Literature DB >> 28931735

DNA metabarcoding of orchid-derived products reveals widespread illegal orchid trade.

Hugo J de Boer1,2,3, Abdolbaset Ghorbani2, Vincent Manzanilla4, Ancuta-Cristina Raclariu4,5, Anna Kreziou6, Sarawut Ounjai7, Maslin Osathanunkul7, Barbara Gravendeel3.   

Abstract

In eastern Mediterranean countries orchids continue to be collected from the wild for the production of salep, a beverage made of dried orchid tubers. In this study we used nrITS1 and nrITS2 DNA metabarcoding to identify orchid and other plant species present in 55 commercial salep products purchased in Iran, Turkey, Greece and Germany. Thirty samples yielded a total of 161 plant taxa, and 13 products (43%) contained orchid species and these belonged to 10 terrestrial species with tuberous roots. Another 70% contained the substitute ingredient Cyamopsis tetraganoloba (Guar). DNA metabarcoding using the barcoding markers nrITS1 and nrITS2 shows the potential of these markers and approach for identification of species used in salep products. The analysis of interspecific genetic distances between sequences of these markers for the most common salep orchid genera shows that species level identifications can be made with a high level of confidence. Understanding the species diversity and provenance of salep orchid tubers will enable the chain of commercialization of endangered species to be traced back to the harvesters and their natural habitats, and thus allow for targeted efforts to protect or sustainably use wild populations of these orchids.
© 2017 The Author(s).

Entities:  

Keywords:  CITES; DNA metabarcoding; food safety; forensic botany; orchids; salep

Mesh:

Substances:

Year:  2017        PMID: 28931735      PMCID: PMC5627200          DOI: 10.1098/rspb.2017.1182

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  51 in total

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Review 2.  The uses and misuses of orchids in medicine.

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4.  Phylogenetic analysis of Sorghum and related taxa using internal transcribed spacers of nuclear ribosomal DNA.

Authors:  Y Sun; D Z Skinner; G H Liang; S H Hulbert
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5.  ITS1 versus ITS2 as DNA metabarcodes for fungi.

Authors:  R Blaalid; S Kumar; R H Nilsson; K Abarenkov; P M Kirk; H Kauserud
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6.  Towards next-generation biodiversity assessment using DNA metabarcoding.

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7.  An in silico approach for the evaluation of DNA barcodes.

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Authors:  Martijn Staats; Alfred J Arulandhu; Barbara Gravendeel; Arne Holst-Jensen; Ingrid Scholtens; Tamara Peelen; Theo W Prins; Esther Kok
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10.  Using DNA Metabarcoding to Identify the Floral Composition of Honey: A New Tool for Investigating Honey Bee Foraging Preferences.

Authors:  Jennifer Hawkins; Natasha de Vere; Adelaide Griffith; Col R Ford; Joel Allainguillaume; Matthew J Hegarty; Les Baillie; Beverley Adams-Groom
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  11 in total

1.  DNA metabarcoding of orchid-derived products reveals widespread illegal orchid trade.

Authors:  Hugo J de Boer; Abdolbaset Ghorbani; Vincent Manzanilla; Ancuta-Cristina Raclariu; Anna Kreziou; Sarawut Ounjai; Maslin Osathanunkul; Barbara Gravendeel
Journal:  Proc Biol Sci       Date:  2017-09-27       Impact factor: 5.349

2.  Molecular characterization of endangered Iranian terrestrial orchids using ISSR markers and association with floral and tuber-related phenotypic traits.

Authors:  Soheila Gholami; Yavar Vafaee; Farzad Nazari; Abdolbaset Ghorbani
Journal:  Physiol Mol Biol Plants       Date:  2021-01-16

3.  Exploring genetic variations in threatened medicinal orchids using start codon targeted (SCoT) polymorphism and marker-association with seed morphometric traits.

Authors:  Soheila Gholami; Yavar Vafaee; Farzad Nazari; Abdolbaset Ghorbani
Journal:  Physiol Mol Biol Plants       Date:  2021-03-23

Review 4.  Orchid conservation: how can we meet the challenges in the twenty-first century?

Authors:  Michael F Fay
Journal:  Bot Stud       Date:  2018-06-05       Impact factor: 2.787

5.  Improved Protocols of ITS1-Based Metabarcoding and Their Application in the Analysis of Plant-Containing Products.

Authors:  Denis O Omelchenko; Anna S Speranskaya; Andrey A Ayginin; Kamil Khafizov; Anastasia A Krinitsina; Anna V Fedotova; Denis V Pozdyshev; Viktoria Y Shtratnikova; Evgenia V Kupriyanova; German A Shipulin; Maria D Logacheva
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Review 6.  The DNA-Based Authentication of Commercial Herbal Products Reveals Their Globally Widespread Adulteration.

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7.  The specific DNA barcodes based on chloroplast genes for species identification of Orchidaceae plants.

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8.  Implications of salep collection for the conservation of the Elder-flowered orchid (Dactylorhiza sambucina) in Epirus, Greece.

Authors:  Martha Charitonidou; Kalliopi Stara; Konstantinos Kougioumoutzis; John M Halley
Journal:  J Biol Res (Thessalon)       Date:  2019-12-30       Impact factor: 1.889

9.  DNA metabarcoding to unravel plant species composition in selected herbal medicines on the National List of Essential Medicines (NLEM) of Thailand.

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Journal:  Sci Rep       Date:  2020-10-26       Impact factor: 4.379

10.  Target sequence capture in orchids: Developing a kit to sequence hundreds of single-copy loci.

Authors:  Lauren A Eserman; Shawn K Thomas; Emily E D Coffey; James H Leebens-Mack
Journal:  Appl Plant Sci       Date:  2021-05-17       Impact factor: 1.936

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