| Literature DB >> 28919695 |
Ankita Gurao1, Sudhir Kumar Kashyap1, Ravinder Singh2.
Abstract
Immune challenges are inevitable for livestock that are exposed to a varied range of adverse conditions ranging from environmental to pathogenic stresses. The β-defensins are antimicrobial peptides, belonging to "defensin" family and therefore acts as the first line of defense against the major infections occurring in dairy cattle including intramammary infections. The better resistance to mastitis displayed by Bos indicus is implicit in the fact that they have better adapted and also has more sequence variation with rare allele conserved due to lesser artificial selection pressure than that of Bos taurus. Among the 58 in silico predicted β-defensins, only a few have been studied in the aspect of intramammary infections. The data on polymorphisms occurring in various β-defensin genes is limited in B. indicus, indicating toward higher possibilities for exploring marker for mastitis resistance. The following review shall focus on concisely summarizing the up-to-date research on β-defensins in B. taurus and discuss the possible scope for research in B. indicus.Entities:
Keywords: Bos indicus; mastitis; β-defensins
Year: 2017 PMID: 28919695 PMCID: PMC5591491 DOI: 10.14202/vetworld.2017.990-998
Source DB: PubMed Journal: Vet World ISSN: 0972-8988
Subfamilies of mammalian defensins.
| Subfamily | Structure | Cysteine bonding | Distribution | References |
|---|---|---|---|---|
| α | Linear | C1-C6, C2-C4, C3-C5 | Mammals | Selsted |
| β | Linear | C1-C5, C2-C4, C3-C6 | Mammals | Diamond |
| θ/retrocyclins | Circular | C1-C6, C2-C4, C3-C5 | Rhesus | Tran |
Reported only in Rhesus monkey among mammals
Figure-1Multiple sequence alignment file for the β-defensins reviewed (the green color highlighted areas indicates the highly conserved six cysteine residues, which forms the basic definition of β-defensins and the yellow highlighted sequence are the signal peptide region for respective beta defensins).
The physical, chemical, and secondary structure predictions for the cattle β-defensins.
| Name | Physiochemical parameters | Secondary structure predictions | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Amino acid length | Molecular weight | Theoretical PI | Instability index | Aliphatic index | GRAVY | α helix | β helix | Transmembrane helix | |
| TAP | 64 | 6953.1 | 10.26 | 18.54 | 103.44 | 0.431 | 33 | 30 | 25 |
| LAP | 64 | 7041.50 | 11.24 | 50.66 | 95.94 | 0.122 | 47 | 16 | 25 |
| DEFB1S1 | 60 | 6665.98 | 8.98 | 28.16 | 102.33 | 0.447 | 48 | 18 | - |
| DEFB1S2 | 54 | 6115.0 | 9.30 | 76.97 | 77.59 | -0.519 | 46 | 11 | - |
| DEFB3 | 60 | 6764.17 | 11.47 | 18.00 | 97.50 | 0.243 | 23 | 33 | - |
| DEFB4 | 63 | 7233.74 | 11.46 | 46.73 | 86.51 | 0.278 | 33 | 25 | - |
| DEFB5 | 64 | 7227.73 | 10.47 | 59.02 | 95.78 | 0.380 | 53 | 9 | 25 |
| DEFB10 | 62 | 6954.46 | 10.35 | 39.25 | 114.68 | 0.429 | 50 | 13 | - |
| DEFB103 | 67 | 7614.31 | 9.93 | 40.62 | 106.27 | 0.185 | 52 | 18 | 24 |
TAP=Tracheal antimicrobial peptide, LAP=Lingual antimicrobial peptide, DEFB1S1 and DEFB1S2=Splice variants of β-defensin 1 peptide, DEFB3=β-defensin 3 peptide, DEFB4=β-defensin 4 peptide, DEFB5=β-defensin 5 peptide, DEFB10=β-defensin 10 peptide, DEFB103=β-defensin 103 peptide,
GRAVY=Grand average of hydropathicity, PI=Isoelectric point
Clusters of β-defensin in cattle (adapted from Meade et al., [24]).
| Cluster | Chromosome no. | Genes number(s) | Expressed in tissue/organ(s) | Function(s) |
|---|---|---|---|---|
| A | Btau 8 | 4 | Unknown | Unknown |
| B | Btau 13 | 19 | Reproductive tract | |
| C | Btau 23 | 5 | Unknown | Unknown |
| D | Btau 27 | 30 | Neutrophils, macrophages and epithelium tissues | Inducible in response to LPS and pathogens such as |
SNP=Single nucleotide polymorphisms, LPS=Lipopolysaccharide, SCC=Somatic cell count, E. coli=Escherichia coli, S. aureus=Staphylococcus aureus
The list of gene in mammary gland and their clinical relevance (adapted from Roosen et al., [31]).
| Gene | Expressed tissue/cell | Lactating status and clinical finding (or) treatment |
|---|---|---|
| LAP | MGT | J-H, L-H, L-I, NL-H |
| TAP | MGT | L-H |
| DEFB3 | MGT | L-H |
| DEFB4 | MGT[ | L-I |
| DEFB5 | MGT[ | L-I*, |
| DEFB1 | MGT[ | |
| DEFB103 | Other than mammary gland | NA |
Roosen et al., [31],
Lopez-Meza et al., [44],
Bagnicka et al., [53],
Jin et al., [41],
Cormac et al., [50],
Mirabzadeh-Ardakani et al., [59]. TAP=Tracheal antimicrobial peptide, LAP=Lingual antimicrobial peptide, DEFB3=β-defensin 3, DEFB4=β-defensin 4, DEFB5=β-defensin 5, DEFB1=β-defensin 1, DEFB103=β-defensin 103, MGT=Mammary gland tissue, MSC=Milk somatic cells, J=Juvenile, L=Lactating, NL=Non-lactating, H=Healthy, I=Infected, S. aureus=Staphylococcus aureus
Figure-2Secondary structures for the β-defensins, (a) lingual antimicrobial peptide (LAP), (b) tracheal antimicrobial peptide (TAP), (c) β-defensin 4, (d) β-defensin 5, (e) β-defensin 10, (f) β-defensin 3, (g) β-defensin 1 V1 (Isoform 1), (h) β-defensin 1V2 (Isoform 2), (i) β-defensin 103 (the confidence key and figure indices provided in the inset of respective figures).