Literature DB >> 28882878

Autoimmune disease variants regulate GSDMB gene expression in human immune cells and whole blood.

Yang Hu1, Shuilin Jin2, Liang Cheng3, Guiyou Liu4, Qinghua Jiang4.   

Abstract

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Year:  2017        PMID： 28882878      PMCID： PMC5617311          DOI： 10.1073/pnas.1712127114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  10 in total

1.  Gene polymorphism linked to increased asthma and IBD risk alters gasdermin-B structure, a sulfatide and phosphoinositide binding protein.

Authors:  Kinlin L Chao; Liudmila Kulakova; Osnat Herzberg
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-01       Impact factor: 11.205

2.  Expression quantitative trait loci regulate HNF4A and PTBP1 expression in human brains.

Authors:  Guiyou Liu; Xinjie Bao; Renzhi Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-29       Impact factor: 11.205

3.  The Genetic Architecture of Gene Expression in Peripheral Blood.

Authors:  Luke R Lloyd-Jones; Alexander Holloway; Allan McRae; Jian Yang; Kerrin Small; Jing Zhao; Biao Zeng; Andrew Bakshi; Andres Metspalu; Manolis Dermitzakis; Greg Gibson; Tim Spector; Grant Montgomery; Tonu Esko; Peter M Visscher; Joseph E Powell
Journal:  Am J Hum Genet       Date:  2017-01-05       Impact factor: 11.025

4.  Genetic variant rs763361 regulates multiple sclerosis CD226 gene expression.

Authors:  Guiyou Liu; Yang Hu; Shuilin Jin; Qinghua Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-30       Impact factor: 11.205

5.  Identification of context-dependent expression quantitative trait loci in whole blood.

Authors:  Daria V Zhernakova; Patrick Deelen; Martijn Vermaat; Maarten van Iterson; Michiel van Galen; Wibowo Arindrarto; Peter van 't Hof; Hailiang Mei; Freerk van Dijk; Harm-Jan Westra; Marc Jan Bonder; Jeroen van Rooij; Marijn Verkerk; P Mila Jhamai; Matthijs Moed; Szymon M Kielbasa; Jan Bot; Irene Nooren; René Pool; Jenny van Dongen; Jouke J Hottenga; Coen D A Stehouwer; Carla J H van der Kallen; Casper G Schalkwijk; Alexandra Zhernakova; Yang Li; Ettje F Tigchelaar; Niek de Klein; Marian Beekman; Joris Deelen; Diana van Heemst; Leonard H van den Berg; Albert Hofman; André G Uitterlinden; Marleen M J van Greevenbroek; Jan H Veldink; Dorret I Boomsma; Cornelia M van Duijn; Cisca Wijmenga; P Eline Slagboom; Morris A Swertz; Aaron Isaacs; Joyce B J van Meurs; Rick Jansen; Bastiaan T Heijmans; Peter A C 't Hoen; Lude Franke
Journal:  Nat Genet       Date:  2016-12-05       Impact factor: 38.330

6.  Cis-eQTLs regulate reduced LST1 gene and NCR3 gene expression and contribute to increased autoimmune disease risk.

Authors:  Guiyou Liu; Yang Hu; Shuilin Jin; Fang Zhang; Qinghua Jiang; Junwei Hao
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-11       Impact factor: 11.205

7.  Integrated genome-wide analysis of expression quantitative trait loci aids interpretation of genomic association studies.

Authors:  Roby Joehanes; Xiaoling Zhang; Tianxiao Huan; Chen Yao; Sai-Xia Ying; Quang Tri Nguyen; Cumhur Yusuf Demirkale; Michael L Feolo; Nataliya R Sharopova; Anne Sturcke; Alejandro A Schäffer; Nancy Heard-Costa; Han Chen; Po-Ching Liu; Richard Wang; Kimberly A Woodhouse; Kahraman Tanriverdi; Jane E Freedman; Nalini Raghavachari; Josée Dupuis; Andrew D Johnson; Christopher J O'Donnell; Daniel Levy; Peter J Munson
Journal:  Genome Biol       Date:  2017-01-25       Impact factor: 13.583

8.  Pathogenic implications for autoimmune mechanisms derived by comparative eQTL analysis of CD4+ versus CD8+ T cells.

Authors:  Silva Kasela; Kai Kisand; Liina Tserel; Epp Kaleviste; Anu Remm; Krista Fischer; Tõnu Esko; Harm-Jan Westra; Benjamin P Fairfax; Seiko Makino; Julian C Knight; Lude Franke; Andres Metspalu; Pärt Peterson; Lili Milani
Journal:  PLoS Genet       Date:  2017-03-01       Impact factor: 5.917

9.  Systematic identification of trans eQTLs as putative drivers of known disease associations.

Authors:  Harm-Jan Westra; Marjolein J Peters; Tõnu Esko; Hanieh Yaghootkar; Claudia Schurmann; Johannes Kettunen; Mark W Christiansen; Bruce M Psaty; Samuli Ripatti; Alexander Teumer; Timothy M Frayling; Andres Metspalu; Joyce B J van Meurs; Lude Franke; Benjamin P Fairfax; Katharina Schramm; Joseph E Powell; Alexandra Zhernakova; Daria V Zhernakova; Jan H Veldink; Leonard H Van den Berg; Juha Karjalainen; Sebo Withoff; André G Uitterlinden; Albert Hofman; Fernando Rivadeneira; Peter A C 't Hoen; Eva Reinmaa; Krista Fischer; Mari Nelis; Lili Milani; David Melzer; Luigi Ferrucci; Andrew B Singleton; Dena G Hernandez; Michael A Nalls; Georg Homuth; Matthias Nauck; Dörte Radke; Uwe Völker; Markus Perola; Veikko Salomaa; Jennifer Brody; Astrid Suchy-Dicey; Sina A Gharib; Daniel A Enquobahrie; Thomas Lumley; Grant W Montgomery; Seiko Makino; Holger Prokisch; Christian Herder; Michael Roden; Harald Grallert; Thomas Meitinger; Konstantin Strauch; Yang Li; Ritsert C Jansen; Peter M Visscher; Julian C Knight
Journal:  Nat Genet       Date:  2013-09-08       Impact factor: 38.330

10.  Integrative genomic deconvolution of rheumatoid arthritis GWAS loci into gene and cell type associations.

Authors:  Alice M Walsh; John W Whitaker; C Chris Huang; Yauheniya Cherkas; Sarah L Lamberth; Carrie Brodmerkel; Mark E Curran; Radu Dobrin
Journal:  Genome Biol       Date:  2016-04-30       Impact factor: 13.583
  10 in total
  16 in total

1.  rs1769793 variant reduces EGLN1 expression in skeletal muscle and hippocampus and contributes to high aerobic capacity in hypoxia.

Authors:  Guiyou Liu; Wenbo Zhao; Haihua Zhang; Tao Wang; Zhifa Han; Xunming Ji
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-27       Impact factor: 11.205

2.  Reply to HU et al.: On the interpretation of gasdermin-B expression quantitative trait loci data.

Authors:  Lipika R Pal; Kinlin L Chao; John Moult; Osnat Herzberg
Journal:  Proc Natl Acad Sci U S A       Date:  2017-09-07       Impact factor: 11.205

3.  Rs2293871 regulates HTRA1 expression and affects cerebral small vessel stroke and Alzheimer's disease.

Authors:  Guiyou Liu; Haihua Zhang; Bian Liu; Xunming Ji
Journal:  Brain       Date:  2019-11-01       Impact factor: 13.501

Review 4.  Pyroptosis: Role and Mechanisms in Cardiovascular Disease.

Authors:  Xinzhe Chen; Peng-Chao Tian; Kai Wang; Man Wang; Kun Wang
Journal:  Front Cardiovasc Med       Date:  2022-05-11

5.  Chromosome 17q12-21 Variants Are Associated with Multiple Wheezing Phenotypes in Childhood.

Authors:  Brian Hallmark; Ganesa Wegienka; Suzanne Havstad; Dean Billheimer; Dennis Ownby; Eneida A Mendonca; Lisa Gress; Debra A Stern; Jocelyn Biagini Myers; Gurjit K Khurana Hershey; Lori Hoepner; Rachel L Miller; Robert F Lemanske; Daniel J Jackson; Diane R Gold; George T O'Connor; Dan L Nicolae; James E Gern; Carole Ober; Anne L Wright; Fernando D Martinez
Journal:  Am J Respir Crit Care Med       Date:  2021-04-01       Impact factor: 21.405

6.  rs34331204 regulates TSPAN13 expression and contributes to Alzheimer's disease with sex differences.

Authors:  Yang Hu; Haihua Zhang; Bian Liu; Shan Gao; Tao Wang; Zhifa Han; Xunming Ji; Guiyou Liu
Journal:  Brain       Date:  2020-12-05       Impact factor: 15.255

7.  GLRB variants regulate nearby gene expression in human brain tissues.

Authors:  Qing-Jian Wu; Ming-Feng Yang; Pi-da Hao; Cheng-Jun Yan; Chun-Jing Du; Han-Xia Li; Ya-Jun Hou; Bao-Liang Sun; Shu-Yin Sun
Journal:  Sci Rep       Date:  2017-10-17       Impact factor: 4.379

8.  Bacterial and viral pathogen-associated molecular patterns induce divergent early transcriptomic landscapes in a bovine macrophage cell line.

Authors:  Felix N Toka; Kiera Dunaway; Felicia Smaltz; Lidia Szulc-Dąbrowska; Jenny Drnevich; Matylda Barbara Mielcarska; Magdalena Bossowska-Nowicka; Matthias Schweizer
Journal:  BMC Genomics       Date:  2019-01-08       Impact factor: 3.969

9.  Mitochondrial ROS promote macrophage pyroptosis by inducing GSDMD oxidation.

Authors:  Yufang Wang; Peiliang Shi; Qin Chen; Zan Huang; Dayuan Zou; Jingzi Zhang; Xiang Gao; Zhaoyu Lin
Journal:  J Mol Cell Biol       Date:  2019-12-19       Impact factor: 6.216

10.  Genetic Variant rs755622 Regulates Expression of the Multiple Sclerosis Severity Modifier D-Dopachrome Tautomerase in a Sex-Specific Way.

Authors:  Zhijie Han; Jiaojiao Qu; Jiehong Zhao; Xiao Zou
Journal:  Biomed Res Int       Date:  2018-07-24       Impact factor: 3.411
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