Literature DB >> 28927704

The catalytic cycle of nitrous oxide reductase - The enzyme that catalyzes the last step of denitrification.

Cíntia Carreira1, Sofia R Pauleta2, Isabel Moura3.   

Abstract

The reduction of the potent greenhouse gas nitrous oxide requires a catalyst to overcome the large activation energy barrier of this reaction. Its biological decomposition to the inert dinitrogen can be accomplished by denitrifiers through nitrous oxide reductase, the enzyme that catalyzes the last step of the denitrification, a pathway of the biogeochemical nitrogen cycle. Nitrous oxide reductase is a multicopper enzyme containing a mixed valence CuA center that can accept electrons from small electron shuttle proteins, triggering electron flow to the catalytic sulfide-bridged tetranuclear copper "CuZ center". This enzyme has been isolated with its catalytic center in two forms, CuZ*(4Cu1S) and CuZ(4Cu2S), proven to be spectroscopic and structurally different. In the last decades, it has been a challenge to characterize the properties of this complex enzyme, due to the different oxidation states observed for each of its centers and the heterogeneity of its preparations. The substrate binding site in those two "CuZ center" forms and which is the active form of the enzyme is still a matter of debate. However, in the last years the application of different spectroscopies, together with theoretical calculations have been useful in answering these questions and in identifying intermediate species of the catalytic cycle. An overview of the spectroscopic, kinetics and structural properties of the two forms of the catalytic "CuZ center" is given here, together with the current knowledge on nitrous oxide reduction mechanism by nitrous oxide reductase and its intermediate species.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Catalytic cycle; Copper enzyme; CuZ(0); Denitrification; Greenhouse effect; Nitrous oxide reductase

Mesh:

Substances:

Year:  2017        PMID: 28927704     DOI: 10.1016/j.jinorgbio.2017.09.007

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  9 in total

1.  Biochar as electron donor for reduction of N2O by Paracoccus denitrificans.

Authors:  Mª Blanca Pascual; Miguel Ángel Sánchez-Monedero; María L Cayuela; Shun Li; Stefan B Haderlein; Reiner Ruser; Andreas Kappler
Journal:  FEMS Microbiol Ecol       Date:  2020-08-01       Impact factor: 4.194

2.  The effect of pH on Marinobacter hydrocarbonoclasticus denitrification pathway and nitrous oxide reductase.

Authors:  Cíntia Carreira; Rute F Nunes; Olga Mestre; Isabel Moura; Sofia R Pauleta
Journal:  J Biol Inorg Chem       Date:  2020-08-26       Impact factor: 3.358

Review 3.  Orchestrating copper binding: structure and variations on the cupredoxin fold.

Authors:  Jing Guo; Oriana S Fisher
Journal:  J Biol Inorg Chem       Date:  2022-08-22       Impact factor: 3.862

4.  Catalytic M Center of Copper Monooxygenases Probed by Rational Design. Effects of Selenomethionine and Histidine Substitution on Structure and Reactivity.

Authors:  Katherine B Alwan; Evan F Welch; Ninian J Blackburn
Journal:  Biochemistry       Date:  2019-10-28       Impact factor: 3.162

5.  NosL is a dedicated copper chaperone for assembly of the CuZ center of nitrous oxide reductase.

Authors:  Sophie P Bennett; Manuel J Soriano-Laguna; Justin M Bradley; Dimitri A Svistunenko; David J Richardson; Andrew J Gates; Nick E Le Brun
Journal:  Chem Sci       Date:  2019-04-18       Impact factor: 9.825

6.  Effects of cobalt-histidine absorbent on aerobic denitrification by Paracoccus versutus LYM.

Authors:  Chaoyue Sun; Yu Zhang; Zhenping Qu; Jiti Zhou
Journal:  AMB Express       Date:  2019-12-17       Impact factor: 3.298

7.  nosX is essential for whole-cell N2O reduction in Paracoccus denitrificans but not for assembly of copper centres of nitrous oxide reductase.

Authors:  Sophie P Bennett; Maria J Torres; Manuel J Soriano-Laguna; David J Richardson; Andrew J Gates; Nick E Le Brun
Journal:  Microbiology (Reading)       Date:  2020-10       Impact factor: 2.777

8.  NosZ gene cloning, reduction performance and structure of Pseudomonas citronellolis WXP-4 nitrous oxide reductase.

Authors:  Liyong Hu; Xiaoping Wang; Cong Chen; Jianmeng Chen; Zeyu Wang; Jun Chen; Dzmitry Hrynshpan; Tatsiana Savitskaya
Journal:  RSC Adv       Date:  2022-01-19       Impact factor: 3.361

9.  Coordination chemistry of the CuZ site in nitrous oxide reductase and its synthetic mimics.

Authors:  Suresh C Rathnayaka; Neal P Mankad
Journal:  Coord Chem Rev       Date:  2020-12-19       Impact factor: 22.315

  9 in total

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