Ryo Kanno; Malgorzata Hall; Long-Jiang Yu; Isamu Ishikawa; Yoshihiro Okura; Michael T Madigan; Akira Mizoguchi; Bruno M Humbel; Yukihiro Kimura; Zheng-Yu Wang-Otomo
Journal:  J Biol Chem       Date:  2022-04-20       Impact factor: 5.486

  5 in total

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